RNA–Protein interactions for RNA: ENST00000360564.5

MMP17-201, Transcript of matrix metallopeptidase 17, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MMP17, Length 2,411 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-201ENST00000360564 NISCHQ9Y2I1 1504 aa46.34■■■■■ 5.01
MMP17-201ENST00000360564 CCDC180Q9P1Z9 1646 aa40.23■■■■■ 4.03
MMP17-201ENST00000360564 ZCCHC6Q5VYS8 1495 aaKnown RBP38.94■■■■□ 3.82
MMP17-201ENST00000360564 DCAF8L2P0C7V8 631 aa38.48■■■■□ 3.75
MMP17-201ENST00000360564 DCAF1Q9Y4B6 1507 aa38.19■■■■□ 3.7
MMP17-201ENST00000360564 SHROOM4Q9ULL8 1493 aa38.18■■■■□ 3.7
MMP17-201ENST00000360564 ABCC9O60706 1549 aa38.11■■■■□ 3.69
MMP17-201ENST00000360564 MYO15BQ96JP2 1530 aa37.64■■■■□ 3.62
MMP17-201ENST00000360564 NACADO15069 1562 aa37.45■■■■□ 3.59
MMP17-201ENST00000360564 SCRIBQ14160 1630 aa37.21■■■■□ 3.55
MMP17-201ENST00000360564 RB1CC1Q8TDY2 1594 aa37.12■■■■□ 3.53
MMP17-201ENST00000360564 SUPT5HO00267 1087 aaKnown RBP36.81■■■■□ 3.48
MMP17-201ENST00000360564 UNC13AQ9UPW8 1703 aa36.48■■■■□ 3.43
MMP17-201ENST00000360564 CECR2Q9BXF3 1484 aa36.1■■■■□ 3.37
MMP17-201ENST00000360564 RSF1Q96T23 1441 aaPredicted RBP36.06■■■■□ 3.36
MMP17-201ENST00000360564 BICRAQ9NZM4 1560 aa36.05■■■■□ 3.36
MMP17-201ENST00000360564 PABPN1Q86U42 306 aaKnown RBP eCLIP36.04■■■■□ 3.36
MMP17-201ENST00000360564 MROH2BQ7Z745 1585 aa35.87■■■■□ 3.33
MMP17-201ENST00000360564 BAZ1AQ9NRL2 1556 aaPredicted RBP35.75■■■■□ 3.31
MMP17-201ENST00000360564 WIZO95785 1651 aa35.62■■■■□ 3.29
MMP17-201ENST00000360564 SMARCA4P51532 1647 aa35.6■■■■□ 3.29
MMP17-201ENST00000360564 CHIC1Q5VXU3 224 aa35.22■■■■□ 3.23
MMP17-201ENST00000360564 TOP2AP11388 1531 aaKnown RBP35.14■■■■□ 3.22
MMP17-201ENST00000360564 PEG3Q9GZU2 1588 aa35.08■■■■□ 3.21
MMP17-201ENST00000360564 ATAD2BQ9ULI0 1458 aa34.97■■■■□ 3.19
MMP17-201ENST00000360564 EIF4G1Q04637 1599 aaKnown RBP34.96■■■■□ 3.19
MMP17-201ENST00000360564 SMARCA2P51531 1590 aa34.91■■■■□ 3.18
MMP17-201ENST00000360564 CCDC88BA6NC98 1476 aa34.86■■■■□ 3.17
MMP17-201ENST00000360564 BAZ1BQ9UIG0 1483 aaKnown RBP34.8■■■■□ 3.16
MMP17-201ENST00000360564 NCAPD3P42695 1498 aa34.59■■■■□ 3.13
MMP17-201ENST00000360564 HMGXB3Q12766 1538 aa34.53■■■■□ 3.12
MMP17-201ENST00000360564 TRIM41Q8WV44 630 aa34.51■■■■□ 3.12
MMP17-201ENST00000360564 CC2D2AQ9P2K1 1620 aa34.43■■■■□ 3.1
MMP17-201ENST00000360564 ABCC8Q09428 1581 aa34.27■■■■□ 3.08
MMP17-201ENST00000360564 FAM9AQ8IZU1 332 aaPredicted RBP34.01■■■■□ 3.03
MMP17-201ENST00000360564 LOC105371045A0A1W2PR82 267 aa34■■■■□ 3.03
MMP17-201ENST00000360564 WRNQ14191 1432 aaPredicted RBP eCLIP33.94■■■■□ 3.029e-6■■■■■ 50.1
MMP17-201ENST00000360564 CFTRP13569 1480 aa33.9■■■■□ 3.02
MMP17-201ENST00000360564 SYNJ1O43426 1573 aa33.82■■■■□ 3
MMP17-201ENST00000360564 CADPSQ9ULU8 1353 aa33.76■■■■□ 3
MMP17-201ENST00000360564 PRDM2Q13029 1718 aa33.71■■■□□ 2.99
MMP17-201ENST00000360564 DNAJC5BQ9UF47 199 aa33.67■■■□□ 2.98
MMP17-201ENST00000360564 SOGA1O94964 1423 aa33.65■■■□□ 2.98
MMP17-201ENST00000360564 EHMT2Q96KQ7 1210 aa33.63■■■□□ 2.97
MMP17-201ENST00000360564 TOP2BQ02880 1626 aa33.6■■■□□ 2.97
MMP17-201ENST00000360564 BIVM-ERCC5R4GMW8 1640 aa33.54■■■□□ 2.96
MMP17-201ENST00000360564 RUSC2Q8N2Y8 1516 aa33.53■■■□□ 2.96
MMP17-201ENST00000360564 NESP48681 1621 aa33.52■■■□□ 2.96
MMP17-201ENST00000360564 CUX1P39880 1505 aa33.51■■■□□ 2.96
MMP17-201ENST00000360564 EEA1Q15075 1411 aa33.43■■■□□ 2.94
MMP17-201ENST00000360564 FANCD2Q9BXW9 1451 aa33.42■■■□□ 2.94
MMP17-201ENST00000360564 LAMC3Q9Y6N6 1575 aa33.39■■■□□ 2.94
MMP17-201ENST00000360564 CSRNP3Q8WYN3 585 aa33.37■■■□□ 2.93
MMP17-201ENST00000360564 CEP164Q9UPV0 1460 aa33.17■■■□□ 2.9
MMP17-201ENST00000360564 PDS5BQ9NTI5 1447 aa33.15■■■□□ 2.9
MMP17-201ENST00000360564 FGD5Q6ZNL6 1462 aa33.13■■■□□ 2.89
MMP17-201ENST00000360564 DNMBPQ6XZF7 1577 aa33.1■■■□□ 2.89
MMP17-201ENST00000360564 KIF21AQ7Z4S6 1674 aa33.07■■■□□ 2.89
MMP17-201ENST00000360564 TOPBP1Q92547 1522 aa33.07■■■□□ 2.88
MMP17-201ENST00000360564 GOLGA3Q08378 1498 aa33.06■■■□□ 2.88
MMP17-201ENST00000360564 UBTFP17480 764 aaKnown RBP33.04■■■□□ 2.88
MMP17-201ENST00000360564 KIF27Q86VH2 1401 aa33.04■■■□□ 2.88
MMP17-201ENST00000360564 KIF21BO75037 1637 aa33.04■■■□□ 2.88
MMP17-201ENST00000360564 URB2Q14146 1524 aaKnown RBP32.99■■■□□ 2.87
MMP17-201ENST00000360564 TNIKQ9UKE5 1360 aa32.99■■■□□ 2.87
MMP17-201ENST00000360564 CUX2O14529 1486 aa32.96■■■□□ 2.87
MMP17-201ENST00000360564 POLA1P09884 1462 aaPredicted RBP32.94■■■□□ 2.86
MMP17-201ENST00000360564 RAPGEF2Q9Y4G8 1499 aa32.93■■■□□ 2.86
MMP17-201ENST00000360564 RAD54L2Q9Y4B4 1467 aa32.89■■■□□ 2.86
MMP17-201ENST00000360564 CEP162Q5TB80 1403 aa32.89■■■□□ 2.86
MMP17-201ENST00000360564 PRXQ9BXM0 1461 aa32.85■■■□□ 2.85
MMP17-201ENST00000360564 HRCP23327 699 aa32.83■■■□□ 2.85
MMP17-201ENST00000360564 ABCA10Q8WWZ4 1543 aa32.78■■■□□ 2.84
MMP17-201ENST00000360564 ERICH3Q5RHP9 1530 aa32.77■■■□□ 2.84
MMP17-201ENST00000360564 PCGF6Q9BYE7 350 aa32.76■■■□□ 2.84
MMP17-201ENST00000360564 IGF1RP08069 1367 aa32.76■■■□□ 2.83
MMP17-201ENST00000360564 MRC2Q9UBG0 1479 aa32.71■■■□□ 2.83
MMP17-201ENST00000360564 WDR97A6NE52 1622 aa32.66■■■□□ 2.82
MMP17-201ENST00000360564 ERCC6Q03468 1493 aa32.62■■■□□ 2.81
MMP17-201ENST00000360564 RANGAP1P46060 587 aaPredicted RBP32.6■■■□□ 2.81
MMP17-201ENST00000360564 CARMIL1Q5VZK9 1371 aa32.6■■■□□ 2.81
MMP17-201ENST00000360564 CLIP1P30622 1438 aa32.59■■■□□ 2.81
MMP17-201ENST00000360564 TDRD9Q8NDG6 1382 aaKnown RBP32.57■■■□□ 2.8
MMP17-201ENST00000360564 TARBP1Q13395 1621 aaKnown RBP32.55■■■□□ 2.8
MMP17-201ENST00000360564 WDR62O43379 1518 aa32.52■■■□□ 2.8
MMP17-201ENST00000360564 ABCA5Q8WWZ7 1642 aa32.51■■■□□ 2.79
MMP17-201ENST00000360564 PPARGC1BQ86YN6 1023 aaKnown RBP32.48■■■□□ 2.79
MMP17-201ENST00000360564 GAPVD1Q14C86 1478 aa32.47■■■□□ 2.79
MMP17-201ENST00000360564 TRIM26Q12899 539 aaPredicted RBP32.46■■■□□ 2.79
MMP17-201ENST00000360564 CUL7Q14999 1698 aa32.42■■■□□ 2.78
MMP17-201ENST00000360564 THOC2Q8NI27 1593 aaKnown RBP32.41■■■□□ 2.78
MMP17-201ENST00000360564 AQRO60306 1485 aaKnown RBP eCLIP32.33■■■□□ 2.771e-6■■■■□ 20
MMP17-201ENST00000360564 IFT140Q96RY7 1462 aa32.33■■■□□ 2.77
MMP17-201ENST00000360564 VPS8Q8N3P4 1428 aa32.29■■■□□ 2.76
MMP17-201ENST00000360564 PBRM1Q86U86 1689 aa32.27■■■□□ 2.76
MMP17-201ENST00000360564 ZNF608Q9ULD9 1512 aaPredicted RBP32.26■■■□□ 2.75
MMP17-201ENST00000360564 ARAP1Q96P48 1450 aa32.23■■■□□ 2.75
MMP17-201ENST00000360564 TTBK1Q5TCY1 1321 aaPredicted RBP32.21■■■□□ 2.75
MMP17-201ENST00000360564 ARHGAP35Q9NRY4 1499 aa32.2■■■□□ 2.75
MMP17-201ENST00000360564 GRIN2BQ13224 1484 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms