RNA–Protein interactions for RNA: ENST00000339089.10

PHF20-201, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-201ENST00000339089 NISCHQ9Y2I1 1504 aa31.01■■■□□ 2.56
PHF20-201ENST00000339089 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
PHF20-201ENST00000339089 ABCC9O60706 1549 aa26.79■■□□□ 1.88
PHF20-201ENST00000339089 ZCCHC6Q5VYS8 1495 aaKnown RBP25.86■■□□□ 1.73
PHF20-201ENST00000339089 NACADO15069 1562 aa25.8■■□□□ 1.72
PHF20-201ENST00000339089 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
PHF20-201ENST00000339089 RB1CC1Q8TDY2 1594 aa25.77■■□□□ 1.72
PHF20-201ENST00000339089 MYO15BQ96JP2 1530 aa25.71■■□□□ 1.71
PHF20-201ENST00000339089 DCAF1Q9Y4B6 1507 aa25.65■■□□□ 1.7
PHF20-201ENST00000339089 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
PHF20-201ENST00000339089 BICRAQ9NZM4 1560 aa25.11■■□□□ 1.61
PHF20-201ENST00000339089 SCRIBQ14160 1630 aa25.09■■□□□ 1.61
PHF20-201ENST00000339089 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.61
PHF20-201ENST00000339089 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
PHF20-201ENST00000339089 DNAJC5BQ9UF47 199 aa24.6■■□□□ 1.53
PHF20-201ENST00000339089 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
PHF20-201ENST00000339089 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
PHF20-201ENST00000339089 CECR2Q9BXF3 1484 aa24.2■■□□□ 1.46
PHF20-201ENST00000339089 SMARCA4P51532 1647 aa24.02■■□□□ 1.44
PHF20-201ENST00000339089 BAZ1AQ9NRL2 1556 aaPredicted RBP23.98■■□□□ 1.43
PHF20-201ENST00000339089 MROH2BQ7Z745 1585 aa23.93■■□□□ 1.42
PHF20-201ENST00000339089 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
PHF20-201ENST00000339089 NCAPD3P42695 1498 aa23.86■■□□□ 1.41
PHF20-201ENST00000339089 PEG3Q9GZU2 1588 aa23.81■■□□□ 1.4
PHF20-201ENST00000339089 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
PHF20-201ENST00000339089 HMGXB3Q12766 1538 aa23.71■■□□□ 1.39
PHF20-201ENST00000339089 RSF1Q96T23 1441 aaPredicted RBP23.7■■□□□ 1.38
PHF20-201ENST00000339089 WIZO95785 1651 aa23.66■■□□□ 1.38
PHF20-201ENST00000339089 BAZ1BQ9UIG0 1483 aaKnown RBP23.63■■□□□ 1.37
PHF20-201ENST00000339089 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
PHF20-201ENST00000339089 NESP48681 1621 aa23.26■■□□□ 1.31
PHF20-201ENST00000339089 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
PHF20-201ENST00000339089 LAMC3Q9Y6N6 1575 aa23.15■■□□□ 1.3
PHF20-201ENST00000339089 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
PHF20-201ENST00000339089 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
PHF20-201ENST00000339089 CFTRP13569 1480 aa23.05■■□□□ 1.28
PHF20-201ENST00000339089 ERCC6Q03468 1493 aa23■■□□□ 1.27
PHF20-201ENST00000339089 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
PHF20-201ENST00000339089 KIF21AQ7Z4S6 1674 aa22.94■■□□□ 1.26
PHF20-201ENST00000339089 FANCD2Q9BXW9 1451 aa22.86■■□□□ 1.25
PHF20-201ENST00000339089 THOC2Q8NI27 1593 aaKnown RBP22.86■■□□□ 1.25
PHF20-201ENST00000339089 PRDM2Q13029 1718 aa22.8■■□□□ 1.24
PHF20-201ENST00000339089 CEP164Q9UPV0 1460 aa22.79■■□□□ 1.24
PHF20-201ENST00000339089 CUX2O14529 1486 aa22.76■■□□□ 1.23
PHF20-201ENST00000339089 MRC2Q9UBG0 1479 aa22.76■■□□□ 1.23
PHF20-201ENST00000339089 WDR62O43379 1518 aa22.7■■□□□ 1.22
PHF20-201ENST00000339089 URB2Q14146 1524 aaKnown RBP22.67■■□□□ 1.22
PHF20-201ENST00000339089 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
PHF20-201ENST00000339089 DNMBPQ6XZF7 1577 aa22.49■■□□□ 1.19
PHF20-201ENST00000339089 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
PHF20-201ENST00000339089 CUX1P39880 1505 aa22.43■■□□□ 1.18
PHF20-201ENST00000339089 POLA1P09884 1462 aaPredicted RBP22.35■■□□□ 1.17
PHF20-201ENST00000339089 IFT140Q96RY7 1462 aa22.32■■□□□ 1.16
PHF20-201ENST00000339089 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
PHF20-201ENST00000339089 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
PHF20-201ENST00000339089 WRNQ14191 1432 aaPredicted RBP eCLIP22.28■■□□□ 1.16
PHF20-201ENST00000339089 ZNF608Q9ULD9 1512 aaPredicted RBP22.28■■□□□ 1.16
PHF20-201ENST00000339089 RAD54L2Q9Y4B4 1467 aa22.27■■□□□ 1.16
PHF20-201ENST00000339089 SYNJ1O43426 1573 aa22.27■■□□□ 1.16
PHF20-201ENST00000339089 SOGA1O94964 1423 aa22.24■■□□□ 1.15
PHF20-201ENST00000339089 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
PHF20-201ENST00000339089 BIVM-ERCC5R4GMW8 1640 aa22.23■■□□□ 1.15
PHF20-201ENST00000339089 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.142e-7■■■□□ 16.8
PHF20-201ENST00000339089 EIF4G3O43432 1585 aaKnown RBP22.14■■□□□ 1.14
PHF20-201ENST00000339089 TDRD9Q8NDG6 1382 aaKnown RBP22.13■■□□□ 1.13
PHF20-201ENST00000339089 WDR97A6NE52 1622 aa22.12■■□□□ 1.13
PHF20-201ENST00000339089 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
PHF20-201ENST00000339089 ABCA5Q8WWZ7 1642 aa22■■□□□ 1.11
PHF20-201ENST00000339089 GAPVD1Q14C86 1478 aa21.98■■□□□ 1.11
PHF20-201ENST00000339089 DNAJC5Q9H3Z4 198 aa21.98■■□□□ 1.11
PHF20-201ENST00000339089 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
PHF20-201ENST00000339089 SNAPC4Q5SXM2 1469 aa21.92■■□□□ 1.1
PHF20-201ENST00000339089 PBRM1Q86U86 1689 aa21.9■■□□□ 1.1
PHF20-201ENST00000339089 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
PHF20-201ENST00000339089 CHD1O14646 1710 aa21.83■■□□□ 1.09
PHF20-201ENST00000339089 OSCARQ8IYS5 282 aa21.83■■□□□ 1.09
PHF20-201ENST00000339089 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
PHF20-201ENST00000339089 TRIM41Q8WV44 630 aa21.8■■□□□ 1.08
PHF20-201ENST00000339089 SYNJ2O15056 1496 aa21.8■■□□□ 1.08
PHF20-201ENST00000339089 KIF27Q86VH2 1401 aa21.78■■□□□ 1.08
PHF20-201ENST00000339089 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
PHF20-201ENST00000339089 FBLN2P98095 1184 aa21.77■■□□□ 1.08
PHF20-201ENST00000339089 IGF1RP08069 1367 aa21.76■■□□□ 1.07
PHF20-201ENST00000339089 CHMP7Q8WUX9 453 aaPredicted RBP21.74■■□□□ 1.07
PHF20-201ENST00000339089 RUSC2Q8N2Y8 1516 aa21.74■■□□□ 1.07
PHF20-201ENST00000339089 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
PHF20-201ENST00000339089 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
PHF20-201ENST00000339089 GRIN2AQ12879 1464 aa21.69■■□□□ 1.06
PHF20-201ENST00000339089 CLASP1Q7Z460 1538 aa21.65■■□□□ 1.06
PHF20-201ENST00000339089 NUP160Q12769 1436 aa21.61■■□□□ 1.05
PHF20-201ENST00000339089 CUL7Q14999 1698 aa21.6■■□□□ 1.05
PHF20-201ENST00000339089 CEP170Q5SW79 1584 aa21.6■■□□□ 1.05
PHF20-201ENST00000339089 CARMIL1Q5VZK9 1371 aa21.59■■□□□ 1.05
PHF20-201ENST00000339089 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
PHF20-201ENST00000339089 RIMBP3CA6NJZ7 1639 aa21.5■■□□□ 1.03
PHF20-201ENST00000339089 RIMBP3BA6NNM3 1639 aa21.5■■□□□ 1.03
PHF20-201ENST00000339089 RIMBP3Q9UFD9 1639 aa21.5■■□□□ 1.03
PHF20-201ENST00000339089 PRXQ9BXM0 1461 aa21.47■■□□□ 1.03
PHF20-201ENST00000339089 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
PHF20-201ENST00000339089 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms