Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RPP38P78345 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.03■■□□□ 1.6
RPP38P78345 AL391121.1-201ENST00000607967 1349 ntBASIC25.03■■□□□ 1.6
RPP38P78345 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RPP38P78345 AC139426.1-201ENST00000568218 2529 ntBASIC25.02■■□□□ 1.6
RPP38P78345 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RPP38P78345 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25■■□□□ 1.59
RPP38P78345 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25■■□□□ 1.59
RPP38P78345 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RPP38P78345 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.99■■□□□ 1.59
RPP38P78345 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
RPP38P78345 CAHM-201ENST00000604200 896 ntBASIC24.99■■□□□ 1.59
RPP38P78345 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
RPP38P78345 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RPP38P78345 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RPP38P78345 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.98■■□□□ 1.59
RPP38P78345 WASH5P-204ENST00000632292 975 ntBASIC24.98■■□□□ 1.59
RPP38P78345 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RPP38P78345 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.97■■□□□ 1.59
RPP38P78345 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RPP38P78345 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
RPP38P78345 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RPP38P78345 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RPP38P78345 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RPP38P78345 SUZ12P1-203ENST00000578195 985 ntBASIC24.95■■□□□ 1.58
RPP38P78345 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
RPP38P78345 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RPP38P78345 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RPP38P78345 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RPP38P78345 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RPP38P78345 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.92■■□□□ 1.58
RPP38P78345 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPP38P78345 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.92■■□□□ 1.58
RPP38P78345 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RPP38P78345 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
RPP38P78345 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.91■■□□□ 1.58
RPP38P78345 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RPP38P78345 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RPP38P78345 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
RPP38P78345 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RPP38P78345 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RPP38P78345 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RPP38P78345 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RPP38P78345 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
RPP38P78345 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RPP38P78345 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RPP38P78345 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
RPP38P78345 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
RPP38P78345 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RPP38P78345 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RPP38P78345 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RPP38P78345 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RPP38P78345 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
RPP38P78345 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
RPP38P78345 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RPP38P78345 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RPP38P78345 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RPP38P78345 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
RPP38P78345 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RPP38P78345 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RPP38P78345 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RPP38P78345 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RPP38P78345 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RPP38P78345 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RPP38P78345 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.77■■□□□ 1.56
RPP38P78345 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.77■■□□□ 1.56
RPP38P78345 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
RPP38P78345 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RPP38P78345 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RPP38P78345 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RPP38P78345 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.76■■□□□ 1.55
RPP38P78345 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RPP38P78345 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RPP38P78345 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RPP38P78345 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
RPP38P78345 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RPP38P78345 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RPP38P78345 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.73■■□□□ 1.55
RPP38P78345 AP006261.1-201ENST00000584783 668 ntBASIC24.73■■□□□ 1.55
RPP38P78345 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RPP38P78345 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
RPP38P78345 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.71■■□□□ 1.55
RPP38P78345 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.71■■□□□ 1.55
RPP38P78345 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.71■■□□□ 1.55
RPP38P78345 ST7-AS1-201ENST00000456775 1889 ntBASIC24.71■■□□□ 1.55
RPP38P78345 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RPP38P78345 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.71■■□□□ 1.55
RPP38P78345 AL161658.1-201ENST00000623641 1967 ntBASIC24.71■■□□□ 1.55
RPP38P78345 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
RPP38P78345 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RPP38P78345 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RPP38P78345 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RPP38P78345 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RPP38P78345 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.68■■□□□ 1.54
RPP38P78345 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RPP38P78345 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RPP38P78345 MIR762-201ENST00000390236 83 ntBASIC24.67■■□□□ 1.54
RPP38P78345 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RPP38P78345 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RPP38P78345 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms