Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLC4A1-202ENST00000399246 3855 ntTSL 5 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 AC068790.9-201ENST00000621669 2838 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 SF3B6-201ENST00000233468 770 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 MTRF1LP1-201ENST00000321235 679 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 TMEM176A-201ENST00000004103 1261 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 AC130710.1-201ENST00000412381 642 ntTSL 3 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 PYY3-201ENST00000419078 213 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 SLC44A3-AS1-204ENST00000422162 697 ntTSL 3 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 Metazoa_SRP.10-201ENST00000422908 238 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 AP001187.1-201ENST00000428947 411 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 GSG1-205ENST00000457134 1183 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 TLE6-208ENST00000482627 456 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 RN7SL623P-201ENST00000494330 310 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 AC093827.3-201ENST00000514631 1110 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 AC104042.1-201ENST00000524806 883 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 AP003390.2-201ENST00000529229 559 ntTSL 4 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 PHBP21-201ENST00000562636 823 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 AC026355.3-201ENST00000611065 727 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 AL450487.2-201ENST00000615934 407 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 PTPRT-212ENST00000620410 940 ntTSL 5 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 KRBA1-207ENST00000496259 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 L3MBTL3-204ENST00000526019 3243 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 LDLR-208ENST00000558518 3617 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
LMO3Q8TAP4 AC023830.2-201ENST00000563704 1662 ntBASIC11.96□□□□□ -0.5
LMO3Q8TAP4 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
LMO3Q8TAP4 EXOC4-202ENST00000393161 1604 ntTSL 5 BASIC11.96□□□□□ -0.5
LMO3Q8TAP4 STPG1-201ENST00000003583 2544 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
LMO3Q8TAP4 AC025280.2-201ENST00000625056 2547 ntBASIC11.96□□□□□ -0.5
LMO3Q8TAP4 NDST2-207ENST00000639645 2448 ntTSL 5 BASIC11.96□□□□□ -0.5
LMO3Q8TAP4 LINC00485-201ENST00000547179 3722 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LMO3Q8TAP4 SNU13-202ENST00000355257 1503 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LMO3Q8TAP4 EXD2-205ENST00000409675 2828 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LMO3Q8TAP4 CHKB-CPT1B-202ENST00000453634 2816 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
LMO3Q8TAP4 ZNF543-201ENST00000321545 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LMO3Q8TAP4 MUM1-214ENST00000591806 4067 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
LMO3Q8TAP4 PRAMEF36P-202ENST00000448180 1452 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 BTN3A2-209ENST00000527422 1460 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC013643.3-201ENST00000623825 2596 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 ASB11-201ENST00000344384 2168 ntTSL 5 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 SCG3-202ENST00000542355 2163 ntTSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 OLAH-201ENST00000378217 1767 ntTSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 NSD3-203ENST00000433384 5276 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AL031733.2-201ENST00000451992 2523 ntTSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 PCDHGA11-203ENST00000622044 3633 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 FAIM2-205ENST00000550890 2094 ntTSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC092134.2-201ENST00000624876 1692 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 ATF3-211ENST00000613954 2031 ntTSL 5 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 MRPL55-203ENST00000336520 744 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 C1orf52-202ENST00000344356 504 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AZIN2-202ENST00000373440 616 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 NPSR1-206ENST00000381553 856 ntTSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC006450.1-201ENST00000421041 460 ntTSL 3 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AL117328.1-201ENST00000422315 162 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AL590640.1-201ENST00000425205 379 ntTSL 3 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 MRPL55-221ENST00000430433 864 ntTSL 5 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AL109838.1-201ENST00000455132 280 ntTSL 3 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC008677.2-201ENST00000460082 306 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 RN7SL846P-201ENST00000467429 292 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 ELOBP2-201ENST00000526184 355 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 RBM4-212ENST00000532968 757 ntTSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC126177.1-202ENST00000548419 973 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC025265.1-202ENST00000550029 738 ntTSL 5 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC087463.4-201ENST00000561964 448 ntTSL 5 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC018552.4-201ENST00000563251 556 ntTSL 4 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 SKA2-206ENST00000581068 595 ntTSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC078841.1-201ENST00000605782 1183 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 PDE4DIP-247ENST00000618504 567 ntTSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 FAM74A3-201ENST00000620271 472 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC022098.4-201ENST00000622575 352 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC008691.1-205ENST00000635333 1963 ntTSL 5 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 NXF1-211ENST00000531709 4128 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AC016590.1-205ENST00000612804 2303 ntBASIC11.95□□□□□ -0.5
LMO3Q8TAP4 ANKRD13C-201ENST00000262346 3327 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 CTAGE5-206ENST00000396158 3695 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 ZNF383-207ENST00000589413 2268 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 ZNF608-210ENST00000613878 3190 ntTSL 5 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 TPCN1-204ENST00000541517 5173 ntTSL 5 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 AP5M1-202ENST00000431972 1815 ntTSL 2 BASIC11.95□□□□□ -0.5
LMO3Q8TAP4 TRAPPC9-202ENST00000438773 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 IL36RN-201ENST00000346807 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms