Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH17Q12864 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH17Q12864 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.31■■□□□ 1
CDH17Q12864 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH17Q12864 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH17Q12864 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CDH17Q12864 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH17Q12864 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH17Q12864 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.3■■□□□ 1
CDH17Q12864 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.3■■□□□ 1
CDH17Q12864 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH17Q12864 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.3■■□□□ 1
CDH17Q12864 MIR638-201ENST00000385237 100 ntBASIC21.3■■□□□ 1
CDH17Q12864 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.3■■□□□ 1
CDH17Q12864 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH17Q12864 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.3■■□□□ 1
CDH17Q12864 TPRG1LP1-201ENST00000598702 760 ntBASIC21.3■■□□□ 1
CDH17Q12864 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH17Q12864 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CDH17Q12864 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH17Q12864 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH17Q12864 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CDH17Q12864 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.29■■□□□ 1
CDH17Q12864 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH17Q12864 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CDH17Q12864 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.29■■□□□ 1
CDH17Q12864 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH17Q12864 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH17Q12864 IRS3P-201ENST00000223076 1006 ntBASIC21.29■■□□□ 1
CDH17Q12864 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH17Q12864 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.29■■□□□ 1
CDH17Q12864 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH17Q12864 AC105265.2-201ENST00000467189 838 ntBASIC21.29■■□□□ 1
CDH17Q12864 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.29■■□□□ 1
CDH17Q12864 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.29■■□□□ 1
CDH17Q12864 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDH17Q12864 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
CDH17Q12864 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.29■■□□□ 1
CDH17Q12864 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH17Q12864 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH17Q12864 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.28■■□□□ 1
CDH17Q12864 AL049796.1-201ENST00000565336 1766 ntBASIC21.28■■□□□ 1
CDH17Q12864 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CDH17Q12864 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH17Q12864 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH17Q12864 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.28■■□□□ 1
CDH17Q12864 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.28■■□□□ 1
CDH17Q12864 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.28■■□□□ 1
CDH17Q12864 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.28■■□□□ 1
CDH17Q12864 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDH17Q12864 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDH17Q12864 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH17Q12864 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDH17Q12864 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CDH17Q12864 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH17Q12864 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.27■■□□□ 1
CDH17Q12864 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH17Q12864 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH17Q12864 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH17Q12864 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH17Q12864 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH17Q12864 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.27■■□□□ 1
CDH17Q12864 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH17Q12864 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDH17Q12864 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.27■□□□□ 0.99
CDH17Q12864 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH17Q12864 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH17Q12864 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CDH17Q12864 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.26■□□□□ 0.99
CDH17Q12864 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDH17Q12864 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDH17Q12864 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH17Q12864 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDH17Q12864 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.26■□□□□ 0.99
CDH17Q12864 MIR6084-201ENST00000622012 110 ntBASIC21.26■□□□□ 0.99
CDH17Q12864 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.26■□□□□ 0.99
CDH17Q12864 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH17Q12864 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDH17Q12864 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH17Q12864 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH17Q12864 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH17Q12864 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.25■□□□□ 0.99
CDH17Q12864 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH17Q12864 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.25■□□□□ 0.99
CDH17Q12864 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.25■□□□□ 0.99
CDH17Q12864 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH17Q12864 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH17Q12864 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.24■□□□□ 0.99
CDH17Q12864 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH17Q12864 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.24■□□□□ 0.99
CDH17Q12864 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH17Q12864 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH17Q12864 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH17Q12864 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH17Q12864 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH17Q12864 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH17Q12864 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH17Q12864 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.23■□□□□ 0.99
CDH17Q12864 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH17Q12864 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms