RNA–Protein interactions for RNA: ENST00000613880.4

MADCAM1-205, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MADCAM1, Length 1,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-205ENST00000613880 NISCHQ9Y2I1 1504 aa53.64■■■■■ 6.18
MADCAM1-205ENST00000613880 CCDC180Q9P1Z9 1646 aa47.67■■■■■ 5.22
MADCAM1-205ENST00000613880 ABCC9O60706 1549 aa46.61■■■■■ 5.05
MADCAM1-205ENST00000613880 RB1CC1Q8TDY2 1594 aa44.85■■■■■ 4.77
MADCAM1-205ENST00000613880 DCAF8L2P0C7V8 631 aa44.84■■■■■ 4.77
MADCAM1-205ENST00000613880 NACADO15069 1562 aa44.79■■■■■ 4.76
MADCAM1-205ENST00000613880 ZCCHC6Q5VYS8 1495 aaKnown RBP44.71■■■■■ 4.75
MADCAM1-205ENST00000613880 MYO15BQ96JP2 1530 aa44.51■■■■■ 4.72
MADCAM1-205ENST00000613880 DCAF1Q9Y4B6 1507 aa44.36■■■■■ 4.69
MADCAM1-205ENST00000613880 UNC13AQ9UPW8 1703 aa43.81■■■■■ 4.6
MADCAM1-205ENST00000613880 SCRIBQ14160 1630 aa43.55■■■■■ 4.56
MADCAM1-205ENST00000613880 PABPN1Q86U42 306 aaKnown RBP eCLIP43.55■■■■■ 4.56
MADCAM1-205ENST00000613880 BICRAQ9NZM4 1560 aa43.46■■■■■ 4.55
MADCAM1-205ENST00000613880 SHROOM4Q9ULL8 1493 aa43.02■■■■■ 4.48
MADCAM1-205ENST00000613880 DNAJC5BQ9UF47 199 aa42.64■■■■■ 4.42
MADCAM1-205ENST00000613880 EIF4G1Q04637 1599 aaKnown RBP42.33■■■■■ 4.37
MADCAM1-205ENST00000613880 CC2D2AQ9P2K1 1620 aa42.14■■■■■ 4.34
MADCAM1-205ENST00000613880 CECR2Q9BXF3 1484 aa41.86■■■■■ 4.29
MADCAM1-205ENST00000613880 SMARCA4P51532 1647 aa41.63■■■■■ 4.25
MADCAM1-205ENST00000613880 BAZ1AQ9NRL2 1556 aaPredicted RBP41.59■■■■■ 4.25
MADCAM1-205ENST00000613880 ATAD2BQ9ULI0 1458 aa41.36■■■■■ 4.21
MADCAM1-205ENST00000613880 MROH2BQ7Z745 1585 aa41.35■■■■■ 4.21
MADCAM1-205ENST00000613880 SMARCA2P51531 1590 aa41.34■■■■■ 4.21
MADCAM1-205ENST00000613880 NCAPD3P42695 1498 aa41.31■■■■■ 4.2
MADCAM1-205ENST00000613880 PEG3Q9GZU2 1588 aa41.18■■■■■ 4.18
MADCAM1-205ENST00000613880 HMGXB3Q12766 1538 aa41.14■■■■■ 4.18
MADCAM1-205ENST00000613880 BAZ1BQ9UIG0 1483 aaKnown RBP41.06■■■■■ 4.16
MADCAM1-205ENST00000613880 WIZO95785 1651 aa40.91■■■■■ 4.14
MADCAM1-205ENST00000613880 RSF1Q96T23 1441 aaPredicted RBP40.89■■■■■ 4.14
MADCAM1-205ENST00000613880 TOP2AP11388 1531 aaKnown RBP40.49■■■■■ 4.07
MADCAM1-205ENST00000613880 NESP48681 1621 aa40.34■■■■■ 4.05
MADCAM1-205ENST00000613880 LAMC3Q9Y6N6 1575 aa40.24■■■■■ 4.03
MADCAM1-205ENST00000613880 SUPT5HO00267 1087 aaKnown RBP40.21■■■■■ 4.03
MADCAM1-205ENST00000613880 ERCC6Q03468 1493 aa40.2■■■■■ 4.03
MADCAM1-205ENST00000613880 CADPSQ9ULU8 1353 aa40.13■■■■■ 4.01
MADCAM1-205ENST00000613880 CCDC88BA6NC98 1476 aa39.99■■■■□ 3.99
MADCAM1-205ENST00000613880 PDS5BQ9NTI5 1447 aa39.97■■■■□ 3.99
MADCAM1-205ENST00000613880 CFTRP13569 1480 aa39.91■■■■□ 3.98
MADCAM1-205ENST00000613880 KIF21AQ7Z4S6 1674 aa39.87■■■■□ 3.97
MADCAM1-205ENST00000613880 THOC2Q8NI27 1593 aaKnown RBP39.71■■■■□ 3.95
MADCAM1-205ENST00000613880 CUX2O14529 1486 aa39.69■■■■□ 3.94
MADCAM1-205ENST00000613880 FANCD2Q9BXW9 1451 aa39.69■■■■□ 3.94
MADCAM1-205ENST00000613880 CEP164Q9UPV0 1460 aa39.65■■■■□ 3.94
MADCAM1-205ENST00000613880 PRDM2Q13029 1718 aa39.62■■■■□ 3.93
MADCAM1-205ENST00000613880 MRC2Q9UBG0 1479 aa39.57■■■■□ 3.92
MADCAM1-205ENST00000613880 WDR62O43379 1518 aa39.43■■■■□ 3.9
MADCAM1-205ENST00000613880 URB2Q14146 1524 aaKnown RBP39.28■■■■□ 3.88
MADCAM1-205ENST00000613880 TOPBP1Q92547 1522 aa39.06■■■■□ 3.84
MADCAM1-205ENST00000613880 ABCC8Q09428 1581 aa39.05■■■■□ 3.84
MADCAM1-205ENST00000613880 DNMBPQ6XZF7 1577 aa39.03■■■■□ 3.84
MADCAM1-205ENST00000613880 IFT140Q96RY7 1462 aa38.8■■■■□ 3.8
MADCAM1-205ENST00000613880 CUX1P39880 1505 aa38.79■■■■□ 3.8
MADCAM1-205ENST00000613880 POLA1P09884 1462 aaPredicted RBP38.74■■■■□ 3.79
MADCAM1-205ENST00000613880 FGD5Q6ZNL6 1462 aa38.66■■■■□ 3.78
MADCAM1-205ENST00000613880 ZNF608Q9ULD9 1512 aaPredicted RBP38.63■■■■□ 3.77
MADCAM1-205ENST00000613880 TARBP1Q13395 1621 aaKnown RBP38.62■■■■□ 3.77
MADCAM1-205ENST00000613880 WRNQ14191 1432 aaPredicted RBP eCLIP38.58■■■■□ 3.77
MADCAM1-205ENST00000613880 RAD54L2Q9Y4B4 1467 aa38.57■■■■□ 3.77
MADCAM1-205ENST00000613880 SOGA1O94964 1423 aa38.57■■■■□ 3.76
MADCAM1-205ENST00000613880 EIF4G3O43432 1585 aaKnown RBP38.5■■■■□ 3.75
MADCAM1-205ENST00000613880 SYNJ1O43426 1573 aa38.49■■■■□ 3.75
MADCAM1-205ENST00000613880 TOP2BQ02880 1626 aa38.48■■■■□ 3.75
MADCAM1-205ENST00000613880 BIVM-ERCC5R4GMW8 1640 aa38.47■■■■□ 3.75
MADCAM1-205ENST00000613880 AQRO60306 1485 aaKnown RBP eCLIP38.41■■■■□ 3.74
MADCAM1-205ENST00000613880 TDRD9Q8NDG6 1382 aaKnown RBP38.35■■■■□ 3.73
MADCAM1-205ENST00000613880 DNAJC5Q9H3Z4 198 aa38.35■■■■□ 3.73
MADCAM1-205ENST00000613880 WDR97A6NE52 1622 aa38.33■■■■□ 3.73
MADCAM1-205ENST00000613880 ABCA10Q8WWZ4 1543 aa38.27■■■■□ 3.72
MADCAM1-205ENST00000613880 GAPVD1Q14C86 1478 aa38.14■■■■□ 3.7
MADCAM1-205ENST00000613880 ABCA5Q8WWZ7 1642 aa38.13■■■■□ 3.69
MADCAM1-205ENST00000613880 GRIN2BQ13224 1484 aa38.13■■■■□ 3.69
MADCAM1-205ENST00000613880 SNAPC4Q5SXM2 1469 aa38.09■■■■□ 3.69
MADCAM1-205ENST00000613880 PBRM1Q86U86 1689 aa38.07■■■■□ 3.68
MADCAM1-205ENST00000613880 OSCARQ8IYS5 282 aa38.05■■■■□ 3.68
MADCAM1-205ENST00000613880 MAGI1Q96QZ7 1491 aaPredicted RBP38.01■■■■□ 3.68
MADCAM1-205ENST00000613880 CHD1O14646 1710 aa37.99■■■■□ 3.67
MADCAM1-205ENST00000613880 FBLN2P98095 1184 aa37.97■■■■□ 3.67
MADCAM1-205ENST00000613880 TRIM41Q8WV44 630 aa37.96■■■■□ 3.67
MADCAM1-205ENST00000613880 SYNJ2O15056 1496 aa37.87■■■■□ 3.65
MADCAM1-205ENST00000613880 CHMP7Q8WUX9 453 aaPredicted RBP37.86■■■■□ 3.65
MADCAM1-205ENST00000613880 ERICH3Q5RHP9 1530 aa37.82■■■■□ 3.64
MADCAM1-205ENST00000613880 KIF27Q86VH2 1401 aa37.78■■■■□ 3.64
MADCAM1-205ENST00000613880 ADAMTS12P58397 1594 aa37.77■■■■□ 3.64
MADCAM1-205ENST00000613880 CHIC1Q5VXU3 224 aa37.73■■■■□ 3.63
MADCAM1-205ENST00000613880 FHAD1B1AJZ9 1412 aa37.69■■■■□ 3.62
MADCAM1-205ENST00000613880 GRIN2AQ12879 1464 aa37.64■■■■□ 3.62
MADCAM1-205ENST00000613880 IGF1RP08069 1367 aa37.56■■■■□ 3.6
MADCAM1-205ENST00000613880 CLASP1Q7Z460 1538 aa37.56■■■■□ 3.6
MADCAM1-205ENST00000613880 CUL7Q14999 1698 aa37.51■■■■□ 3.6
MADCAM1-205ENST00000613880 ARHGEF11O15085 1522 aa37.47■■■■□ 3.59
MADCAM1-205ENST00000613880 RUSC2Q8N2Y8 1516 aa37.46■■■■□ 3.59
MADCAM1-205ENST00000613880 RIMBP3CA6NJZ7 1639 aa37.46■■■■□ 3.59
MADCAM1-205ENST00000613880 RIMBP3BA6NNM3 1639 aa37.46■■■■□ 3.59
MADCAM1-205ENST00000613880 RIMBP3Q9UFD9 1639 aa37.46■■■■□ 3.59
MADCAM1-205ENST00000613880 CEP170Q5SW79 1584 aa37.45■■■■□ 3.59
MADCAM1-205ENST00000613880 NUP160Q12769 1436 aa37.45■■■■□ 3.59
MADCAM1-205ENST00000613880 CARMIL1Q5VZK9 1371 aa37.37■■■■□ 3.57
MADCAM1-205ENST00000613880 EEA1Q15075 1411 aa37.32■■■■□ 3.56
MADCAM1-205ENST00000613880 ARAP1Q96P48 1450 aa37.16■■■■□ 3.54
MADCAM1-205ENST00000613880 RAPGEF2Q9Y4G8 1499 aa37.16■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms