Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBE2D3P61077 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2D3P61077 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2D3P61077 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
UBE2D3P61077 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2D3P61077 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2D3P61077 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2D3P61077 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2D3P61077 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2D3P61077 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2D3P61077 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2D3P61077 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.79■□□□□ 0.6
UBE2D3P61077 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE2D3P61077 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2D3P61077 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2D3P61077 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.77■□□□□ 0.6
UBE2D3P61077 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2D3P61077 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2D3P61077 ST7-AS1-201ENST00000456775 1889 ntBASIC18.77■□□□□ 0.6
UBE2D3P61077 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.76■□□□□ 0.59
UBE2D3P61077 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2D3P61077 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.75■□□□□ 0.59
UBE2D3P61077 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2D3P61077 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.75■□□□□ 0.59
UBE2D3P61077 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2D3P61077 AC135731.1-201ENST00000569415 2548 ntBASIC18.74■□□□□ 0.59
UBE2D3P61077 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2D3P61077 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2D3P61077 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.73■□□□□ 0.59
UBE2D3P61077 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2D3P61077 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2D3P61077 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2D3P61077 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2D3P61077 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2D3P61077 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2D3P61077 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2D3P61077 WASH5P-204ENST00000632292 975 ntBASIC18.71■□□□□ 0.59
UBE2D3P61077 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2D3P61077 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
UBE2D3P61077 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2D3P61077 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBE2D3P61077 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.7■□□□□ 0.58
UBE2D3P61077 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2D3P61077 AL135925.1-201ENST00000605920 1701 ntBASIC18.69■□□□□ 0.58
UBE2D3P61077 AL133380.1-201ENST00000506013 324 ntBASIC18.69■□□□□ 0.58
UBE2D3P61077 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2D3P61077 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2D3P61077 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2D3P61077 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2D3P61077 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2D3P61077 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2D3P61077 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2D3P61077 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2D3P61077 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2D3P61077 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.64■□□□□ 0.58
UBE2D3P61077 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
UBE2D3P61077 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE2D3P61077 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2D3P61077 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2D3P61077 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2D3P61077 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2D3P61077 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2D3P61077 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2D3P61077 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBE2D3P61077 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2D3P61077 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
UBE2D3P61077 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.61■□□□□ 0.57
UBE2D3P61077 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2D3P61077 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2D3P61077 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.61■□□□□ 0.57
UBE2D3P61077 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2D3P61077 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.61■□□□□ 0.57
UBE2D3P61077 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UBE2D3P61077 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UBE2D3P61077 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2D3P61077 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
UBE2D3P61077 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
UBE2D3P61077 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2D3P61077 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2D3P61077 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2D3P61077 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2D3P61077 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
UBE2D3P61077 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2D3P61077 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2D3P61077 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2D3P61077 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2D3P61077 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2D3P61077 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.57■□□□□ 0.56
UBE2D3P61077 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.57■□□□□ 0.56
UBE2D3P61077 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.57■□□□□ 0.56
UBE2D3P61077 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2D3P61077 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2D3P61077 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2D3P61077 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2D3P61077 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.56■□□□□ 0.56
UBE2D3P61077 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2D3P61077 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2D3P61077 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
UBE2D3P61077 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2D3P61077 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms