RNA–Protein interactions for RNA: ENST00000321235.10

MTRF1LP1-201, Transcript of mitochondrial translational release factor 1 like pseudogene 1, humanhuman

BASIC

Gene MTRF1LP1, Length 679 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1LP1-201ENST00000321235 NISCHQ9Y2I1 1504 aa27.63■■■□□ 2.01
MTRF1LP1-201ENST00000321235 CCDC180Q9P1Z9 1646 aa24.57■■□□□ 1.52
MTRF1LP1-201ENST00000321235 ABCC9O60706 1549 aa24.15■■□□□ 1.46
MTRF1LP1-201ENST00000321235 RB1CC1Q8TDY2 1594 aa23.2■■□□□ 1.3
MTRF1LP1-201ENST00000321235 NACADO15069 1562 aa23.18■■□□□ 1.3
MTRF1LP1-201ENST00000321235 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.29
MTRF1LP1-201ENST00000321235 MYO15BQ96JP2 1530 aa23.07■■□□□ 1.28
MTRF1LP1-201ENST00000321235 ZCCHC6Q5VYS8 1495 aaKnown RBP22.99■■□□□ 1.27
MTRF1LP1-201ENST00000321235 DCAF1Q9Y4B6 1507 aa22.91■■□□□ 1.26
MTRF1LP1-201ENST00000321235 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
MTRF1LP1-201ENST00000321235 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.2
MTRF1LP1-201ENST00000321235 BICRAQ9NZM4 1560 aa22.5■■□□□ 1.19
MTRF1LP1-201ENST00000321235 SCRIBQ14160 1630 aa22.36■■□□□ 1.17
MTRF1LP1-201ENST00000321235 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.16
MTRF1LP1-201ENST00000321235 DNAJC5BQ9UF47 199 aa22.32■■□□□ 1.16
MTRF1LP1-201ENST00000321235 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
MTRF1LP1-201ENST00000321235 CC2D2AQ9P2K1 1620 aa21.84■■□□□ 1.09
MTRF1LP1-201ENST00000321235 CECR2Q9BXF3 1484 aa21.73■■□□□ 1.07
MTRF1LP1-201ENST00000321235 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
MTRF1LP1-201ENST00000321235 SMARCA4P51532 1647 aa21.43■■□□□ 1.02
MTRF1LP1-201ENST00000321235 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
MTRF1LP1-201ENST00000321235 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.01
MTRF1LP1-201ENST00000321235 SMARCA2P51531 1590 aa21.34■■□□□ 1.01
MTRF1LP1-201ENST00000321235 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
MTRF1LP1-201ENST00000321235 HMGXB3Q12766 1538 aa21.27■■□□□ 1
MTRF1LP1-201ENST00000321235 MROH2BQ7Z745 1585 aa21.27■□□□□ 0.99
MTRF1LP1-201ENST00000321235 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
MTRF1LP1-201ENST00000321235 RSF1Q96T23 1441 aaPredicted RBP21.02■□□□□ 0.96
MTRF1LP1-201ENST00000321235 WIZO95785 1651 aa20.99■□□□□ 0.95
MTRF1LP1-201ENST00000321235 NESP48681 1621 aa20.86■□□□□ 0.93
MTRF1LP1-201ENST00000321235 LAMC3Q9Y6N6 1575 aa20.83■□□□□ 0.92
MTRF1LP1-201ENST00000321235 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
MTRF1LP1-201ENST00000321235 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
MTRF1LP1-201ENST00000321235 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
MTRF1LP1-201ENST00000321235 PDS5BQ9NTI5 1447 aa20.72■□□□□ 0.91
MTRF1LP1-201ENST00000321235 CUX2O14529 1486 aa20.69■□□□□ 0.9
MTRF1LP1-201ENST00000321235 CFTRP13569 1480 aa20.63■□□□□ 0.89
MTRF1LP1-201ENST00000321235 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
MTRF1LP1-201ENST00000321235 THOC2Q8NI27 1593 aaKnown RBP20.57■□□□□ 0.88
MTRF1LP1-201ENST00000321235 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
MTRF1LP1-201ENST00000321235 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
MTRF1LP1-201ENST00000321235 MRC2Q9UBG0 1479 aa20.48■□□□□ 0.87
MTRF1LP1-201ENST00000321235 CEP164Q9UPV0 1460 aa20.48■□□□□ 0.87
MTRF1LP1-201ENST00000321235 WDR62O43379 1518 aa20.42■□□□□ 0.86
MTRF1LP1-201ENST00000321235 SUPT5HO00267 1087 aaKnown RBP20.34■□□□□ 0.85
MTRF1LP1-201ENST00000321235 PRDM2Q13029 1718 aa20.33■□□□□ 0.85
MTRF1LP1-201ENST00000321235 URB2Q14146 1524 aaKnown RBP20.3■□□□□ 0.84
MTRF1LP1-201ENST00000321235 DNAJC5Q9H3Z4 198 aa20.23■□□□□ 0.83
MTRF1LP1-201ENST00000321235 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
MTRF1LP1-201ENST00000321235 TOPBP1Q92547 1522 aa20.16■□□□□ 0.82
MTRF1LP1-201ENST00000321235 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
MTRF1LP1-201ENST00000321235 IFT140Q96RY7 1462 aa20.08■□□□□ 0.81
MTRF1LP1-201ENST00000321235 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
MTRF1LP1-201ENST00000321235 ZNF608Q9ULD9 1512 aaPredicted RBP19.97■□□□□ 0.79
MTRF1LP1-201ENST00000321235 CUX1P39880 1505 aa19.96■□□□□ 0.79
MTRF1LP1-201ENST00000321235 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
MTRF1LP1-201ENST00000321235 SOGA1O94964 1423 aa19.93■□□□□ 0.78
MTRF1LP1-201ENST00000321235 FGD5Q6ZNL6 1462 aa19.91■□□□□ 0.78
MTRF1LP1-201ENST00000321235 RAD54L2Q9Y4B4 1467 aa19.88■□□□□ 0.77
MTRF1LP1-201ENST00000321235 EIF4G3O43432 1585 aaKnown RBP19.86■□□□□ 0.77
MTRF1LP1-201ENST00000321235 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.77
MTRF1LP1-201ENST00000321235 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
MTRF1LP1-201ENST00000321235 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
MTRF1LP1-201ENST00000321235 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
MTRF1LP1-201ENST00000321235 TDRD9Q8NDG6 1382 aaKnown RBP19.81■□□□□ 0.76
MTRF1LP1-201ENST00000321235 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
MTRF1LP1-201ENST00000321235 BIVM-ERCC5R4GMW8 1640 aa19.74■□□□□ 0.75
MTRF1LP1-201ENST00000321235 ABCA10Q8WWZ4 1543 aa19.74■□□□□ 0.75
MTRF1LP1-201ENST00000321235 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
MTRF1LP1-201ENST00000321235 GRIN2BQ13224 1484 aa19.69■□□□□ 0.74
MTRF1LP1-201ENST00000321235 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
MTRF1LP1-201ENST00000321235 MAGI1Q96QZ7 1491 aaPredicted RBP19.66■□□□□ 0.74
MTRF1LP1-201ENST00000321235 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
MTRF1LP1-201ENST00000321235 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
MTRF1LP1-201ENST00000321235 FBLN2P98095 1184 aa19.61■□□□□ 0.73
MTRF1LP1-201ENST00000321235 CHMP7Q8WUX9 453 aaPredicted RBP19.58■□□□□ 0.72
MTRF1LP1-201ENST00000321235 SYNJ2O15056 1496 aa19.58■□□□□ 0.72
MTRF1LP1-201ENST00000321235 CHD1O14646 1710 aa19.57■□□□□ 0.72
MTRF1LP1-201ENST00000321235 PBRM1Q86U86 1689 aa19.56■□□□□ 0.72
MTRF1LP1-201ENST00000321235 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
MTRF1LP1-201ENST00000321235 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
MTRF1LP1-201ENST00000321235 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
MTRF1LP1-201ENST00000321235 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
MTRF1LP1-201ENST00000321235 RIMBP3CA6NJZ7 1639 aa19.44■□□□□ 0.7
MTRF1LP1-201ENST00000321235 RIMBP3BA6NNM3 1639 aa19.44■□□□□ 0.7
MTRF1LP1-201ENST00000321235 RIMBP3Q9UFD9 1639 aa19.44■□□□□ 0.7
MTRF1LP1-201ENST00000321235 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
MTRF1LP1-201ENST00000321235 GRIN2AQ12879 1464 aa19.43■□□□□ 0.7
MTRF1LP1-201ENST00000321235 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
MTRF1LP1-201ENST00000321235 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
MTRF1LP1-201ENST00000321235 IGF1RP08069 1367 aa19.38■□□□□ 0.69
MTRF1LP1-201ENST00000321235 NUP160Q12769 1436 aa19.37■□□□□ 0.69
MTRF1LP1-201ENST00000321235 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
MTRF1LP1-201ENST00000321235 ARAP1Q96P48 1450 aa19.3■□□□□ 0.68
MTRF1LP1-201ENST00000321235 CYB5RLQ6IPT4 315 aa19.3■□□□□ 0.68
MTRF1LP1-201ENST00000321235 CUL7Q14999 1698 aa19.26■□□□□ 0.67
MTRF1LP1-201ENST00000321235 CARMIL1Q5VZK9 1371 aa19.24■□□□□ 0.67
MTRF1LP1-201ENST00000321235 SHROOM2Q13796 1616 aa19.21■□□□□ 0.67
MTRF1LP1-201ENST00000321235 JPH4Q96JJ6 628 aa19.19■□□□□ 0.66
MTRF1LP1-201ENST00000321235 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms