Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.19■■■■□ 3.06
CDH17Q12864 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
CDH17Q12864 AL356512.1-201ENST00000607453 1739 ntBASIC33.55■■■□□ 2.96
CDH17Q12864 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.41■■■□□ 2.94
CDH17Q12864 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.32■■■□□ 2.92
CDH17Q12864 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.18■■■□□ 2.9
CDH17Q12864 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDH17Q12864 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.99■■■□□ 2.87
CDH17Q12864 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CDH17Q12864 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.67■■■□□ 2.82
CDH17Q12864 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.6■■■□□ 2.81
CDH17Q12864 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.39■■■□□ 2.78
CDH17Q12864 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
CDH17Q12864 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CDH17Q12864 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.01■■■□□ 2.72
CDH17Q12864 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.78■■■□□ 2.68
CDH17Q12864 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CDH17Q12864 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.76■■■□□ 2.67
CDH17Q12864 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDH17Q12864 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
CDH17Q12864 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
CDH17Q12864 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.48■■■□□ 2.63
CDH17Q12864 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDH17Q12864 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDH17Q12864 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
CDH17Q12864 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
CDH17Q12864 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.22■■■□□ 2.59
CDH17Q12864 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDH17Q12864 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
CDH17Q12864 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CDH17Q12864 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
CDH17Q12864 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDH17Q12864 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDH17Q12864 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDH17Q12864 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.98■■■□□ 2.55
CDH17Q12864 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
CDH17Q12864 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.91■■■□□ 2.54
CDH17Q12864 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.87■■■□□ 2.53
CDH17Q12864 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDH17Q12864 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CDH17Q12864 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDH17Q12864 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.57■■■□□ 2.48
CDH17Q12864 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
CDH17Q12864 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.46■■■□□ 2.47
CDH17Q12864 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
CDH17Q12864 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDH17Q12864 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.34■■■□□ 2.45
CDH17Q12864 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDH17Q12864 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.25■■■□□ 2.43
CDH17Q12864 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.25■■■□□ 2.43
CDH17Q12864 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDH17Q12864 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDH17Q12864 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDH17Q12864 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CDH17Q12864 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDH17Q12864 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDH17Q12864 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CDH17Q12864 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CDH17Q12864 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CDH17Q12864 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.01■■■□□ 2.39
CDH17Q12864 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.01■■■□□ 2.39
CDH17Q12864 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CDH17Q12864 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.95■■■□□ 2.39
CDH17Q12864 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CDH17Q12864 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CDH17Q12864 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDH17Q12864 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDH17Q12864 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
CDH17Q12864 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDH17Q12864 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDH17Q12864 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
CDH17Q12864 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
CDH17Q12864 AC015813.7-201ENST00000623294 581 ntBASIC29.7■■■□□ 2.35
CDH17Q12864 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
CDH17Q12864 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CDH17Q12864 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CDH17Q12864 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CDH17Q12864 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.57■■■□□ 2.32
CDH17Q12864 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
CDH17Q12864 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CDH17Q12864 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDH17Q12864 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.49■■■□□ 2.31
CDH17Q12864 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDH17Q12864 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CDH17Q12864 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CDH17Q12864 AC145285.7-201ENST00000614819 1539 ntBASIC29.44■■■□□ 2.3
CDH17Q12864 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.34■■■□□ 2.29
CDH17Q12864 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDH17Q12864 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CDH17Q12864 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CDH17Q12864 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDH17Q12864 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.22■■■□□ 2.27
CDH17Q12864 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.21■■■□□ 2.27
CDH17Q12864 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
CDH17Q12864 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CDH17Q12864 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDH17Q12864 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDH17Q12864 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDH17Q12864 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDH17Q12864 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms