Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SLC17A8Q8NDX2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SLC17A8Q8NDX2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
SLC17A8Q8NDX2 AC005559.1-201ENST00000589661 871 ntBASIC30.07■■■□□ 2.4
SLC17A8Q8NDX2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SLC17A8Q8NDX2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
SLC17A8Q8NDX2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SLC17A8Q8NDX2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SLC17A8Q8NDX2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SLC17A8Q8NDX2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SLC17A8Q8NDX2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
SLC17A8Q8NDX2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
SLC17A8Q8NDX2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SLC17A8Q8NDX2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.01■■■□□ 2.39
SLC17A8Q8NDX2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SLC17A8Q8NDX2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30■■■□□ 2.39
SLC17A8Q8NDX2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30■■■□□ 2.39
SLC17A8Q8NDX2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
SLC17A8Q8NDX2 MIR762-201ENST00000390236 83 ntBASIC29.99■■■□□ 2.39
SLC17A8Q8NDX2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
SLC17A8Q8NDX2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.97■■■□□ 2.39
SLC17A8Q8NDX2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SLC17A8Q8NDX2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SLC17A8Q8NDX2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.96■■■□□ 2.39
SLC17A8Q8NDX2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.95■■■□□ 2.39
SLC17A8Q8NDX2 WASH5P-204ENST00000632292 975 ntBASIC29.95■■■□□ 2.39
SLC17A8Q8NDX2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.94■■■□□ 2.38
SLC17A8Q8NDX2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SLC17A8Q8NDX2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SLC17A8Q8NDX2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SLC17A8Q8NDX2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
SLC17A8Q8NDX2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SLC17A8Q8NDX2 AC016575.1-201ENST00000607026 382 ntBASIC29.89■■■□□ 2.38
SLC17A8Q8NDX2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
SLC17A8Q8NDX2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
SLC17A8Q8NDX2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.88■■■□□ 2.37
SLC17A8Q8NDX2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SLC17A8Q8NDX2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SLC17A8Q8NDX2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.87■■■□□ 2.37
SLC17A8Q8NDX2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SLC17A8Q8NDX2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SLC17A8Q8NDX2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SLC17A8Q8NDX2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SLC17A8Q8NDX2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SLC17A8Q8NDX2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
SLC17A8Q8NDX2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
SLC17A8Q8NDX2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SLC17A8Q8NDX2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SLC17A8Q8NDX2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SLC17A8Q8NDX2 DUX4L29-201ENST00000425409 679 ntBASIC29.81■■■□□ 2.36
SLC17A8Q8NDX2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.81■■■□□ 2.36
SLC17A8Q8NDX2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
SLC17A8Q8NDX2 MIR3648-2-201ENST00000581792 180 ntBASIC29.81■■■□□ 2.36
SLC17A8Q8NDX2 MIR3648-1-201ENST00000615959 180 ntBASIC29.81■■■□□ 2.36
SLC17A8Q8NDX2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SLC17A8Q8NDX2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SLC17A8Q8NDX2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SLC17A8Q8NDX2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.79■■■□□ 2.36
SLC17A8Q8NDX2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SLC17A8Q8NDX2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SLC17A8Q8NDX2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SLC17A8Q8NDX2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SLC17A8Q8NDX2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.77■■■□□ 2.36
SLC17A8Q8NDX2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SLC17A8Q8NDX2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
SLC17A8Q8NDX2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.74■■■□□ 2.35
SLC17A8Q8NDX2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
SLC17A8Q8NDX2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.72■■■□□ 2.35
SLC17A8Q8NDX2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
SLC17A8Q8NDX2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SLC17A8Q8NDX2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
SLC17A8Q8NDX2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SLC17A8Q8NDX2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SLC17A8Q8NDX2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SLC17A8Q8NDX2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SLC17A8Q8NDX2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.68■■■□□ 2.34
SLC17A8Q8NDX2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SLC17A8Q8NDX2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SLC17A8Q8NDX2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SLC17A8Q8NDX2 AC019069.1-201ENST00000610008 1333 ntBASIC29.66■■■□□ 2.34
SLC17A8Q8NDX2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.65■■■□□ 2.34
SLC17A8Q8NDX2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.64■■■□□ 2.34
SLC17A8Q8NDX2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.64■■■□□ 2.34
SLC17A8Q8NDX2 ABHD17AP5-201ENST00000580133 923 ntBASIC29.63■■■□□ 2.33
SLC17A8Q8NDX2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.62■■■□□ 2.33
SLC17A8Q8NDX2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
SLC17A8Q8NDX2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.62■■■□□ 2.33
SLC17A8Q8NDX2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SLC17A8Q8NDX2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.62■■■□□ 2.33
SLC17A8Q8NDX2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.61■■■□□ 2.33
SLC17A8Q8NDX2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.61■■■□□ 2.33
SLC17A8Q8NDX2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
SLC17A8Q8NDX2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.61■■■□□ 2.33
SLC17A8Q8NDX2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.61■■■□□ 2.33
SLC17A8Q8NDX2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SLC17A8Q8NDX2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SLC17A8Q8NDX2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
SLC17A8Q8NDX2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.59■■■□□ 2.33
SLC17A8Q8NDX2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
SLC17A8Q8NDX2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.56■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms