RNA–Protein interactions for RNA: ENST00000452270.5

PHF20-206, Transcript of PHD finger protein 20, humanhuman

TSL 5

Gene PHF20, Length 832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-206ENST00000452270 NISCHQ9Y2I1 1504 aa34.1■■■■□ 3.05
PHF20-206ENST00000452270 ABCC9O60706 1549 aa31.53■■■□□ 2.64
PHF20-206ENST00000452270 CCDC180Q9P1Z9 1646 aa30.96■■■□□ 2.55
PHF20-206ENST00000452270 DNAJC5BQ9UF47 199 aa30.12■■■□□ 2.41
PHF20-206ENST00000452270 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
PHF20-206ENST00000452270 NACADO15069 1562 aa29.44■■■□□ 2.3
PHF20-206ENST00000452270 PABPN1Q86U42 306 aaKnown RBP eCLIP29.22■■■□□ 2.27
PHF20-206ENST00000452270 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
PHF20-206ENST00000452270 UNC13AQ9UPW8 1703 aa29.03■■■□□ 2.24
PHF20-206ENST00000452270 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
PHF20-206ENST00000452270 MYO15BQ96JP2 1530 aa28.84■■■□□ 2.21
PHF20-206ENST00000452270 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
PHF20-206ENST00000452270 CECR2Q9BXF3 1484 aa28.52■■■□□ 2.16
PHF20-206ENST00000452270 CC2D2AQ9P2K1 1620 aa28.47■■■□□ 2.15
PHF20-206ENST00000452270 DNAJC5Q9H3Z4 198 aa28.29■■■□□ 2.12
PHF20-206ENST00000452270 EIF4G1Q04637 1599 aaKnown RBP28.26■■■□□ 2.11
PHF20-206ENST00000452270 DCAF1Q9Y4B6 1507 aa28.2■■■□□ 2.1
PHF20-206ENST00000452270 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
PHF20-206ENST00000452270 SCRIBQ14160 1630 aa28.07■■■□□ 2.08
PHF20-206ENST00000452270 CUX2O14529 1486 aa27.57■■■□□ 2
PHF20-206ENST00000452270 ERCC6Q03468 1493 aa27.35■■□□□ 1.97
PHF20-206ENST00000452270 NCAPD3P42695 1498 aa27.17■■□□□ 1.94
PHF20-206ENST00000452270 ATAD2BQ9ULI0 1458 aa26.95■■□□□ 1.91
PHF20-206ENST00000452270 HMGXB3Q12766 1538 aa26.91■■□□□ 1.9
PHF20-206ENST00000452270 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
PHF20-206ENST00000452270 NESP48681 1621 aa26.86■■□□□ 1.89
PHF20-206ENST00000452270 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
PHF20-206ENST00000452270 SMARCA4P51532 1647 aa26.75■■□□□ 1.87
PHF20-206ENST00000452270 TRIM41Q8WV44 630 aa26.71■■□□□ 1.87
PHF20-206ENST00000452270 LAMC3Q9Y6N6 1575 aa26.68■■□□□ 1.86
PHF20-206ENST00000452270 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
PHF20-206ENST00000452270 PDS5BQ9NTI5 1447 aa26.57■■□□□ 1.84
PHF20-206ENST00000452270 BAZ1AQ9NRL2 1556 aaPredicted RBP26.56■■□□□ 1.84
PHF20-206ENST00000452270 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
PHF20-206ENST00000452270 KIF21AQ7Z4S6 1674 aa26.52■■□□□ 1.84
PHF20-206ENST00000452270 MRC2Q9UBG0 1479 aa26.34■■□□□ 1.81
PHF20-206ENST00000452270 CADPSQ9ULU8 1353 aa26.31■■□□□ 1.8
PHF20-206ENST00000452270 WDR62O43379 1518 aa26.29■■□□□ 1.8
PHF20-206ENST00000452270 MROH2BQ7Z745 1585 aa26.22■■□□□ 1.79
PHF20-206ENST00000452270 OSCARQ8IYS5 282 aa26.18■■□□□ 1.78
PHF20-206ENST00000452270 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
PHF20-206ENST00000452270 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
PHF20-206ENST00000452270 WIZO95785 1651 aa25.87■■□□□ 1.73
PHF20-206ENST00000452270 CFTRP13569 1480 aa25.85■■□□□ 1.73
PHF20-206ENST00000452270 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
PHF20-206ENST00000452270 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
PHF20-206ENST00000452270 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
PHF20-206ENST00000452270 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
PHF20-206ENST00000452270 ARHGEF11O15085 1522 aa25.71■■□□□ 1.71
PHF20-206ENST00000452270 IFT140Q96RY7 1462 aa25.62■■□□□ 1.69
PHF20-206ENST00000452270 CYB5RLQ6IPT4 315 aa25.56■■□□□ 1.68
PHF20-206ENST00000452270 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
PHF20-206ENST00000452270 ZNF608Q9ULD9 1512 aaPredicted RBP25.55■■□□□ 1.68
PHF20-206ENST00000452270 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
PHF20-206ENST00000452270 TRHP20396 242 aaPredicted RBP25.53■■□□□ 1.68
PHF20-206ENST00000452270 RSF1Q96T23 1441 aaPredicted RBP25.45■■□□□ 1.66
PHF20-206ENST00000452270 EIF4G3O43432 1585 aaKnown RBP25.42■■□□□ 1.66
PHF20-206ENST00000452270 ABCC8Q09428 1581 aa25.41■■□□□ 1.66
PHF20-206ENST00000452270 TOPBP1Q92547 1522 aa25.41■■□□□ 1.66
PHF20-206ENST00000452270 ARAP1Q96P48 1450 aa25.39■■□□□ 1.65
PHF20-206ENST00000452270 CHD1O14646 1710 aa25.34■■□□□ 1.65
PHF20-206ENST00000452270 AEBP2Q6ZN18 517 aaPredicted RBP25.34■■□□□ 1.65
PHF20-206ENST00000452270 DNMBPQ6XZF7 1577 aa25.27■■□□□ 1.64
PHF20-206ENST00000452270 FBLN2P98095 1184 aa25.26■■□□□ 1.63
PHF20-206ENST00000452270 AQRO60306 1485 aaKnown RBP eCLIP25.25■■□□□ 1.632e-7■■■□□ 16.8
PHF20-206ENST00000452270 CCDC88BA6NC98 1476 aa25.24■■□□□ 1.63
PHF20-206ENST00000452270 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
PHF20-206ENST00000452270 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
PHF20-206ENST00000452270 CLASP1Q7Z460 1538 aa25.06■■□□□ 1.6
PHF20-206ENST00000452270 SYNJ1O43426 1573 aa25.04■■□□□ 1.6
PHF20-206ENST00000452270 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
PHF20-206ENST00000452270 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
PHF20-206ENST00000452270 SOGA1O94964 1423 aa25■■□□□ 1.59
PHF20-206ENST00000452270 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
PHF20-206ENST00000452270 TDRD9Q8NDG6 1382 aaKnown RBP24.99■■□□□ 1.59
PHF20-206ENST00000452270 RAD54L2Q9Y4B4 1467 aa24.97■■□□□ 1.59
PHF20-206ENST00000452270 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
PHF20-206ENST00000452270 SYNJ2O15056 1496 aa24.88■■□□□ 1.57
PHF20-206ENST00000452270 GRIN2BQ13224 1484 aa24.88■■□□□ 1.57
PHF20-206ENST00000452270 GAPVD1Q14C86 1478 aa24.86■■□□□ 1.57
PHF20-206ENST00000452270 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.57
PHF20-206ENST00000452270 PBRM1Q86U86 1689 aa24.69■■□□□ 1.54
PHF20-206ENST00000452270 CUX1P39880 1505 aa24.69■■□□□ 1.54
PHF20-206ENST00000452270 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
PHF20-206ENST00000452270 ABCA5Q8WWZ7 1642 aa24.55■■□□□ 1.52
PHF20-206ENST00000452270 GRIN2AQ12879 1464 aa24.54■■□□□ 1.52
PHF20-206ENST00000452270 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
PHF20-206ENST00000452270 CEP170Q5SW79 1584 aa24.52■■□□□ 1.52
PHF20-206ENST00000452270 NUP160Q12769 1436 aa24.48■■□□□ 1.51
PHF20-206ENST00000452270 KIF13AQ9H1H9 1805 aa24.47■■□□□ 1.51
PHF20-206ENST00000452270 SHROOM2Q13796 1616 aa24.45■■□□□ 1.5
PHF20-206ENST00000452270 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
PHF20-206ENST00000452270 FHAD1B1AJZ9 1412 aa24.36■■□□□ 1.49
PHF20-206ENST00000452270 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
PHF20-206ENST00000452270 ABCC10Q5T3U5 1492 aa24.32■■□□□ 1.48
PHF20-206ENST00000452270 FAM69CQ0P6D2 419 aa24.31■■□□□ 1.48
PHF20-206ENST00000452270 NPM1P06748 294 aaKnown RBP eCLIP24.3■■□□□ 1.48
PHF20-206ENST00000452270 PRG4Q92954 1404 aaPredicted RBP24.29■■□□□ 1.48
PHF20-206ENST00000452270 MAPKBP1O60336 1514 aa24.25■■□□□ 1.47
PHF20-206ENST00000452270 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms