Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.63■■□□□ 1.05
AP4M1O00189 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
AP4M1O00189 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
AP4M1O00189 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP4M1O00189 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AP4M1O00189 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AP4M1O00189 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.61■■□□□ 1.05
AP4M1O00189 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP4M1O00189 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP4M1O00189 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.6■■□□□ 1.05
AP4M1O00189 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.59■■□□□ 1.05
AP4M1O00189 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.59■■□□□ 1.05
AP4M1O00189 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
AP4M1O00189 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
AP4M1O00189 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP4M1O00189 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP4M1O00189 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.55■■□□□ 1.04
AP4M1O00189 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP4M1O00189 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
AP4M1O00189 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
AP4M1O00189 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP4M1O00189 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.53■■□□□ 1.04
AP4M1O00189 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.53■■□□□ 1.04
AP4M1O00189 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
AP4M1O00189 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.52■■□□□ 1.04
AP4M1O00189 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
AP4M1O00189 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.52■■□□□ 1.04
AP4M1O00189 AL391121.1-201ENST00000607967 1349 ntBASIC21.52■■□□□ 1.03
AP4M1O00189 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
AP4M1O00189 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
AP4M1O00189 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.5■■□□□ 1.03
AP4M1O00189 CAHM-201ENST00000604200 896 ntBASIC21.49■■□□□ 1.03
AP4M1O00189 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP4M1O00189 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP4M1O00189 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
AP4M1O00189 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.48■■□□□ 1.03
AP4M1O00189 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
AP4M1O00189 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
AP4M1O00189 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
AP4M1O00189 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
AP4M1O00189 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
AP4M1O00189 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
AP4M1O00189 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
AP4M1O00189 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
AP4M1O00189 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP4M1O00189 SUZ12P1-203ENST00000578195 985 ntBASIC21.46■■□□□ 1.03
AP4M1O00189 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.03
AP4M1O00189 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
AP4M1O00189 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.45■■□□□ 1.02
AP4M1O00189 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
AP4M1O00189 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
AP4M1O00189 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
AP4M1O00189 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.44■■□□□ 1.02
AP4M1O00189 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.44■■□□□ 1.02
AP4M1O00189 WASH5P-204ENST00000632292 975 ntBASIC21.44■■□□□ 1.02
AP4M1O00189 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
AP4M1O00189 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
AP4M1O00189 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.43■■□□□ 1.02
AP4M1O00189 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
AP4M1O00189 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
AP4M1O00189 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.42■■□□□ 1.02
AP4M1O00189 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
AP4M1O00189 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
AP4M1O00189 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
AP4M1O00189 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.41■■□□□ 1.02
AP4M1O00189 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
AP4M1O00189 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
AP4M1O00189 AC120057.4-201ENST00000624722 1615 ntBASIC21.4■■□□□ 1.02
AP4M1O00189 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP4M1O00189 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP4M1O00189 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
AP4M1O00189 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
AP4M1O00189 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
AP4M1O00189 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.38■■□□□ 1.01
AP4M1O00189 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP4M1O00189 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
AP4M1O00189 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
AP4M1O00189 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
AP4M1O00189 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP4M1O00189 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP4M1O00189 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.35■■□□□ 1.01
AP4M1O00189 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.35■■□□□ 1.01
AP4M1O00189 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP4M1O00189 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP4M1O00189 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
AP4M1O00189 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP4M1O00189 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
AP4M1O00189 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
AP4M1O00189 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
AP4M1O00189 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
AP4M1O00189 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.33■■□□□ 1
AP4M1O00189 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
AP4M1O00189 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
AP4M1O00189 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.31■■□□□ 1
AP4M1O00189 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP4M1O00189 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.3■■□□□ 1
AP4M1O00189 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.29■■□□□ 1
AP4M1O00189 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
AP4M1O00189 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
AP4M1O00189 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms