Protein–RNA interactions for Protein: Q8TDP1

RNASEH2C, Ribonuclease H2 subunit C, humanhuman

Known RBP Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH2CQ8TDP1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNASEH2CQ8TDP1 ST7-AS1-201ENST00000456775 1889 ntBASIC21.17■□□□□ 0.98
RNASEH2CQ8TDP1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.17■□□□□ 0.98
RNASEH2CQ8TDP1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RNASEH2CQ8TDP1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNASEH2CQ8TDP1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNASEH2CQ8TDP1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNASEH2CQ8TDP1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNASEH2CQ8TDP1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RNASEH2CQ8TDP1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNASEH2CQ8TDP1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNASEH2CQ8TDP1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNASEH2CQ8TDP1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNASEH2CQ8TDP1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNASEH2CQ8TDP1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNASEH2CQ8TDP1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNASEH2CQ8TDP1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNASEH2CQ8TDP1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNASEH2CQ8TDP1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNASEH2CQ8TDP1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.12■□□□□ 0.97
RNASEH2CQ8TDP1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNASEH2CQ8TDP1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNASEH2CQ8TDP1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
RNASEH2CQ8TDP1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNASEH2CQ8TDP1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNASEH2CQ8TDP1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.08■□□□□ 0.96
RNASEH2CQ8TDP1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNASEH2CQ8TDP1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNASEH2CQ8TDP1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNASEH2CQ8TDP1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNASEH2CQ8TDP1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNASEH2CQ8TDP1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNASEH2CQ8TDP1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.05■□□□□ 0.96
RNASEH2CQ8TDP1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNASEH2CQ8TDP1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNASEH2CQ8TDP1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNASEH2CQ8TDP1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNASEH2CQ8TDP1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNASEH2CQ8TDP1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.04■□□□□ 0.96
RNASEH2CQ8TDP1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNASEH2CQ8TDP1 AL135925.1-201ENST00000605920 1701 ntBASIC21.04■□□□□ 0.96
RNASEH2CQ8TDP1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.03■□□□□ 0.96
RNASEH2CQ8TDP1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNASEH2CQ8TDP1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNASEH2CQ8TDP1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNASEH2CQ8TDP1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNASEH2CQ8TDP1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNASEH2CQ8TDP1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNASEH2CQ8TDP1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21■□□□□ 0.95
RNASEH2CQ8TDP1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RNASEH2CQ8TDP1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNASEH2CQ8TDP1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNASEH2CQ8TDP1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNASEH2CQ8TDP1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
RNASEH2CQ8TDP1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNASEH2CQ8TDP1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNASEH2CQ8TDP1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNASEH2CQ8TDP1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNASEH2CQ8TDP1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNASEH2CQ8TDP1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNASEH2CQ8TDP1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.98■□□□□ 0.95
RNASEH2CQ8TDP1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RNASEH2CQ8TDP1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNASEH2CQ8TDP1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNASEH2CQ8TDP1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNASEH2CQ8TDP1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.97■□□□□ 0.95
RNASEH2CQ8TDP1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.97■□□□□ 0.95
RNASEH2CQ8TDP1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.96■□□□□ 0.95
RNASEH2CQ8TDP1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.96■□□□□ 0.95
RNASEH2CQ8TDP1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.96■□□□□ 0.95
RNASEH2CQ8TDP1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNASEH2CQ8TDP1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNASEH2CQ8TDP1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNASEH2CQ8TDP1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNASEH2CQ8TDP1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RNASEH2CQ8TDP1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.94■□□□□ 0.94
RNASEH2CQ8TDP1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNASEH2CQ8TDP1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.94■□□□□ 0.94
RNASEH2CQ8TDP1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNASEH2CQ8TDP1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNASEH2CQ8TDP1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNASEH2CQ8TDP1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.93■□□□□ 0.94
RNASEH2CQ8TDP1 WASH5P-204ENST00000632292 975 ntBASIC20.93■□□□□ 0.94
RNASEH2CQ8TDP1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.93■□□□□ 0.94
RNASEH2CQ8TDP1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.92■□□□□ 0.94
RNASEH2CQ8TDP1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNASEH2CQ8TDP1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNASEH2CQ8TDP1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNASEH2CQ8TDP1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNASEH2CQ8TDP1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNASEH2CQ8TDP1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNASEH2CQ8TDP1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNASEH2CQ8TDP1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNASEH2CQ8TDP1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNASEH2CQ8TDP1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
RNASEH2CQ8TDP1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
RNASEH2CQ8TDP1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNASEH2CQ8TDP1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNASEH2CQ8TDP1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.89■□□□□ 0.93
RNASEH2CQ8TDP1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms