Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 AC087623.3-201ENST00000607047 1098 ntBASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH19Q8TAB3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH19Q8TAB3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH19Q8TAB3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH19Q8TAB3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH19Q8TAB3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH19Q8TAB3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH19Q8TAB3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDH19Q8TAB3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH19Q8TAB3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH19Q8TAB3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH19Q8TAB3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH19Q8TAB3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH19Q8TAB3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH19Q8TAB3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDH19Q8TAB3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDH19Q8TAB3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDH19Q8TAB3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDH19Q8TAB3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH19Q8TAB3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH19Q8TAB3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH19Q8TAB3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDH19Q8TAB3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
PCDH19Q8TAB3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH19Q8TAB3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH19Q8TAB3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDH19Q8TAB3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDH19Q8TAB3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH19Q8TAB3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 AC027612.3-201ENST00000413684 1047 ntBASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH19Q8TAB3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH19Q8TAB3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms