RNA–Protein interactions for RNA: ENST00000464363.5

NELFCD-202, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-202ENST00000464363 NISCHQ9Y2I1 1504 aa43.38■■■■■ 4.54
NELFCD-202ENST00000464363 CCDC180Q9P1Z9 1646 aa38.78■■■■□ 3.8
NELFCD-202ENST00000464363 ABCC9O60706 1549 aa38.54■■■■□ 3.76
NELFCD-202ENST00000464363 RB1CC1Q8TDY2 1594 aa36.83■■■■□ 3.49
NELFCD-202ENST00000464363 NACADO15069 1562 aa36.65■■■■□ 3.46
NELFCD-202ENST00000464363 DCAF8L2P0C7V8 631 aa36.64■■■■□ 3.46
NELFCD-202ENST00000464363 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
NELFCD-202ENST00000464363 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
NELFCD-202ENST00000464363 PABPN1Q86U42 306 aaKnown RBP eCLIP35.97■■■■□ 3.35
NELFCD-202ENST00000464363 DNAJC5BQ9UF47 199 aa35.89■■■■□ 3.34
NELFCD-202ENST00000464363 UNC13AQ9UPW8 1703 aa35.86■■■■□ 3.33
NELFCD-202ENST00000464363 DCAF1Q9Y4B6 1507 aa35.86■■■■□ 3.33
NELFCD-202ENST00000464363 BICRAQ9NZM4 1560 aa35.66■■■■□ 3.3
NELFCD-202ENST00000464363 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
NELFCD-202ENST00000464363 SHROOM4Q9ULL8 1493 aa35.3■■■■□ 3.24
NELFCD-202ENST00000464363 EIF4G1Q04637 1599 aaKnown RBP34.81■■■■□ 3.16
NELFCD-202ENST00000464363 CC2D2AQ9P2K1 1620 aa34.81■■■■□ 3.16
NELFCD-202ENST00000464363 CECR2Q9BXF3 1484 aa34.71■■■■□ 3.15
NELFCD-202ENST00000464363 NCAPD3P42695 1498 aa33.83■■■■□ 3.01
NELFCD-202ENST00000464363 SMARCA4P51532 1647 aa33.75■■■□□ 2.99
NELFCD-202ENST00000464363 ATAD2BQ9ULI0 1458 aa33.75■■■□□ 2.99
NELFCD-202ENST00000464363 SMARCA2P51531 1590 aa33.7■■■□□ 2.99
NELFCD-202ENST00000464363 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
NELFCD-202ENST00000464363 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
NELFCD-202ENST00000464363 BAZ1BQ9UIG0 1483 aaKnown RBP33.47■■■□□ 2.95
NELFCD-202ENST00000464363 PEG3Q9GZU2 1588 aa33.43■■■□□ 2.94
NELFCD-202ENST00000464363 MROH2BQ7Z745 1585 aa33.4■■■□□ 2.94
NELFCD-202ENST00000464363 ERCC6Q03468 1493 aa33.32■■■□□ 2.92
NELFCD-202ENST00000464363 NESP48681 1621 aa33.16■■■□□ 2.9
NELFCD-202ENST00000464363 CUX2O14529 1486 aa33.13■■■□□ 2.89
NELFCD-202ENST00000464363 LAMC3Q9Y6N6 1575 aa33.01■■■□□ 2.88
NELFCD-202ENST00000464363 WIZO95785 1651 aa33■■■□□ 2.87
NELFCD-202ENST00000464363 PDS5BQ9NTI5 1447 aa32.88■■■□□ 2.85
NELFCD-202ENST00000464363 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
NELFCD-202ENST00000464363 CADPSQ9ULU8 1353 aa32.84■■■□□ 2.85
NELFCD-202ENST00000464363 DNAJC5Q9H3Z4 198 aa32.84■■■□□ 2.85
NELFCD-202ENST00000464363 THOC2Q8NI27 1593 aaKnown RBP32.73■■■□□ 2.83
NELFCD-202ENST00000464363 KIF21AQ7Z4S6 1674 aa32.7■■■□□ 2.83
NELFCD-202ENST00000464363 TOP2AP11388 1531 aaKnown RBP32.63■■■□□ 2.81
NELFCD-202ENST00000464363 MRC2Q9UBG0 1479 aa32.53■■■□□ 2.8
NELFCD-202ENST00000464363 CFTRP13569 1480 aa32.5■■■□□ 2.79
NELFCD-202ENST00000464363 CEP164Q9UPV0 1460 aa32.46■■■□□ 2.79
NELFCD-202ENST00000464363 FANCD2Q9BXW9 1451 aa32.45■■■□□ 2.79
NELFCD-202ENST00000464363 WDR62O43379 1518 aa32.4■■■□□ 2.78
NELFCD-202ENST00000464363 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
NELFCD-202ENST00000464363 URB2Q14146 1524 aaKnown RBP32.11■■■□□ 2.73
NELFCD-202ENST00000464363 PRDM2Q13029 1718 aa32.11■■■□□ 2.73
NELFCD-202ENST00000464363 ABCC8Q09428 1581 aa31.87■■■□□ 2.69
NELFCD-202ENST00000464363 TOPBP1Q92547 1522 aa31.84■■■□□ 2.69
NELFCD-202ENST00000464363 IFT140Q96RY7 1462 aa31.81■■■□□ 2.68
NELFCD-202ENST00000464363 OSCARQ8IYS5 282 aa31.76■■■□□ 2.67
NELFCD-202ENST00000464363 DNMBPQ6XZF7 1577 aa31.74■■■□□ 2.67
NELFCD-202ENST00000464363 SUPT5HO00267 1087 aaKnown RBP31.69■■■□□ 2.66
NELFCD-202ENST00000464363 ZNF608Q9ULD9 1512 aaPredicted RBP31.68■■■□□ 2.66
NELFCD-202ENST00000464363 TRIM41Q8WV44 630 aa31.53■■■□□ 2.64
NELFCD-202ENST00000464363 POLA1P09884 1462 aaPredicted RBP31.52■■■□□ 2.64
NELFCD-202ENST00000464363 TARBP1Q13395 1621 aaKnown RBP31.5■■■□□ 2.63
NELFCD-202ENST00000464363 EIF4G3O43432 1585 aaKnown RBP31.5■■■□□ 2.63
NELFCD-202ENST00000464363 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.631e-7■■■■□ 21.1
NELFCD-202ENST00000464363 SOGA1O94964 1423 aa31.46■■■□□ 2.63
NELFCD-202ENST00000464363 RAD54L2Q9Y4B4 1467 aa31.4■■■□□ 2.62
NELFCD-202ENST00000464363 FGD5Q6ZNL6 1462 aa31.38■■■□□ 2.61
NELFCD-202ENST00000464363 CUX1P39880 1505 aa31.37■■■□□ 2.61
NELFCD-202ENST00000464363 TDRD9Q8NDG6 1382 aaKnown RBP31.34■■■□□ 2.61
NELFCD-202ENST00000464363 FBLN2P98095 1184 aa31.3■■■□□ 2.6
NELFCD-202ENST00000464363 WDR97A6NE52 1622 aa31.25■■■□□ 2.59
NELFCD-202ENST00000464363 CHD1O14646 1710 aa31.19■■■□□ 2.58
NELFCD-202ENST00000464363 RIMBP3CA6NJZ7 1639 aa31.16■■■□□ 2.58
NELFCD-202ENST00000464363 RIMBP3BA6NNM3 1639 aa31.16■■■□□ 2.58
NELFCD-202ENST00000464363 RIMBP3Q9UFD9 1639 aa31.16■■■□□ 2.58
NELFCD-202ENST00000464363 GRIN2BQ13224 1484 aa31.14■■■□□ 2.57
NELFCD-202ENST00000464363 SNAPC4Q5SXM2 1469 aa31.14■■■□□ 2.57
NELFCD-202ENST00000464363 ARHGEF11O15085 1522 aa31.13■■■□□ 2.57
NELFCD-202ENST00000464363 CHMP7Q8WUX9 453 aaPredicted RBP31.12■■■□□ 2.57
NELFCD-202ENST00000464363 MAGI1Q96QZ7 1491 aaPredicted RBP31.1■■■□□ 2.57
NELFCD-202ENST00000464363 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
NELFCD-202ENST00000464363 ABCA10Q8WWZ4 1543 aa31.05■■■□□ 2.56
NELFCD-202ENST00000464363 WRNQ14191 1432 aaPredicted RBP eCLIP31.05■■■□□ 2.56
NELFCD-202ENST00000464363 SYNJ2O15056 1496 aa30.99■■■□□ 2.55
NELFCD-202ENST00000464363 CYB5RLQ6IPT4 315 aa30.97■■■□□ 2.55
NELFCD-202ENST00000464363 TOP2BQ02880 1626 aa30.96■■■□□ 2.55
NELFCD-202ENST00000464363 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
NELFCD-202ENST00000464363 SYNJ1O43426 1573 aa30.93■■■□□ 2.54
NELFCD-202ENST00000464363 ABCA5Q8WWZ7 1642 aa30.92■■■□□ 2.54
NELFCD-202ENST00000464363 BIVM-ERCC5R4GMW8 1640 aa30.92■■■□□ 2.54
NELFCD-202ENST00000464363 CLASP1Q7Z460 1538 aa30.86■■■□□ 2.53
NELFCD-202ENST00000464363 ARAP1Q96P48 1450 aa30.82■■■□□ 2.52
NELFCD-202ENST00000464363 GRIN2AQ12879 1464 aa30.7■■■□□ 2.51
NELFCD-202ENST00000464363 FHAD1B1AJZ9 1412 aa30.68■■■□□ 2.5
NELFCD-202ENST00000464363 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
NELFCD-202ENST00000464363 ADAMTS12P58397 1594 aa30.67■■■□□ 2.5
NELFCD-202ENST00000464363 NUP160Q12769 1436 aa30.58■■■□□ 2.49
NELFCD-202ENST00000464363 TRHP20396 242 aaPredicted RBP30.58■■■□□ 2.49
NELFCD-202ENST00000464363 CEP170Q5SW79 1584 aa30.54■■■□□ 2.48
NELFCD-202ENST00000464363 KIF27Q86VH2 1401 aa30.44■■■□□ 2.46
NELFCD-202ENST00000464363 IGF1RP08069 1367 aa30.38■■■□□ 2.45
NELFCD-202ENST00000464363 ERCC6L2Q5T890 1561 aa30.37■■■□□ 2.45
NELFCD-202ENST00000464363 SHROOM2Q13796 1616 aa30.37■■■□□ 2.45
NELFCD-202ENST00000464363 JPH4Q96JJ6 628 aa30.36■■■□□ 2.45
NELFCD-202ENST00000464363 PRG4Q92954 1404 aaPredicted RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms