RNA–Protein interactions for RNA: ENST00000471621.5

NELFCD-203, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-203ENST00000471621 NISCHQ9Y2I1 1504 aa37.57■■■■□ 3.61
NELFCD-203ENST00000471621 CCDC180Q9P1Z9 1646 aa33.2■■■□□ 2.9
NELFCD-203ENST00000471621 ABCC9O60706 1549 aa31.95■■■□□ 2.7
NELFCD-203ENST00000471621 ZCCHC6Q5VYS8 1495 aaKnown RBP31.4■■■□□ 2.62
NELFCD-203ENST00000471621 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
NELFCD-203ENST00000471621 MYO15BQ96JP2 1530 aa31.19■■■□□ 2.58
NELFCD-203ENST00000471621 NACADO15069 1562 aa31.13■■■□□ 2.57
NELFCD-203ENST00000471621 DCAF8L2P0C7V8 631 aa31.1■■■□□ 2.57
NELFCD-203ENST00000471621 RB1CC1Q8TDY2 1594 aa31.02■■■□□ 2.56
NELFCD-203ENST00000471621 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
NELFCD-203ENST00000471621 UNC13AQ9UPW8 1703 aa30.17■■■□□ 2.42
NELFCD-203ENST00000471621 BICRAQ9NZM4 1560 aa30.02■■■□□ 2.4
NELFCD-203ENST00000471621 PABPN1Q86U42 306 aaKnown RBP eCLIP29.92■■■□□ 2.38
NELFCD-203ENST00000471621 SHROOM4Q9ULL8 1493 aa29.92■■■□□ 2.38
NELFCD-203ENST00000471621 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
NELFCD-203ENST00000471621 CECR2Q9BXF3 1484 aa29.16■■■□□ 2.26
NELFCD-203ENST00000471621 BAZ1AQ9NRL2 1556 aaPredicted RBP29.11■■■□□ 2.25
NELFCD-203ENST00000471621 SMARCA4P51532 1647 aa29.02■■■□□ 2.24
NELFCD-203ENST00000471621 CC2D2AQ9P2K1 1620 aa28.94■■■□□ 2.22
NELFCD-203ENST00000471621 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
NELFCD-203ENST00000471621 DNAJC5BQ9UF47 199 aa28.88■■■□□ 2.21
NELFCD-203ENST00000471621 PEG3Q9GZU2 1588 aa28.8■■■□□ 2.2
NELFCD-203ENST00000471621 RSF1Q96T23 1441 aaPredicted RBP28.8■■■□□ 2.2
NELFCD-203ENST00000471621 SMARCA2P51531 1590 aa28.79■■■□□ 2.2
NELFCD-203ENST00000471621 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
NELFCD-203ENST00000471621 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
NELFCD-203ENST00000471621 HMGXB3Q12766 1538 aa28.63■■■□□ 2.17
NELFCD-203ENST00000471621 WIZO95785 1651 aa28.58■■■□□ 2.16
NELFCD-203ENST00000471621 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
NELFCD-203ENST00000471621 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.14
NELFCD-203ENST00000471621 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
NELFCD-203ENST00000471621 CCDC88BA6NC98 1476 aa28.04■■■□□ 2.08
NELFCD-203ENST00000471621 CADPSQ9ULU8 1353 aa27.91■■■□□ 2.06
NELFCD-203ENST00000471621 LAMC3Q9Y6N6 1575 aa27.87■■■□□ 2.05
NELFCD-203ENST00000471621 CFTRP13569 1480 aa27.84■■■□□ 2.05
NELFCD-203ENST00000471621 NESP48681 1621 aa27.77■■■□□ 2.04
NELFCD-203ENST00000471621 PDS5BQ9NTI5 1447 aa27.69■■■□□ 2.02
NELFCD-203ENST00000471621 PRDM2Q13029 1718 aa27.56■■■□□ 2
NELFCD-203ENST00000471621 FANCD2Q9BXW9 1451 aa27.55■■■□□ 2
NELFCD-203ENST00000471621 ERCC6Q03468 1493 aa27.54■■■□□ 2
NELFCD-203ENST00000471621 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
NELFCD-203ENST00000471621 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
NELFCD-203ENST00000471621 MRC2Q9UBG0 1479 aa27.35■■□□□ 1.97
NELFCD-203ENST00000471621 THOC2Q8NI27 1593 aaKnown RBP27.29■■□□□ 1.96
NELFCD-203ENST00000471621 ABCC8Q09428 1581 aa27.27■■□□□ 1.96
NELFCD-203ENST00000471621 WDR62O43379 1518 aa27.24■■□□□ 1.95
NELFCD-203ENST00000471621 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
NELFCD-203ENST00000471621 DNMBPQ6XZF7 1577 aa27.18■■□□□ 1.94
NELFCD-203ENST00000471621 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
NELFCD-203ENST00000471621 WRNQ14191 1432 aaPredicted RBP eCLIP27.16■■□□□ 1.94
NELFCD-203ENST00000471621 CUX2O14529 1486 aa27.15■■□□□ 1.94
NELFCD-203ENST00000471621 CUX1P39880 1505 aa27.11■■□□□ 1.93
NELFCD-203ENST00000471621 TOP2BQ02880 1626 aa27.02■■□□□ 1.92
NELFCD-203ENST00000471621 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
NELFCD-203ENST00000471621 SYNJ1O43426 1573 aa26.98■■□□□ 1.91
NELFCD-203ENST00000471621 POLA1P09884 1462 aaPredicted RBP26.96■■□□□ 1.91
NELFCD-203ENST00000471621 FGD5Q6ZNL6 1462 aa26.95■■□□□ 1.91
NELFCD-203ENST00000471621 IFT140Q96RY7 1462 aa26.92■■□□□ 1.9
NELFCD-203ENST00000471621 SOGA1O94964 1423 aa26.88■■□□□ 1.89
NELFCD-203ENST00000471621 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
NELFCD-203ENST00000471621 TARBP1Q13395 1621 aaKnown RBP26.81■■□□□ 1.88
NELFCD-203ENST00000471621 CHIC1Q5VXU3 224 aa26.79■■□□□ 1.88
NELFCD-203ENST00000471621 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
NELFCD-203ENST00000471621 ABCA10Q8WWZ4 1543 aa26.76■■□□□ 1.87
NELFCD-203ENST00000471621 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
NELFCD-203ENST00000471621 ZNF608Q9ULD9 1512 aaPredicted RBP26.66■■□□□ 1.86
NELFCD-203ENST00000471621 TDRD9Q8NDG6 1382 aaKnown RBP26.62■■□□□ 1.85
NELFCD-203ENST00000471621 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.855e-7■■■■□ 20.7
NELFCD-203ENST00000471621 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
NELFCD-203ENST00000471621 KIF27Q86VH2 1401 aa26.57■■□□□ 1.84
NELFCD-203ENST00000471621 GAPVD1Q14C86 1478 aa26.57■■□□□ 1.84
NELFCD-203ENST00000471621 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
NELFCD-203ENST00000471621 GRIN2BQ13224 1484 aa26.52■■□□□ 1.84
NELFCD-203ENST00000471621 ERICH3Q5RHP9 1530 aa26.46■■□□□ 1.83
NELFCD-203ENST00000471621 EEA1Q15075 1411 aa26.43■■□□□ 1.82
NELFCD-203ENST00000471621 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
NELFCD-203ENST00000471621 PBRM1Q86U86 1689 aa26.39■■□□□ 1.82
NELFCD-203ENST00000471621 IGF1RP08069 1367 aa26.39■■□□□ 1.82
NELFCD-203ENST00000471621 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
NELFCD-203ENST00000471621 RUSC2Q8N2Y8 1516 aa26.36■■□□□ 1.81
NELFCD-203ENST00000471621 FHAD1B1AJZ9 1412 aa26.31■■□□□ 1.8
NELFCD-203ENST00000471621 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
NELFCD-203ENST00000471621 ADAMTS12P58397 1594 aa26.28■■□□□ 1.8
NELFCD-203ENST00000471621 CUL7Q14999 1698 aa26.28■■□□□ 1.8
NELFCD-203ENST00000471621 CSRNP3Q8WYN3 585 aa26.26■■□□□ 1.79
NELFCD-203ENST00000471621 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
NELFCD-203ENST00000471621 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
NELFCD-203ENST00000471621 PRXQ9BXM0 1461 aa26.18■■□□□ 1.78
NELFCD-203ENST00000471621 FBLN2P98095 1184 aa26.16■■□□□ 1.78
NELFCD-203ENST00000471621 GRIN2AQ12879 1464 aa26.16■■□□□ 1.78
NELFCD-203ENST00000471621 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.78
NELFCD-203ENST00000471621 RAPGEF2Q9Y4G8 1499 aa26.14■■□□□ 1.78
NELFCD-203ENST00000471621 OSCARQ8IYS5 282 aa26.1■■□□□ 1.77
NELFCD-203ENST00000471621 CHD1O14646 1710 aa26.1■■□□□ 1.77
NELFCD-203ENST00000471621 NUP160Q12769 1436 aa26.05■■□□□ 1.76
NELFCD-203ENST00000471621 KIF21BO75037 1637 aa26.03■■□□□ 1.76
NELFCD-203ENST00000471621 CEP170Q5SW79 1584 aa25.96■■□□□ 1.75
NELFCD-203ENST00000471621 KIAA0586Q9BVV6 1533 aa25.93■■□□□ 1.74
NELFCD-203ENST00000471621 GOLGA3Q08378 1498 aa25.93■■□□□ 1.74
NELFCD-203ENST00000471621 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms