Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 UBE2J2-208ENST00000450390 2455 ntTSL 524.4■■□□□ 1.52e-6■■□□□ 13.2
NKRFO15226 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.43■■□□□ 1.342e-6■■□□□ 13.2
NKRFO15226 UBE2J2-220ENST00000509720 472 ntTSL 321.95■■□□□ 1.12e-6■■□□□ 13.2
NKRFO15226 UBE2J2-217ENST00000491779 611 ntTSL 221.91■■□□□ 1.12e-6■■□□□ 13.2
NKRFO15226 UBE2J2-211ENST00000466752 886 ntTSL 321.91■■□□□ 1.12e-6■■□□□ 13.2
NKRFO15226 UBE2J2-216ENST00000488418 750 ntTSL 221.78■■□□□ 1.082e-6■■□□□ 13.2
NKRFO15226 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.97■□□□□ 0.952e-6■■□□□ 13.2
NKRFO15226 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.99■□□□□ 0.792e-6■■□□□ 13.2
NKRFO15226 UBE2J2-218ENST00000502382 530 ntTSL 418.68■□□□□ 0.582e-6■■□□□ 13.2
NKRFO15226 UBE2J2-215ENST00000477894 767 ntTSL 518.34■□□□□ 0.532e-6■■□□□ 13.2
NKRFO15226 TRAF4-209ENST00000473421 585 ntTSL 314.84□□□□□ -0.032e-7■■□□□ 13.2
NKRFO15226 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.48■■□□□ 1.671e-6■■□□□ 13.2
NKRFO15226 IQSEC1-205ENST00000618604 3744 ntTSL 1 (best) BASIC12.27□□□□□ -0.452e-6■■□□□ 13.2
NKRFO15226 ZNF503-AS2-203ENST00000484411 1125 ntTSL 1 (best)26.17■■□□□ 1.782e-7■■□□□ 13.2
NKRFO15226 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.86■■□□□ 1.732e-7■■□□□ 13.2
NKRFO15226 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.7■■□□□ 1.72e-7■■□□□ 13.2
NKRFO15226 ZNF503-AS2-205ENST00000491557 1006 ntTSL 224.49■■□□□ 1.512e-7■■□□□ 13.2
NKRFO15226 ZNF503-AS2-204ENST00000486015 628 ntTSL 320.27■□□□□ 0.842e-7■■□□□ 13.2
NKRFO15226 MTA1-219ENST00000551236 461 ntTSL 313.94□□□□□ -0.185e-7■■□□□ 13.2
NKRFO15226 TEX22-202ENST00000548638 508 ntTSL 513.79□□□□□ -0.25e-7■■□□□ 13.2
NKRFO15226 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.132e-6■■□□□ 13.2
NKRFO15226 MGAT5-204ENST00000481801 651 ntTSL 328.6■■■□□ 2.178e-10■■□□□ 13.2
NKRFO15226 MGAT5-203ENST00000468758 816 ntTSL 528.6■■■□□ 2.178e-10■■□□□ 13.2
NKRFO15226 GRB7-208ENST00000485182 879 ntTSL 219.2■□□□□ 0.664e-7■■□□□ 13.1
NKRFO15226 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.624e-7■■□□□ 13.1
NKRFO15226 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.03■□□□□ 0.484e-7■■□□□ 13.1
NKRFO15226 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.374e-7■■□□□ 13.1
NKRFO15226 GRB7-209ENST00000577695 612 ntTSL 517.06■□□□□ 0.324e-7■■□□□ 13.1
NKRFO15226 GRB7-211ENST00000583813 560 ntTSL 417.04■□□□□ 0.324e-7■■□□□ 13.1
NKRFO15226 GRB7-213ENST00000584819 1146 ntTSL 216.72■□□□□ 0.274e-7■■□□□ 13.1
NKRFO15226 GRB7-210ENST00000578702 630 ntTSL 315.43■□□□□ 0.064e-7■■□□□ 13.1
NKRFO15226 MEMO1-208ENST00000437854 315 ntTSL 516.77■□□□□ 0.287e-12■■□□□ 13.1
NKRFO15226 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.261e-8■■□□□ 13.1
NKRFO15226 CASP2-202ENST00000350623 1146 ntTSL 1 (best)16.25■□□□□ 0.191e-8■■□□□ 13.1
NKRFO15226 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.22■□□□□ 0.191e-8■■□□□ 13.1
NKRFO15226 CASP2-203ENST00000392925 616 ntTSL 3 BASIC14.52□□□□□ -0.091e-8■■□□□ 13.1
NKRFO15226 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.652e-6■■□□□ 13.1
NKRFO15226 ACAP3-205ENST00000438966 265 ntTSL 38.73□□□□□ -1.019e-7■■□□□ 13.1
NKRFO15226 AKT1-212ENST00000555380 534 ntTSL 413.18□□□□□ -0.31e-6■■□□□ 13.1
NKRFO15226 C1GALT1-203ENST00000419721 591 ntTSL 323.98■■□□□ 1.431e-8■■□□□ 13.1
NKRFO15226 C1GALT1-206ENST00000467716 458 ntTSL 520.08■□□□□ 0.811e-8■■□□□ 13.1
NKRFO15226 C1GALT1-207ENST00000476068 1186 ntTSL 1 (best)15.12■□□□□ 0.011e-8■■□□□ 13.1
NKRFO15226 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.271e-8■■□□□ 13.1
NKRFO15226 C1GALT1-204ENST00000429911 802 ntTSL 512.4□□□□□ -0.421e-8■■□□□ 13.1
NKRFO15226 PHF20-207ENST00000461122 919 ntTSL 321.22■□□□□ 0.992e-8■■□□□ 13.1
NKRFO15226 PHF20-206ENST00000452270 832 ntTSL 515.82■□□□□ 0.122e-8■■□□□ 13.1
NKRFO15226 PHF20-216ENST00000617560 618 ntTSL 215.7■□□□□ 0.12e-8■■□□□ 13.1
NKRFO15226 PHF20-201ENST00000339089 1997 ntTSL 214.59□□□□□ -0.072e-8■■□□□ 13.1
NKRFO15226 PHF20-211ENST00000481202 1635 ntTSL 1 (best)14.19□□□□□ -0.142e-8■■□□□ 13.1
NKRFO15226 PHF20-208ENST00000461405 550 ntTSL 213.81□□□□□ -0.22e-8■■□□□ 13.1
NKRFO15226 PHF20-202ENST00000374000 1814 ntTSL 1 (best)13.48□□□□□ -0.252e-8■■□□□ 13.1
NKRFO15226 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.282e-8■■□□□ 13.1
NKRFO15226 DMTN-211ENST00000518816 997 ntTSL 223.51■■□□□ 1.356e-7■■□□□ 13.1
NKRFO15226 DMTN-217ENST00000520856 589 ntTSL 316.07■□□□□ 0.166e-7■■□□□ 13.1
NKRFO15226 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.425e-7■■□□□ 13.1
NKRFO15226 USP7-208ENST00000563961 4533 ntTSL 515.07■□□□□ 05e-7■■□□□ 13.1
NKRFO15226 USP7-219ENST00000569230 569 ntTSL 55.93□□□□□ -1.465e-7■■□□□ 13.1
NKRFO15226 USP3-205ENST00000557884 958 ntTSL 316.35■□□□□ 0.216e-7■■□□□ 13.1
NKRFO15226 USP3-221ENST00000561442 542 ntTSL 516.35■□□□□ 0.216e-7■■□□□ 13.1
NKRFO15226 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.92□□□□□ -0.026e-7■■□□□ 13.1
NKRFO15226 USP3-202ENST00000380324 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.276e-7■■□□□ 13.1
NKRFO15226 USP3-206ENST00000558157 2439 ntTSL 1 (best)11.62□□□□□ -0.556e-7■■□□□ 13.1
NKRFO15226 USP3-216ENST00000559873 584 ntTSL 511.48□□□□□ -0.576e-7■■□□□ 13.1
NKRFO15226 USP3-219ENST00000561326 543 ntTSL 411.45□□□□□ -0.586e-7■■□□□ 13.1
NKRFO15226 USP3-217ENST00000560070 545 ntTSL 49.78□□□□□ -0.846e-7■■□□□ 13.1
NKRFO15226 USP3-210ENST00000559192 5499 ntTSL 1 (best)7.47□□□□□ -1.216e-7■■□□□ 13.1
NKRFO15226 SLC16A3-218ENST00000583444 2882 nt21.61■■□□□ 1.052e-11■■□□□ 13.1
NKRFO15226 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.261e-6■■□□□ 13.1
NKRFO15226 SH3YL1-221ENST00000477707 581 ntTSL 424.35■■□□□ 1.492e-7■■□□□ 13.1
NKRFO15226 SH3YL1-224ENST00000488044 672 ntTSL 418.4■□□□□ 0.542e-7■■□□□ 13.1
NKRFO15226 SH3YL1-220ENST00000475027 599 ntTSL 514.35□□□□□ -0.112e-7■■□□□ 13.1
NKRFO15226 SH3YL1-210ENST00000454318 581 ntTSL 314.12□□□□□ -0.152e-7■■□□□ 13.1
NKRFO15226 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC13.44□□□□□ -0.262e-7■■□□□ 13.1
NKRFO15226 SH3YL1-225ENST00000488979 541 ntTSL 511.63□□□□□ -0.552e-7■■□□□ 13.1
NKRFO15226 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC9.77□□□□□ -0.852e-7■■□□□ 13.1
NKRFO15226 SH3YL1-214ENST00000465733 551 ntTSL 49.31□□□□□ -0.922e-7■■□□□ 13.1
NKRFO15226 SH3YL1-218ENST00000472861 441 ntTSL 39.31□□□□□ -0.922e-7■■□□□ 13.1
NKRFO15226 SH3YL1-215ENST00000468321 2739 ntTSL 1 (best)8.98□□□□□ -0.972e-7■■□□□ 13.1
NKRFO15226 SH3YL1-212ENST00000462719 569 ntTSL 46.65□□□□□ -1.342e-7■■□□□ 13.1
NKRFO15226 SH3YL1-207ENST00000415368 494 ntTSL 36.38□□□□□ -1.392e-7■■□□□ 13.1
NKRFO15226 AHDC1-203ENST00000480033 546 ntTSL 521.22■□□□□ 0.992e-6■■□□□ 13.1
NKRFO15226 AHDC1-205ENST00000490295 511 ntTSL 518.5■□□□□ 0.552e-6■■□□□ 13.1
NKRFO15226 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.292e-6■■□□□ 13.1
NKRFO15226 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.052e-6■■□□□ 13.1
NKRFO15226 PFN1-202ENST00000572383 539 ntTSL 320.68■□□□□ 0.94e-15■■□□□ 13.1
NKRFO15226 ZNF362-203ENST00000483388 712 ntTSL 226.84■■□□□ 1.892e-6■■□□□ 13.1
NKRFO15226 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.212e-6■■□□□ 13.1
NKRFO15226 ZNF362-204ENST00000490959 197 ntTSL 510.59□□□□□ -0.712e-6■■□□□ 13.1
NKRFO15226 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.755e-7■■□□□ 13.1
NKRFO15226 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.22e-6■■□□□ 13.1
NKRFO15226 MTA3-209ENST00000454356 1702 ntTSL 533.14■■■□□ 2.92e-8■■□□□ 13.1
NKRFO15226 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.52e-8■■□□□ 13.1
NKRFO15226 NELFCD-202ENST00000464363 764 ntTSL 220.49■□□□□ 0.872e-8■■□□□ 13.1
NKRFO15226 POLG-224ENST00000637711 142 ntTSL 519.79■□□□□ 0.762e-8■■□□□ 13.1
NKRFO15226 NELFCD-208ENST00000482747 1701 ntTSL 219.52■□□□□ 0.722e-8■■□□□ 13.1
NKRFO15226 NELFCD-201ENST00000460601 2137 ntTSL 1 (best)18.63■□□□□ 0.572e-8■■□□□ 13.1
NKRFO15226 NELFCD-211ENST00000492016 606 ntTSL 217.97■□□□□ 0.472e-8■■□□□ 13.1
NKRFO15226 NELFCD-203ENST00000471621 902 ntTSL 217.97■□□□□ 0.472e-8■■□□□ 13.1
NKRFO15226 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.022e-8■■□□□ 13.1
NKRFO15226 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.8□□□□□ -0.042e-8■■□□□ 13.1
Retrieved 100 of 9,198 protein–RNA pairs in 114.4 ms