Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LYSMD2Q8IV50 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LYSMD2Q8IV50 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
LYSMD2Q8IV50 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.52■□□□□ 0.55
LYSMD2Q8IV50 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 AC112907.3-201ENST00000577781 2400 ntBASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 AC026471.6-201ENST00000622954 1905 ntBASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 AC116562.4-201ENST00000641316 2276 ntBASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD2Q8IV50 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 TNXA-203ENST00000507684 2038 ntBASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 AC104564.3-201ENST00000582367 638 ntBASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD2Q8IV50 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 AC004408.2-201ENST00000623613 2777 ntBASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 AP000974.1-201ENST00000623909 2387 ntBASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 C17orf82-201ENST00000623772 1530 ntBASIC18.49■□□□□ 0.55
LYSMD2Q8IV50 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 AC006128.1-201ENST00000624704 1661 ntBASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 U85056.1-201ENST00000616429 682 ntBASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD2Q8IV50 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD2Q8IV50 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms