RNA–Protein interactions for RNA: ENST00000563961.5

USP7-208, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 5

Gene USP7, Length 4,533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-208ENST00000563961 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
USP7-208ENST00000563961 DCAF8L2P0C7V8 631 aa25.04■■□□□ 1.6
USP7-208ENST00000563961 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
USP7-208ENST00000563961 SUPT5HO00267 1087 aaKnown RBP24.4■■□□□ 1.5
USP7-208ENST00000563961 EHMT2Q96KQ7 1210 aa23.39■■□□□ 1.33
USP7-208ENST00000563961 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
USP7-208ENST00000563961 FAM9AQ8IZU1 332 aaPredicted RBP22.88■■□□□ 1.25
USP7-208ENST00000563961 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
USP7-208ENST00000563961 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
USP7-208ENST00000563961 TTBK1Q5TCY1 1321 aaPredicted RBP22.58■■□□□ 1.21
USP7-208ENST00000563961 LOC105371045A0A1W2PR82 267 aa22.39■■□□□ 1.18
USP7-208ENST00000563961 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
USP7-208ENST00000563961 PPARGC1BQ86YN6 1023 aaKnown RBP22.29■■□□□ 1.16
USP7-208ENST00000563961 HRCP23327 699 aa22.26■■□□□ 1.15
USP7-208ENST00000563961 CCDC180Q9P1Z9 1646 aa22.13■■□□□ 1.13
USP7-208ENST00000563961 ABCC9O60706 1549 aa22.11■■□□□ 1.13
USP7-208ENST00000563961 APLP2Q06481 763 aa22.09■■□□□ 1.13
USP7-208ENST00000563961 RANGAP1P46060 587 aaPredicted RBP22.04■■□□□ 1.12
USP7-208ENST00000563961 TRIM26Q12899 539 aaPredicted RBP22.02■■□□□ 1.12
USP7-208ENST00000563961 ZEB1P37275 1124 aaPredicted RBP21.98■■□□□ 1.11
USP7-208ENST00000563961 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
USP7-208ENST00000563961 CCER1Q8TC90 406 aaPredicted RBP21.97■■□□□ 1.11
USP7-208ENST00000563961 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
USP7-208ENST00000563961 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.062e-6■■□□□ 12.3
USP7-208ENST00000563961 YTHDC1Q96MU7 727 aaKnown RBP21.67■■□□□ 1.06
USP7-208ENST00000563961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
USP7-208ENST00000563961 CENPBP07199 599 aaPredicted RBP21.52■■□□□ 1.04
USP7-208ENST00000563961 MYO15BQ96JP2 1530 aa21.49■■□□□ 1.03
USP7-208ENST00000563961 ATP1B4Q9UN42 357 aaPredicted RBP21.43■■□□□ 1.02
USP7-208ENST00000563961 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
USP7-208ENST00000563961 RSF1Q96T23 1441 aaPredicted RBP21.34■■□□□ 1.01
USP7-208ENST00000563961 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
USP7-208ENST00000563961 PELP1Q8IZL8 1130 aaKnown RBP21.19■□□□□ 0.98
USP7-208ENST00000563961 ITGAEP38570 1179 aa21.19■□□□□ 0.98
USP7-208ENST00000563961 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
USP7-208ENST00000563961 DIEXFQ68CQ4 756 aaKnown RBP21.12■□□□□ 0.97
USP7-208ENST00000563961 NACADO15069 1562 aa21.1■□□□□ 0.97
USP7-208ENST00000563961 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
USP7-208ENST00000563961 CECR2Q9BXF3 1484 aa21■□□□□ 0.95
USP7-208ENST00000563961 GTF3C3Q9Y5Q9 886 aa20.92■□□□□ 0.94
USP7-208ENST00000563961 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
USP7-208ENST00000563961 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
USP7-208ENST00000563961 FAM50AQ14320 339 aaKnown RBP20.71■□□□□ 0.91
USP7-208ENST00000563961 ACIN1Q9UKV3 1341 aaKnown RBP20.69■□□□□ 0.9
USP7-208ENST00000563961 SCAF1Q9H7N4 1312 aaKnown RBP20.67■□□□□ 0.9
USP7-208ENST00000563961 CNGB1Q14028 1251 aaPredicted RBP20.66■□□□□ 0.9
USP7-208ENST00000563961 NEFLP07196 543 aa20.65■□□□□ 0.9
USP7-208ENST00000563961 ZNF316A6NFI3 1004 aaPredicted RBP20.64■□□□□ 0.89
USP7-208ENST00000563961 NEUROD1Q13562 356 aa20.62■□□□□ 0.89
USP7-208ENST00000563961 CEP162Q5TB80 1403 aa20.61■□□□□ 0.89
USP7-208ENST00000563961 P3H3Q8IVL6 736 aa20.6■□□□□ 0.89
USP7-208ENST00000563961 WRNQ14191 1432 aaPredicted RBP eCLIP20.59■□□□□ 0.89
USP7-208ENST00000563961 EEA1Q15075 1411 aa20.58■□□□□ 0.88
USP7-208ENST00000563961 ERICH6Q7L0X2 663 aa20.56■□□□□ 0.88
USP7-208ENST00000563961 BCANQ96GW7 911 aa20.55■□□□□ 0.88
USP7-208ENST00000563961 CLIP1P30622 1438 aa20.53■□□□□ 0.88
USP7-208ENST00000563961 WIZO95785 1651 aa20.53■□□□□ 0.88
USP7-208ENST00000563961 BAZ1BQ9UIG0 1483 aaKnown RBP20.51■□□□□ 0.87
USP7-208ENST00000563961 GOLGA3Q08378 1498 aa20.51■□□□□ 0.87
USP7-208ENST00000563961 TNIKQ9UKE5 1360 aa20.5■□□□□ 0.87
USP7-208ENST00000563961 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
USP7-208ENST00000563961 POLR3GLQ9BT43 218 aa20.48■□□□□ 0.87
USP7-208ENST00000563961 SOGA1O94964 1423 aa20.48■□□□□ 0.87
USP7-208ENST00000563961 ABCC8Q09428 1581 aa20.44■□□□□ 0.86
USP7-208ENST00000563961 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
USP7-208ENST00000563961 TRIM52Q96A61 297 aa20.34■□□□□ 0.85
USP7-208ENST00000563961 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
USP7-208ENST00000563961 MIER1Q8N108 512 aa20.31■□□□□ 0.84
USP7-208ENST00000563961 MYT1Q01538 1121 aa20.28■□□□□ 0.84
USP7-208ENST00000563961 ARID3CA6NKF2 412 aa20.27■□□□□ 0.84
USP7-208ENST00000563961 KIF27Q86VH2 1401 aa20.21■□□□□ 0.83
USP7-208ENST00000563961 FBLN2P98095 1184 aa20.21■□□□□ 0.83
USP7-208ENST00000563961 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
USP7-208ENST00000563961 HIRIP3Q9BW71 556 aaPredicted RBP20.12■□□□□ 0.81
USP7-208ENST00000563961 ANP32CO43423 234 aa20.12■□□□□ 0.81
USP7-208ENST00000563961 SMARCA2P51531 1590 aa20.11■□□□□ 0.81
USP7-208ENST00000563961 DDX10Q13206 875 aaKnown RBP20.09■□□□□ 0.81
USP7-208ENST00000563961 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.81
USP7-208ENST00000563961 MYT1LQ9UL68 1186 aa20.08■□□□□ 0.8
USP7-208ENST00000563961 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
USP7-208ENST00000563961 VPS8Q8N3P4 1428 aa20.05■□□□□ 0.8
USP7-208ENST00000563961 ZNF326Q5BKZ1 582 aaKnown RBP20.03■□□□□ 0.8
USP7-208ENST00000563961 MTUS2Q5JR59 1369 aa20.01■□□□□ 0.79
USP7-208ENST00000563961 TONSLQ96HA7 1378 aa20■□□□□ 0.79
USP7-208ENST00000563961 FKBP8Q14318 412 aa19.99■□□□□ 0.79
USP7-208ENST00000563961 CHIC2Q9UKJ5 165 aa19.98■□□□□ 0.79
USP7-208ENST00000563961 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
USP7-208ENST00000563961 CUX2O14529 1486 aa19.97■□□□□ 0.79
USP7-208ENST00000563961 CDK11AQ9UQ88 783 aaPredicted RBP19.96■□□□□ 0.79
USP7-208ENST00000563961 KANK4Q5T7N3 995 aaPredicted RBP19.94■□□□□ 0.78
USP7-208ENST00000563961 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
USP7-208ENST00000563961 RAPGEF2Q9Y4G8 1499 aa19.91■□□□□ 0.78
USP7-208ENST00000563961 CCNB3Q8WWL7 1395 aa19.88■□□□□ 0.77
USP7-208ENST00000563961 CLSPNQ9HAW4 1339 aa19.84■□□□□ 0.77
USP7-208ENST00000563961 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
USP7-208ENST00000563961 IRX6P78412 446 aaPredicted RBP19.81■□□□□ 0.76
USP7-208ENST00000563961 HNRNPUQ00839 825 aaKnown RBP eCLIP19.79■□□□□ 0.76
USP7-208ENST00000563961 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
USP7-208ENST00000563961 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
USP7-208ENST00000563961 CADPSQ9ULU8 1353 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms