Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.25■■□□□ 1.15
TCRBV5S1A1TA0A578 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV5S1A1TA0A578 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.25■■□□□ 1.15
TCRBV5S1A1TA0A578 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TCRBV5S1A1TA0A578 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.25■■□□□ 1.15
TCRBV5S1A1TA0A578 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV5S1A1TA0A578 AC027612.3-201ENST00000413684 1047 ntBASIC22.24■■□□□ 1.15
TCRBV5S1A1TA0A578 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV5S1A1TA0A578 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV5S1A1TA0A578 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.24■■□□□ 1.15
TCRBV5S1A1TA0A578 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.24■■□□□ 1.15
TCRBV5S1A1TA0A578 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV5S1A1TA0A578 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV5S1A1TA0A578 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV5S1A1TA0A578 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV5S1A1TA0A578 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.23■■□□□ 1.15
TCRBV5S1A1TA0A578 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV5S1A1TA0A578 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV5S1A1TA0A578 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.23■■□□□ 1.15
TCRBV5S1A1TA0A578 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV5S1A1TA0A578 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV5S1A1TA0A578 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
TCRBV5S1A1TA0A578 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV5S1A1TA0A578 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 EEF1DP3-203ENST00000566025 782 ntBASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV5S1A1TA0A578 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
TCRBV5S1A1TA0A578 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
TCRBV5S1A1TA0A578 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.2■■□□□ 1.14
TCRBV5S1A1TA0A578 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 ZNRF2P3-201ENST00000424200 374 ntBASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV5S1A1TA0A578 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.18■■□□□ 1.14
TCRBV5S1A1TA0A578 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TCRBV5S1A1TA0A578 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV5S1A1TA0A578 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV5S1A1TA0A578 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV5S1A1TA0A578 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV5S1A1TA0A578 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms