RNA–Protein interactions for RNA: ENST00000489698.1

COPS9-203, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-203ENST00000489698 NISCHQ9Y2I1 1504 aa59.85■■■■■ 7.17
COPS9-203ENST00000489698 ABCC9O60706 1549 aa53.55■■■■■ 6.16
COPS9-203ENST00000489698 CCDC180Q9P1Z9 1646 aa53.43■■■■■ 6.14
COPS9-203ENST00000489698 RB1CC1Q8TDY2 1594 aa50.78■■■■■ 5.72
COPS9-203ENST00000489698 DNAJC5BQ9UF47 199 aa50.53■■■■■ 5.68
COPS9-203ENST00000489698 DCAF8L2P0C7V8 631 aa50.5■■■■■ 5.67
COPS9-203ENST00000489698 NACADO15069 1562 aa50.41■■■■■ 5.66
COPS9-203ENST00000489698 MYO15BQ96JP2 1530 aa49.81■■■■■ 5.56
COPS9-203ENST00000489698 PABPN1Q86U42 306 aaKnown RBP eCLIP49.78■■■■■ 5.56
COPS9-203ENST00000489698 ZCCHC6Q5VYS8 1495 aaKnown RBP49.69■■■■■ 5.54
COPS9-203ENST00000489698 UNC13AQ9UPW8 1703 aa49.68■■■■■ 5.54
COPS9-203ENST00000489698 DCAF1Q9Y4B6 1507 aa49.39■■■■■ 5.5
COPS9-203ENST00000489698 BICRAQ9NZM4 1560 aa49.32■■■■■ 5.49
COPS9-203ENST00000489698 SCRIBQ14160 1630 aa48.83■■■■■ 5.41
COPS9-203ENST00000489698 SHROOM4Q9ULL8 1493 aa48.58■■■■■ 5.37
COPS9-203ENST00000489698 CC2D2AQ9P2K1 1620 aa48.36■■■■■ 5.33
COPS9-203ENST00000489698 CECR2Q9BXF3 1484 aa48.27■■■■■ 5.32
COPS9-203ENST00000489698 EIF4G1Q04637 1599 aaKnown RBP48.15■■■■■ 5.3
COPS9-203ENST00000489698 DNAJC5Q9H3Z4 198 aa46.66■■■■■ 5.06
COPS9-203ENST00000489698 SMARCA4P51532 1647 aa46.57■■■■■ 5.05
COPS9-203ENST00000489698 NCAPD3P42695 1498 aa46.52■■■■■ 5.04
COPS9-203ENST00000489698 ATAD2BQ9ULI0 1458 aa46.49■■■■■ 5.03
COPS9-203ENST00000489698 BAZ1AQ9NRL2 1556 aaPredicted RBP46.42■■■■■ 5.02
COPS9-203ENST00000489698 SMARCA2P51531 1590 aa46.38■■■■■ 5.01
COPS9-203ENST00000489698 CUX2O14529 1486 aa46.28■■■■■ 5
COPS9-203ENST00000489698 ERCC6Q03468 1493 aa46.28■■■■■ 5
COPS9-203ENST00000489698 HMGXB3Q12766 1538 aa46.21■■■■■ 4.99
COPS9-203ENST00000489698 MROH2BQ7Z745 1585 aa46.14■■■■■ 4.98
COPS9-203ENST00000489698 BAZ1BQ9UIG0 1483 aaKnown RBP46.1■■■■■ 4.97
COPS9-203ENST00000489698 PEG3Q9GZU2 1588 aa46.05■■■■■ 4.96
COPS9-203ENST00000489698 NESP48681 1621 aa45.89■■■■■ 4.94
COPS9-203ENST00000489698 WIZO95785 1651 aa45.64■■■■■ 4.9
COPS9-203ENST00000489698 THOC2Q8NI27 1593 aaKnown RBP45.51■■■■■ 4.88
COPS9-203ENST00000489698 LAMC3Q9Y6N6 1575 aa45.49■■■■■ 4.87
COPS9-203ENST00000489698 RSF1Q96T23 1441 aaPredicted RBP45.38■■■■■ 4.86
COPS9-203ENST00000489698 KIF21AQ7Z4S6 1674 aa45.31■■■■■ 4.84
COPS9-203ENST00000489698 PDS5BQ9NTI5 1447 aa45.23■■■■■ 4.83
COPS9-203ENST00000489698 CADPSQ9ULU8 1353 aa45.18■■■■■ 4.82
COPS9-203ENST00000489698 TOP2AP11388 1531 aaKnown RBP45.06■■■■■ 4.8
COPS9-203ENST00000489698 MRC2Q9UBG0 1479 aa44.88■■■■■ 4.78
COPS9-203ENST00000489698 WDR62O43379 1518 aa44.79■■■■■ 4.76
COPS9-203ENST00000489698 CFTRP13569 1480 aa44.74■■■■■ 4.75
COPS9-203ENST00000489698 FANCD2Q9BXW9 1451 aa44.67■■■■■ 4.74
COPS9-203ENST00000489698 CEP164Q9UPV0 1460 aa44.67■■■■■ 4.74
COPS9-203ENST00000489698 CCDC88BA6NC98 1476 aa44.58■■■■■ 4.73
COPS9-203ENST00000489698 TRIM41Q8WV44 630 aa44.53■■■■■ 4.72
COPS9-203ENST00000489698 PRDM2Q13029 1718 aa44.36■■■■■ 4.69
COPS9-203ENST00000489698 URB2Q14146 1524 aaKnown RBP44.25■■■■■ 4.67
COPS9-203ENST00000489698 OSCARQ8IYS5 282 aa44.08■■■■■ 4.65
COPS9-203ENST00000489698 SUPT5HO00267 1087 aaKnown RBP43.93■■■■■ 4.62
COPS9-203ENST00000489698 TOPBP1Q92547 1522 aa43.88■■■■■ 4.61
COPS9-203ENST00000489698 ABCC8Q09428 1581 aa43.8■■■■■ 4.6
COPS9-203ENST00000489698 DNMBPQ6XZF7 1577 aa43.75■■■■■ 4.59
COPS9-203ENST00000489698 IFT140Q96RY7 1462 aa43.75■■■■■ 4.59
COPS9-203ENST00000489698 ZNF608Q9ULD9 1512 aaPredicted RBP43.73■■■■■ 4.59
COPS9-203ENST00000489698 RIMBP3CA6NJZ7 1639 aa43.62■■■■■ 4.57
COPS9-203ENST00000489698 RIMBP3BA6NNM3 1639 aa43.62■■■■■ 4.57
COPS9-203ENST00000489698 RIMBP3Q9UFD9 1639 aa43.62■■■■■ 4.57
COPS9-203ENST00000489698 EIF4G3O43432 1585 aaKnown RBP43.5■■■■■ 4.55
COPS9-203ENST00000489698 POLA1P09884 1462 aaPredicted RBP43.46■■■■■ 4.55
COPS9-203ENST00000489698 ARHGEF11O15085 1522 aa43.43■■■■■ 4.54
COPS9-203ENST00000489698 TARBP1Q13395 1621 aaKnown RBP43.42■■■■■ 4.54
COPS9-203ENST00000489698 AQRO60306 1485 aaKnown RBP eCLIP43.34■■■■■ 4.53
COPS9-203ENST00000489698 RAD54L2Q9Y4B4 1467 aa43.34■■■■■ 4.53
COPS9-203ENST00000489698 CUX1P39880 1505 aa43.32■■■■■ 4.52
COPS9-203ENST00000489698 SOGA1O94964 1423 aa43.31■■■■■ 4.52
COPS9-203ENST00000489698 FGD5Q6ZNL6 1462 aa43.29■■■■■ 4.52
COPS9-203ENST00000489698 CHD1O14646 1710 aa43.26■■■■■ 4.52
COPS9-203ENST00000489698 TDRD9Q8NDG6 1382 aaKnown RBP43.18■■■■■ 4.5
COPS9-203ENST00000489698 CYB5RLQ6IPT4 315 aa43.11■■■■■ 4.49
COPS9-203ENST00000489698 FBLN2P98095 1184 aa43.09■■■■■ 4.49
COPS9-203ENST00000489698 WDR97A6NE52 1622 aa42.98■■■■■ 4.47
COPS9-203ENST00000489698 ARAP1Q96P48 1450 aa42.97■■■■■ 4.47
COPS9-203ENST00000489698 SNAPC4Q5SXM2 1469 aa42.9■■■■■ 4.46
COPS9-203ENST00000489698 GRIN2BQ13224 1484 aa42.85■■■■■ 4.45
COPS9-203ENST00000489698 WRNQ14191 1432 aaPredicted RBP eCLIP42.82■■■■■ 4.45
COPS9-203ENST00000489698 ABCA10Q8WWZ4 1543 aa42.79■■■■■ 4.44
COPS9-203ENST00000489698 TRHP20396 242 aaPredicted RBP42.78■■■■■ 4.44
COPS9-203ENST00000489698 CHMP7Q8WUX9 453 aaPredicted RBP42.78■■■■■ 4.44
COPS9-203ENST00000489698 GAPVD1Q14C86 1478 aa42.78■■■■■ 4.44
COPS9-203ENST00000489698 MAGI1Q96QZ7 1491 aaPredicted RBP42.77■■■■■ 4.44
COPS9-203ENST00000489698 TOP2BQ02880 1626 aa42.75■■■■■ 4.43
COPS9-203ENST00000489698 BIVM-ERCC5R4GMW8 1640 aa42.75■■■■■ 4.43
COPS9-203ENST00000489698 SYNJ1O43426 1573 aa42.74■■■■■ 4.43
COPS9-203ENST00000489698 PBRM1Q86U86 1689 aa42.73■■■■■ 4.43
COPS9-203ENST00000489698 CLASP1Q7Z460 1538 aa42.71■■■■■ 4.43
COPS9-203ENST00000489698 ABCA5Q8WWZ7 1642 aa42.67■■■■■ 4.42
COPS9-203ENST00000489698 SYNJ2O15056 1496 aa42.63■■■■■ 4.42
COPS9-203ENST00000489698 ADAMTS12P58397 1594 aa42.32■■■■■ 4.37
COPS9-203ENST00000489698 GRIN2AQ12879 1464 aa42.29■■■■■ 4.36
COPS9-203ENST00000489698 ERICH3Q5RHP9 1530 aa42.26■■■■■ 4.36
COPS9-203ENST00000489698 FHAD1B1AJZ9 1412 aa42.25■■■■■ 4.35
COPS9-203ENST00000489698 CEP170Q5SW79 1584 aa42.12■■■■■ 4.33
COPS9-203ENST00000489698 NUP160Q12769 1436 aa42.1■■■■■ 4.33
COPS9-203ENST00000489698 ERCC6L2Q5T890 1561 aa42.05■■■■■ 4.32
COPS9-203ENST00000489698 KIF27Q86VH2 1401 aa41.98■■■■■ 4.31
COPS9-203ENST00000489698 IGF1RP08069 1367 aa41.88■■■■■ 4.3
COPS9-203ENST00000489698 SHROOM2Q13796 1616 aa41.84■■■■■ 4.29
COPS9-203ENST00000489698 AEBP2Q6ZN18 517 aaPredicted RBP41.81■■■■■ 4.28
COPS9-203ENST00000489698 CUL7Q14999 1698 aa41.77■■■■■ 4.28
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms