RNA–Protein interactions for RNA: ENST00000613716.4

CBWD6-213, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene CBWD6, Length 1,820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-213ENST00000613716 NISCHQ9Y2I1 1504 aa49.16■■■■■ 5.46
CBWD6-213ENST00000613716 CCDC180Q9P1Z9 1646 aa42.91■■■■■ 4.46
CBWD6-213ENST00000613716 ZCCHC6Q5VYS8 1495 aaKnown RBP41.2■■■■■ 4.19
CBWD6-213ENST00000613716 ABCC9O60706 1549 aa40.92■■■■■ 4.14
CBWD6-213ENST00000613716 DCAF8L2P0C7V8 631 aa40.9■■■■■ 4.14
CBWD6-213ENST00000613716 DCAF1Q9Y4B6 1507 aa40.62■■■■■ 4.09
CBWD6-213ENST00000613716 MYO15BQ96JP2 1530 aa40.24■■■■■ 4.03
CBWD6-213ENST00000613716 NACADO15069 1562 aa40.1■■■■■ 4.01
CBWD6-213ENST00000613716 SHROOM4Q9ULL8 1493 aa40.01■■■■■ 4
CBWD6-213ENST00000613716 RB1CC1Q8TDY2 1594 aa39.82■■■■□ 3.97
CBWD6-213ENST00000613716 SCRIBQ14160 1630 aa39.47■■■■□ 3.91
CBWD6-213ENST00000613716 UNC13AQ9UPW8 1703 aa38.88■■■■□ 3.82
CBWD6-213ENST00000613716 PABPN1Q86U42 306 aaKnown RBP eCLIP38.61■■■■□ 3.77
CBWD6-213ENST00000613716 BICRAQ9NZM4 1560 aa38.55■■■■□ 3.76
CBWD6-213ENST00000613716 SUPT5HO00267 1087 aaKnown RBP38.45■■■■□ 3.75
CBWD6-213ENST00000613716 CECR2Q9BXF3 1484 aa38.23■■■■□ 3.71
CBWD6-213ENST00000613716 RSF1Q96T23 1441 aaPredicted RBP38.06■■■■□ 3.68
CBWD6-213ENST00000613716 BAZ1AQ9NRL2 1556 aaPredicted RBP37.98■■■■□ 3.67
CBWD6-213ENST00000613716 MROH2BQ7Z745 1585 aa37.96■■■■□ 3.67
CBWD6-213ENST00000613716 SMARCA4P51532 1647 aa37.81■■■■□ 3.64
CBWD6-213ENST00000613716 WIZO95785 1651 aa37.62■■■■□ 3.61
CBWD6-213ENST00000613716 EIF4G1Q04637 1599 aaKnown RBP37.46■■■■□ 3.59
CBWD6-213ENST00000613716 PEG3Q9GZU2 1588 aa37.34■■■■□ 3.57
CBWD6-213ENST00000613716 ATAD2BQ9ULI0 1458 aa37.3■■■■□ 3.56
CBWD6-213ENST00000613716 SMARCA2P51531 1590 aa37.27■■■■□ 3.56
CBWD6-213ENST00000613716 TOP2AP11388 1531 aaKnown RBP37.23■■■■□ 3.55
CBWD6-213ENST00000613716 BAZ1BQ9UIG0 1483 aaKnown RBP37.09■■■■□ 3.53
CBWD6-213ENST00000613716 NCAPD3P42695 1498 aa37.04■■■■□ 3.52
CBWD6-213ENST00000613716 CC2D2AQ9P2K1 1620 aa36.97■■■■□ 3.51
CBWD6-213ENST00000613716 HMGXB3Q12766 1538 aa36.9■■■■□ 3.5
CBWD6-213ENST00000613716 CCDC88BA6NC98 1476 aa36.89■■■■□ 3.5
CBWD6-213ENST00000613716 CHIC1Q5VXU3 224 aa36.63■■■■□ 3.45
CBWD6-213ENST00000613716 DNAJC5BQ9UF47 199 aa36.34■■■■□ 3.41
CBWD6-213ENST00000613716 TRIM41Q8WV44 630 aa36.18■■■■□ 3.38
CBWD6-213ENST00000613716 CFTRP13569 1480 aa36.13■■■■□ 3.37
CBWD6-213ENST00000613716 CADPSQ9ULU8 1353 aa36.11■■■■□ 3.37
CBWD6-213ENST00000613716 ABCC8Q09428 1581 aa36■■■■□ 3.35
CBWD6-213ENST00000613716 WRNQ14191 1432 aaPredicted RBP eCLIP35.86■■■■□ 3.33
CBWD6-213ENST00000613716 NESP48681 1621 aa35.81■■■■□ 3.32
CBWD6-213ENST00000613716 PRDM2Q13029 1718 aa35.81■■■■□ 3.32
CBWD6-213ENST00000613716 LAMC3Q9Y6N6 1575 aa35.79■■■■□ 3.32
CBWD6-213ENST00000613716 FANCD2Q9BXW9 1451 aa35.68■■■■□ 3.3
CBWD6-213ENST00000613716 SYNJ1O43426 1573 aa35.64■■■■□ 3.3
CBWD6-213ENST00000613716 PDS5BQ9NTI5 1447 aa35.61■■■■□ 3.29
CBWD6-213ENST00000613716 TOP2BQ02880 1626 aa35.53■■■■□ 3.28
CBWD6-213ENST00000613716 FAM9AQ8IZU1 332 aaPredicted RBP35.51■■■■□ 3.28
CBWD6-213ENST00000613716 CUX1P39880 1505 aa35.5■■■■□ 3.27
CBWD6-213ENST00000613716 CEP164Q9UPV0 1460 aa35.47■■■■□ 3.27
CBWD6-213ENST00000613716 BIVM-ERCC5R4GMW8 1640 aa35.46■■■■□ 3.27
CBWD6-213ENST00000613716 SOGA1O94964 1423 aa35.32■■■■□ 3.25
CBWD6-213ENST00000613716 KIF21AQ7Z4S6 1674 aa35.31■■■■□ 3.24
CBWD6-213ENST00000613716 DNMBPQ6XZF7 1577 aa35.27■■■■□ 3.24
CBWD6-213ENST00000613716 LOC105371045A0A1W2PR82 267 aa35.25■■■■□ 3.23
CBWD6-213ENST00000613716 TOPBP1Q92547 1522 aa35.24■■■■□ 3.23
CBWD6-213ENST00000613716 EEA1Q15075 1411 aa35.23■■■■□ 3.23
CBWD6-213ENST00000613716 URB2Q14146 1524 aaKnown RBP35.2■■■■□ 3.23
CBWD6-213ENST00000613716 FGD5Q6ZNL6 1462 aa35.18■■■■□ 3.22
CBWD6-213ENST00000613716 RUSC2Q8N2Y8 1516 aa35.18■■■■□ 3.22
CBWD6-213ENST00000613716 ERCC6Q03468 1493 aa35.15■■■■□ 3.22
CBWD6-213ENST00000613716 CSRNP3Q8WYN3 585 aa35.14■■■■□ 3.22
CBWD6-213ENST00000613716 MRC2Q9UBG0 1479 aa35.1■■■■□ 3.21
CBWD6-213ENST00000613716 POLA1P09884 1462 aaPredicted RBP35.04■■■■□ 3.2
CBWD6-213ENST00000613716 EHMT2Q96KQ7 1210 aa35.02■■■■□ 3.2
CBWD6-213ENST00000613716 KIF27Q86VH2 1401 aa35.01■■■■□ 3.19
CBWD6-213ENST00000613716 RAD54L2Q9Y4B4 1467 aa34.95■■■■□ 3.19
CBWD6-213ENST00000613716 CUX2O14529 1486 aa34.95■■■■□ 3.19
CBWD6-213ENST00000613716 WDR62O43379 1518 aa34.88■■■■□ 3.17
CBWD6-213ENST00000613716 ABCA10Q8WWZ4 1543 aa34.87■■■■□ 3.17
CBWD6-213ENST00000613716 THOC2Q8NI27 1593 aaKnown RBP34.78■■■■□ 3.16
CBWD6-213ENST00000613716 IGF1RP08069 1367 aa34.72■■■■□ 3.15
CBWD6-213ENST00000613716 UBTFP17480 764 aaKnown RBP34.71■■■■□ 3.15
CBWD6-213ENST00000613716 GOLGA3Q08378 1498 aa34.71■■■■□ 3.15
CBWD6-213ENST00000613716 KIF21BO75037 1637 aa34.7■■■■□ 3.15
CBWD6-213ENST00000613716 TDRD9Q8NDG6 1382 aaKnown RBP34.69■■■■□ 3.14
CBWD6-213ENST00000613716 TARBP1Q13395 1621 aaKnown RBP34.68■■■■□ 3.14
CBWD6-213ENST00000613716 WDR97A6NE52 1622 aa34.66■■■■□ 3.14
CBWD6-213ENST00000613716 IFT140Q96RY7 1462 aa34.65■■■■□ 3.14
CBWD6-213ENST00000613716 PRXQ9BXM0 1461 aa34.64■■■■□ 3.14
CBWD6-213ENST00000613716 RAPGEF2Q9Y4G8 1499 aa34.6■■■■□ 3.13
CBWD6-213ENST00000613716 GAPVD1Q14C86 1478 aa34.59■■■■□ 3.13
CBWD6-213ENST00000613716 TNIKQ9UKE5 1360 aa34.58■■■■□ 3.13
CBWD6-213ENST00000613716 CARMIL1Q5VZK9 1371 aa34.56■■■■□ 3.12
CBWD6-213ENST00000613716 ABCA5Q8WWZ7 1642 aa34.53■■■■□ 3.12
CBWD6-213ENST00000613716 ERICH3Q5RHP9 1530 aa34.53■■■■□ 3.12
CBWD6-213ENST00000613716 AQRO60306 1485 aaKnown RBP eCLIP34.49■■■■□ 3.11
CBWD6-213ENST00000613716 ZNF608Q9ULD9 1512 aaPredicted RBP34.44■■■■□ 3.1
CBWD6-213ENST00000613716 CUL7Q14999 1698 aa34.38■■■■□ 3.09
CBWD6-213ENST00000613716 GRIN2BQ13224 1484 aa34.35■■■■□ 3.09
CBWD6-213ENST00000613716 CEP162Q5TB80 1403 aa34.35■■■■□ 3.09
CBWD6-213ENST00000613716 PBRM1Q86U86 1689 aa34.3■■■■□ 3.08
CBWD6-213ENST00000613716 EIF4G3O43432 1585 aaKnown RBP34.27■■■■□ 3.08
CBWD6-213ENST00000613716 RANGAP1P46060 587 aaPredicted RBP34.22■■■■□ 3.07
CBWD6-213ENST00000613716 FHAD1B1AJZ9 1412 aa34.21■■■■□ 3.07
CBWD6-213ENST00000613716 CLIP1P30622 1438 aa34.17■■■■□ 3.06
CBWD6-213ENST00000613716 SNAPC4Q5SXM2 1469 aa34.12■■■■□ 3.05
CBWD6-213ENST00000613716 ADAMTS12P58397 1594 aa34.11■■■■□ 3.05
CBWD6-213ENST00000613716 MAGI1Q96QZ7 1491 aaPredicted RBP34.07■■■■□ 3.04
CBWD6-213ENST00000613716 CHMP7Q8WUX9 453 aaPredicted RBP34.01■■■■□ 3.03
CBWD6-213ENST00000613716 FBLN2P98095 1184 aa33.96■■■■□ 3.03
CBWD6-213ENST00000613716 SYNJ2O15056 1496 aa33.95■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms