Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.36■□□□□ 0.37
SNCAP37840 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNCAP37840 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.36■□□□□ 0.37
SNCAP37840 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNCAP37840 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNCAP37840 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SNCAP37840 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 FEM1AP4-201ENST00000443167 1987 ntBASIC17.35■□□□□ 0.37
SNCAP37840 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.35■□□□□ 0.37
SNCAP37840 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.35■□□□□ 0.37
SNCAP37840 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.35■□□□□ 0.37
SNCAP37840 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.35■□□□□ 0.37
SNCAP37840 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SNCAP37840 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.35■□□□□ 0.37
SNCAP37840 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.35■□□□□ 0.37
SNCAP37840 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SNCAP37840 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SNCAP37840 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCAP37840 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SNCAP37840 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNCAP37840 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNCAP37840 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.34■□□□□ 0.37
SNCAP37840 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNCAP37840 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNCAP37840 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNCAP37840 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNCAP37840 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNCAP37840 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNCAP37840 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.34■□□□□ 0.37
SNCAP37840 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNCAP37840 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SNCAP37840 Z98882.1-201ENST00000622160 2253 ntBASIC17.34■□□□□ 0.37
SNCAP37840 C17orf82-201ENST00000623772 1530 ntBASIC17.34■□□□□ 0.37
SNCAP37840 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNCAP37840 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNCAP37840 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNCAP37840 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNCAP37840 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNCAP37840 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNCAP37840 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNCAP37840 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.33■□□□□ 0.37
SNCAP37840 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNCAP37840 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.33■□□□□ 0.37
SNCAP37840 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNCAP37840 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.33■□□□□ 0.37
SNCAP37840 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNCAP37840 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNCAP37840 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.33■□□□□ 0.36
SNCAP37840 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNCAP37840 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNCAP37840 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.33■□□□□ 0.36
SNCAP37840 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.33■□□□□ 0.36
SNCAP37840 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.33■□□□□ 0.36
SNCAP37840 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.33■□□□□ 0.36
SNCAP37840 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNCAP37840 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.33■□□□□ 0.36
SNCAP37840 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNCAP37840 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.33■□□□□ 0.36
SNCAP37840 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNCAP37840 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNCAP37840 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNCAP37840 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.33■□□□□ 0.36
SNCAP37840 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNCAP37840 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNCAP37840 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNCAP37840 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNCAP37840 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNCAP37840 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.32■□□□□ 0.36
SNCAP37840 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNCAP37840 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SNCAP37840 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SNCAP37840 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.32■□□□□ 0.36
SNCAP37840 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNCAP37840 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNCAP37840 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNCAP37840 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNCAP37840 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.32■□□□□ 0.36
SNCAP37840 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNCAP37840 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNCAP37840 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.31■□□□□ 0.36
SNCAP37840 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
SNCAP37840 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms