Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPCS1Q9Y6A9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 AC116562.4-201ENST00000641316 2276 ntBASIC14.52□□□□□ -0.09
SPCS1Q9Y6A9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 AC110285.7-201ENST00000624417 1536 ntBASIC14.51□□□□□ -0.09
SPCS1Q9Y6A9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 AC087742.1-201ENST00000575880 1738 ntBASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPCS1Q9Y6A9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 AP005212.1-201ENST00000581547 1997 ntBASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 AC007613.1-201ENST00000572811 2597 ntBASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPCS1Q9Y6A9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms