RNA–Protein interactions for RNA: ENST00000479013.6

IVD-203, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene IVD, Length 4,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-203ENST00000479013 PELP1Q8IZL8 1130 aaKnown RBP19.83■□□□□ 0.77
IVD-203ENST00000479013 NISCHQ9Y2I1 1504 aa19.71■□□□□ 0.75
IVD-203ENST00000479013 HRCP23327 699 aa19.48■□□□□ 0.71
IVD-203ENST00000479013 MYT1Q01538 1121 aa19.33■□□□□ 0.68
IVD-203ENST00000479013 PCGF6Q9BYE7 350 aa19.3■□□□□ 0.68
IVD-203ENST00000479013 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
IVD-203ENST00000479013 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
IVD-203ENST00000479013 SHROOM4Q9ULL8 1493 aa18.75■□□□□ 0.59
IVD-203ENST00000479013 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
IVD-203ENST00000479013 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
IVD-203ENST00000479013 CENPBP07199 599 aaPredicted RBP18.51■□□□□ 0.55
IVD-203ENST00000479013 TRIM26Q12899 539 aaPredicted RBP18.4■□□□□ 0.54
IVD-203ENST00000479013 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
IVD-203ENST00000479013 GTF3C3Q9Y5Q9 886 aa18.25■□□□□ 0.51
IVD-203ENST00000479013 ACIN1Q9UKV3 1341 aaKnown RBP18.22■□□□□ 0.51
IVD-203ENST00000479013 LOC105371045A0A1W2PR82 267 aa18.12■□□□□ 0.49
IVD-203ENST00000479013 DCAF8L2P0C7V8 631 aa18.06■□□□□ 0.48
IVD-203ENST00000479013 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
IVD-203ENST00000479013 YTHDC1Q96MU7 727 aaKnown RBP18.03■□□□□ 0.48
IVD-203ENST00000479013 TTBK1Q5TCY1 1321 aaPredicted RBP18.01■□□□□ 0.47
IVD-203ENST00000479013 CCER1Q8TC90 406 aaPredicted RBP18.01■□□□□ 0.47
IVD-203ENST00000479013 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
IVD-203ENST00000479013 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
IVD-203ENST00000479013 MYO15BQ96JP2 1530 aa17.9■□□□□ 0.46
IVD-203ENST00000479013 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
IVD-203ENST00000479013 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
IVD-203ENST00000479013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
IVD-203ENST00000479013 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
IVD-203ENST00000479013 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
IVD-203ENST00000479013 CCDC180Q9P1Z9 1646 aa17.54■□□□□ 0.4
IVD-203ENST00000479013 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
IVD-203ENST00000479013 ANP32EQ9BTT0 268 aa17.45■□□□□ 0.38
IVD-203ENST00000479013 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
IVD-203ENST00000479013 NEFLP07196 543 aa17.25■□□□□ 0.35
IVD-203ENST00000479013 MIER1Q8N108 512 aa17.2■□□□□ 0.34
IVD-203ENST00000479013 BCANQ96GW7 911 aa17.2■□□□□ 0.34
IVD-203ENST00000479013 CLSPNQ9HAW4 1339 aa17.19■□□□□ 0.34
IVD-203ENST00000479013 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
IVD-203ENST00000479013 SUPT16HQ9Y5B9 1047 aaKnown RBP17.05■□□□□ 0.32
IVD-203ENST00000479013 TSHZ2Q9NRE2 1034 aa17.01■□□□□ 0.31
IVD-203ENST00000479013 PRKCSHP14314 528 aaPredicted RBP17■□□□□ 0.31
IVD-203ENST00000479013 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
IVD-203ENST00000479013 APLP2Q06481 763 aa17■□□□□ 0.31
IVD-203ENST00000479013 FKBP8Q14318 412 aa16.91■□□□□ 0.3
IVD-203ENST00000479013 UBTFP17480 764 aaKnown RBP16.86■□□□□ 0.29
IVD-203ENST00000479013 MYT1LQ9UL68 1186 aa16.82■□□□□ 0.28
IVD-203ENST00000479013 CDK11AQ9UQ88 783 aaPredicted RBP16.79■□□□□ 0.28
IVD-203ENST00000479013 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
IVD-203ENST00000479013 RBM19Q9Y4C8 960 aaKnown RBP16.76■□□□□ 0.27
IVD-203ENST00000479013 ITGAEP38570 1179 aa16.73■□□□□ 0.27
IVD-203ENST00000479013 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
IVD-203ENST00000479013 RANGAP1P46060 587 aaPredicted RBP16.64■□□□□ 0.25
IVD-203ENST00000479013 DEKP35659 375 aaKnown RBP16.63■□□□□ 0.25
IVD-203ENST00000479013 NBR1Q14596 966 aa16.62■□□□□ 0.25
IVD-203ENST00000479013 EIF5BO60841 1220 aaKnown RBP16.57■□□□□ 0.24
IVD-203ENST00000479013 TRIM52Q96A61 297 aa16.5■□□□□ 0.23
IVD-203ENST00000479013 ANO8Q9HCE9 1232 aaPredicted RBP16.48■□□□□ 0.23
IVD-203ENST00000479013 RTN4Q9NQC3 1192 aaKnown RBP16.46■□□□□ 0.23
IVD-203ENST00000479013 ANP32CO43423 234 aa16.45■□□□□ 0.22
IVD-203ENST00000479013 DDX10Q13206 875 aaKnown RBP16.42■□□□□ 0.22
IVD-203ENST00000479013 CCDC136Q96JN2 1154 aa16.41■□□□□ 0.22
IVD-203ENST00000479013 IRX6P78412 446 aaPredicted RBP16.4■□□□□ 0.22
IVD-203ENST00000479013 ANP32AP39687 249 aaKnown RBP16.4■□□□□ 0.22
IVD-203ENST00000479013 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.36■□□□□ 0.21
IVD-203ENST00000479013 ERICH6BQ5W0A0 696 aa16.34■□□□□ 0.21
IVD-203ENST00000479013 NOP58Q9Y2X3 529 aaKnown RBP16.32■□□□□ 0.2
IVD-203ENST00000479013 ZBTB47Q9UFB7 747 aaPredicted RBP16.31■□□□□ 0.2
IVD-203ENST00000479013 FANCIQ9NVI1 1328 aa16.31■□□□□ 0.2
IVD-203ENST00000479013 HNRNPUQ00839 825 aaKnown RBP eCLIP16.29■□□□□ 0.2
IVD-203ENST00000479013 KCNH8Q96L42 1107 aa16.29■□□□□ 0.2
IVD-203ENST00000479013 SALL2Q9Y467 1007 aaPredicted RBP16.28■□□□□ 0.2
IVD-203ENST00000479013 MSH5O43196 834 aa16.28■□□□□ 0.2
IVD-203ENST00000479013 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
IVD-203ENST00000479013 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
IVD-203ENST00000479013 GLIPR1L2Q4G1C9 344 aa16.22■□□□□ 0.19
IVD-203ENST00000479013 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.19
IVD-203ENST00000479013 RSF1Q96T23 1441 aaPredicted RBP16.16■□□□□ 0.18
IVD-203ENST00000479013 PPP4R2Q9NY27 417 aa16.15■□□□□ 0.18
IVD-203ENST00000479013 HIRIP3Q9BW71 556 aaPredicted RBP16.13■□□□□ 0.17
IVD-203ENST00000479013 B4GALNT3Q6L9W6 998 aa16.1■□□□□ 0.17
IVD-203ENST00000479013 TNIKQ9UKE5 1360 aa16.09■□□□□ 0.17
IVD-203ENST00000479013 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
IVD-203ENST00000479013 NEFMP07197 916 aa16.07■□□□□ 0.16
IVD-203ENST00000479013 IL27Q8NEV9 243 aa16.07■□□□□ 0.16
IVD-203ENST00000479013 CNGB1Q14028 1251 aaPredicted RBP16.05■□□□□ 0.16
IVD-203ENST00000479013 LAS1LQ9Y4W2 734 aaKnown RBP16.04■□□□□ 0.16
IVD-203ENST00000479013 CCER2I3L3R5 266 aa16.04■□□□□ 0.16
IVD-203ENST00000479013 UBE2Q2Q8WVN8 375 aa16.02■□□□□ 0.16
IVD-203ENST00000479013 ATP1B4Q9UN42 357 aaPredicted RBP16■□□□□ 0.15
IVD-203ENST00000479013 FAM9BQ8IZU0 186 aa15.99■□□□□ 0.15
IVD-203ENST00000479013 IPO9Q96P70 1041 aaKnown RBP15.98■□□□□ 0.15
IVD-203ENST00000479013 RB1CC1Q8TDY2 1594 aa15.97■□□□□ 0.15
IVD-203ENST00000479013 PPM1GO15355 546 aaPredicted RBP15.96■□□□□ 0.14
IVD-203ENST00000479013 FAM50AQ14320 339 aaKnown RBP15.94■□□□□ 0.14
IVD-203ENST00000479013 CLIP1P30622 1438 aa15.94■□□□□ 0.14
IVD-203ENST00000479013 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
IVD-203ENST00000479013 PKNOX2Q96KN3 472 aa15.92■□□□□ 0.14
IVD-203ENST00000479013 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
IVD-203ENST00000479013 POLR3GLQ9BT43 218 aa15.9■□□□□ 0.14
IVD-203ENST00000479013 GOLGA3Q08378 1498 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms