RNA–Protein interactions for RNA: ENST00000374000.8

PHF20-202, Transcript of PHD finger protein 20, humanhuman

TSL 1 (best)

Gene PHF20, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-202ENST00000374000 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
PHF20-202ENST00000374000 ABCC9O60706 1549 aa26.82■■□□□ 1.88
PHF20-202ENST00000374000 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
PHF20-202ENST00000374000 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.68
PHF20-202ENST00000374000 RB1CC1Q8TDY2 1594 aa25.29■■□□□ 1.64
PHF20-202ENST00000374000 NACADO15069 1562 aa25.03■■□□□ 1.6
PHF20-202ENST00000374000 PABPN1Q86U42 306 aaKnown RBP eCLIP24.94■■□□□ 1.58
PHF20-202ENST00000374000 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
PHF20-202ENST00000374000 UNC13AQ9UPW8 1703 aa24.73■■□□□ 1.55
PHF20-202ENST00000374000 BICRAQ9NZM4 1560 aa24.64■■□□□ 1.54
PHF20-202ENST00000374000 MYO15BQ96JP2 1530 aa24.54■■□□□ 1.52
PHF20-202ENST00000374000 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
PHF20-202ENST00000374000 CECR2Q9BXF3 1484 aa24.18■■□□□ 1.46
PHF20-202ENST00000374000 SHROOM4Q9ULL8 1493 aa24.17■■□□□ 1.46
PHF20-202ENST00000374000 ZCCHC6Q5VYS8 1495 aaKnown RBP24.16■■□□□ 1.46
PHF20-202ENST00000374000 DCAF1Q9Y4B6 1507 aa24.09■■□□□ 1.45
PHF20-202ENST00000374000 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
PHF20-202ENST00000374000 EIF4G1Q04637 1599 aaKnown RBP24.04■■□□□ 1.44
PHF20-202ENST00000374000 DNAJC5Q9H3Z4 198 aa23.7■■□□□ 1.38
PHF20-202ENST00000374000 CUX2O14529 1486 aa23.23■■□□□ 1.31
PHF20-202ENST00000374000 NCAPD3P42695 1498 aa23.14■■□□□ 1.3
PHF20-202ENST00000374000 ERCC6Q03468 1493 aa23.14■■□□□ 1.29
PHF20-202ENST00000374000 ATAD2BQ9ULI0 1458 aa23.03■■□□□ 1.28
PHF20-202ENST00000374000 NESP48681 1621 aa22.96■■□□□ 1.27
PHF20-202ENST00000374000 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
PHF20-202ENST00000374000 SMARCA4P51532 1647 aa22.89■■□□□ 1.26
PHF20-202ENST00000374000 SMARCA2P51531 1590 aa22.89■■□□□ 1.25
PHF20-202ENST00000374000 BAZ1BQ9UIG0 1483 aaKnown RBP22.76■■□□□ 1.23
PHF20-202ENST00000374000 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
PHF20-202ENST00000374000 BAZ1AQ9NRL2 1556 aaPredicted RBP22.7■■□□□ 1.22
PHF20-202ENST00000374000 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
PHF20-202ENST00000374000 LAMC3Q9Y6N6 1575 aa22.64■■□□□ 1.22
PHF20-202ENST00000374000 KIF21AQ7Z4S6 1674 aa22.59■■□□□ 1.21
PHF20-202ENST00000374000 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
PHF20-202ENST00000374000 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
PHF20-202ENST00000374000 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
PHF20-202ENST00000374000 CADPSQ9ULU8 1353 aa22.42■■□□□ 1.18
PHF20-202ENST00000374000 MRC2Q9UBG0 1479 aa22.39■■□□□ 1.18
PHF20-202ENST00000374000 WDR62O43379 1518 aa22.35■■□□□ 1.17
PHF20-202ENST00000374000 WIZO95785 1651 aa22.26■■□□□ 1.15
PHF20-202ENST00000374000 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
PHF20-202ENST00000374000 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
PHF20-202ENST00000374000 OSCARQ8IYS5 282 aa22.11■■□□□ 1.13
PHF20-202ENST00000374000 CFTRP13569 1480 aa22.08■■□□□ 1.13
PHF20-202ENST00000374000 URB2Q14146 1524 aaKnown RBP22.04■■□□□ 1.12
PHF20-202ENST00000374000 RSF1Q96T23 1441 aaPredicted RBP21.95■■□□□ 1.1
PHF20-202ENST00000374000 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
PHF20-202ENST00000374000 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
PHF20-202ENST00000374000 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
PHF20-202ENST00000374000 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
PHF20-202ENST00000374000 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
PHF20-202ENST00000374000 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
PHF20-202ENST00000374000 ARHGEF11O15085 1522 aa21.78■■□□□ 1.08
PHF20-202ENST00000374000 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
PHF20-202ENST00000374000 TOPBP1Q92547 1522 aa21.72■■□□□ 1.07
PHF20-202ENST00000374000 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
PHF20-202ENST00000374000 EIF4G3O43432 1585 aaKnown RBP21.66■■□□□ 1.06
PHF20-202ENST00000374000 CYB5RLQ6IPT4 315 aa21.64■■□□□ 1.06
PHF20-202ENST00000374000 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.052e-7■■■□□ 16.8
PHF20-202ENST00000374000 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.04
PHF20-202ENST00000374000 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
PHF20-202ENST00000374000 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
PHF20-202ENST00000374000 CHD1O14646 1710 aa21.56■■□□□ 1.04
PHF20-202ENST00000374000 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
PHF20-202ENST00000374000 TRHP20396 242 aaPredicted RBP21.51■■□□□ 1.03
PHF20-202ENST00000374000 FBLN2P98095 1184 aa21.5■■□□□ 1.03
PHF20-202ENST00000374000 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
PHF20-202ENST00000374000 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
PHF20-202ENST00000374000 TDRD9Q8NDG6 1382 aaKnown RBP21.4■■□□□ 1.02
PHF20-202ENST00000374000 SOGA1O94964 1423 aa21.36■■□□□ 1.01
PHF20-202ENST00000374000 SNAPC4Q5SXM2 1469 aa21.34■■□□□ 1.01
PHF20-202ENST00000374000 CLASP1Q7Z460 1538 aa21.33■■□□□ 1.01
PHF20-202ENST00000374000 FGD5Q6ZNL6 1462 aa21.29■■□□□ 1
PHF20-202ENST00000374000 CHMP7Q8WUX9 453 aaPredicted RBP21.26■□□□□ 0.99
PHF20-202ENST00000374000 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
PHF20-202ENST00000374000 WDR97A6NE52 1622 aa21.23■□□□□ 0.99
PHF20-202ENST00000374000 MAGI1Q96QZ7 1491 aaPredicted RBP21.23■□□□□ 0.99
PHF20-202ENST00000374000 CUX1P39880 1505 aa21.22■□□□□ 0.99
PHF20-202ENST00000374000 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
PHF20-202ENST00000374000 SYNJ2O15056 1496 aa21.18■□□□□ 0.98
PHF20-202ENST00000374000 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
PHF20-202ENST00000374000 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
PHF20-202ENST00000374000 PBRM1Q86U86 1689 aa21.08■□□□□ 0.96
PHF20-202ENST00000374000 ERCC6L2Q5T890 1561 aa21.02■□□□□ 0.96
PHF20-202ENST00000374000 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
PHF20-202ENST00000374000 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
PHF20-202ENST00000374000 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
PHF20-202ENST00000374000 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
PHF20-202ENST00000374000 NUP160Q12769 1436 aa20.9■□□□□ 0.94
PHF20-202ENST00000374000 ADAMTS12P58397 1594 aa20.89■□□□□ 0.93
PHF20-202ENST00000374000 SHROOM2Q13796 1616 aa20.83■□□□□ 0.93
PHF20-202ENST00000374000 WRNQ14191 1432 aaPredicted RBP eCLIP20.83■□□□□ 0.92
PHF20-202ENST00000374000 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
PHF20-202ENST00000374000 KIF13AQ9H1H9 1805 aa20.75■□□□□ 0.91
PHF20-202ENST00000374000 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
PHF20-202ENST00000374000 BIVM-ERCC5R4GMW8 1640 aa20.73■□□□□ 0.91
PHF20-202ENST00000374000 PRG4Q92954 1404 aaPredicted RBP20.73■□□□□ 0.91
PHF20-202ENST00000374000 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
PHF20-202ENST00000374000 SUPT5HO00267 1087 aaKnown RBP20.69■□□□□ 0.9
PHF20-202ENST00000374000 JPH4Q96JJ6 628 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms