Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 AC009831.1-201ENST00000580420 1582 ntBASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CROCCP3Q8IVE0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CROCCP3Q8IVE0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 ABHD17AP4-201ENST00000411545 909 ntBASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CROCCP3Q8IVE0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 AP005212.1-201ENST00000581547 1997 ntBASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CROCCP3Q8IVE0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 AC144652.1-201ENST00000609974 1624 ntBASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CROCCP3Q8IVE0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CROCCP3Q8IVE0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.14■□□□□ 0.66
CROCCP3Q8IVE0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CROCCP3Q8IVE0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
CROCCP3Q8IVE0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CROCCP3Q8IVE0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.14■□□□□ 0.66
CROCCP3Q8IVE0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms