RNA–Protein interactions for RNA: ENST00000433384.6

NSD3-203, Transcript of nuclear receptor binding SET domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NSD3, Length 5,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSD3-203ENST00000433384 NISCHQ9Y2I1 1504 aa22.05■■□□□ 1.12
NSD3-203ENST00000433384 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
NSD3-203ENST00000433384 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
NSD3-203ENST00000433384 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
NSD3-203ENST00000433384 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
NSD3-203ENST00000433384 FAM9AQ8IZU1 332 aaPredicted RBP19.27■□□□□ 0.68
NSD3-203ENST00000433384 ABCC9O60706 1549 aa19.24■□□□□ 0.67
NSD3-203ENST00000433384 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
NSD3-203ENST00000433384 RANGAP1P46060 587 aaPredicted RBP18.91■□□□□ 0.62
NSD3-203ENST00000433384 TRIM41Q8WV44 630 aa18.91■□□□□ 0.62
NSD3-203ENST00000433384 TTBK1Q5TCY1 1321 aaPredicted RBP18.84■□□□□ 0.61
NSD3-203ENST00000433384 APLP2Q06481 763 aa18.71■□□□□ 0.59
NSD3-203ENST00000433384 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
NSD3-203ENST00000433384 ATP1B4Q9UN42 357 aaPredicted RBP18.55■□□□□ 0.56
NSD3-203ENST00000433384 PCGF6Q9BYE7 350 aa18.43■□□□□ 0.54
NSD3-203ENST00000433384 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
NSD3-203ENST00000433384 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
NSD3-203ENST00000433384 LOC105371045A0A1W2PR82 267 aa18.32■□□□□ 0.52
NSD3-203ENST00000433384 ZCCHC6Q5VYS8 1495 aaKnown RBP18.24■□□□□ 0.51
NSD3-203ENST00000433384 SCRIBQ14160 1630 aa18.19■□□□□ 0.5
NSD3-203ENST00000433384 CCDC180Q9P1Z9 1646 aa18.17■□□□□ 0.5
NSD3-203ENST00000433384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.03■□□□□ 0.48
NSD3-203ENST00000433384 HNRNPUL2Q1KMD3 747 aaKnown RBP18.03■□□□□ 0.48
NSD3-203ENST00000433384 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
NSD3-203ENST00000433384 ITGAEP38570 1179 aa17.93■□□□□ 0.46
NSD3-203ENST00000433384 FBLN2P98095 1184 aa17.87■□□□□ 0.45
NSD3-203ENST00000433384 RB1CC1Q8TDY2 1594 aa17.81■□□□□ 0.44
NSD3-203ENST00000433384 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
NSD3-203ENST00000433384 TRIM26Q12899 539 aaPredicted RBP17.69■□□□□ 0.42
NSD3-203ENST00000433384 NACADO15069 1562 aa17.67■□□□□ 0.42
NSD3-203ENST00000433384 P3H3Q8IVL6 736 aa17.65■□□□□ 0.42
NSD3-203ENST00000433384 CSRNP3Q8WYN3 585 aa17.61■□□□□ 0.41
NSD3-203ENST00000433384 ARID3CA6NKF2 412 aa17.6■□□□□ 0.41
NSD3-203ENST00000433384 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
NSD3-203ENST00000433384 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
NSD3-203ENST00000433384 FAM50AQ14320 339 aaKnown RBP17.5■□□□□ 0.39
NSD3-203ENST00000433384 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
NSD3-203ENST00000433384 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
NSD3-203ENST00000433384 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
NSD3-203ENST00000433384 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
NSD3-203ENST00000433384 POLR3GLQ9BT43 218 aa17.32■□□□□ 0.36
NSD3-203ENST00000433384 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
NSD3-203ENST00000433384 TRIM52Q96A61 297 aa17.27■□□□□ 0.35
NSD3-203ENST00000433384 HRCP23327 699 aa17.22■□□□□ 0.35
NSD3-203ENST00000433384 BAZ1AQ9NRL2 1556 aaPredicted RBP17.22■□□□□ 0.35
NSD3-203ENST00000433384 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.35
NSD3-203ENST00000433384 CHMP7Q8WUX9 453 aaPredicted RBP17.2■□□□□ 0.34
NSD3-203ENST00000433384 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
NSD3-203ENST00000433384 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
NSD3-203ENST00000433384 NEUROD1Q13562 356 aa17.17■□□□□ 0.34
NSD3-203ENST00000433384 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
NSD3-203ENST00000433384 CENPBP07199 599 aaPredicted RBP17.1■□□□□ 0.33
NSD3-203ENST00000433384 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
NSD3-203ENST00000433384 CDK11AQ9UQ88 783 aaPredicted RBP17.06■□□□□ 0.32
NSD3-203ENST00000433384 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
NSD3-203ENST00000433384 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
NSD3-203ENST00000433384 MYO15BQ96JP2 1530 aa17.02■□□□□ 0.31
NSD3-203ENST00000433384 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
NSD3-203ENST00000433384 CCDC88BA6NC98 1476 aa16.97■□□□□ 0.31
NSD3-203ENST00000433384 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
NSD3-203ENST00000433384 CLIP1P30622 1438 aa16.92■□□□□ 0.3
NSD3-203ENST00000433384 ESF1Q9H501 851 aaKnown RBP16.92■□□□□ 0.3
NSD3-203ENST00000433384 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
NSD3-203ENST00000433384 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
NSD3-203ENST00000433384 WIZO95785 1651 aa16.9■□□□□ 0.3
NSD3-203ENST00000433384 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
NSD3-203ENST00000433384 SOGA1O94964 1423 aa16.87■□□□□ 0.29
NSD3-203ENST00000433384 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
NSD3-203ENST00000433384 MTUS2Q5JR59 1369 aa16.84■□□□□ 0.29
NSD3-203ENST00000433384 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
NSD3-203ENST00000433384 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
NSD3-203ENST00000433384 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.29
NSD3-203ENST00000433384 TDRD9Q8NDG6 1382 aaKnown RBP16.82■□□□□ 0.28
NSD3-203ENST00000433384 CUX2O14529 1486 aa16.81■□□□□ 0.28
NSD3-203ENST00000433384 CEP162Q5TB80 1403 aa16.8■□□□□ 0.28
NSD3-203ENST00000433384 EEA1Q15075 1411 aa16.79■□□□□ 0.28
NSD3-203ENST00000433384 GOLGA3Q08378 1498 aa16.79■□□□□ 0.28
NSD3-203ENST00000433384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■■□□□ 12
NSD3-203ENST00000433384 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
NSD3-203ENST00000433384 BCANQ96GW7 911 aa16.77■□□□□ 0.28
NSD3-203ENST00000433384 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
NSD3-203ENST00000433384 CHGAP10645 457 aaKnown RBP16.75■□□□□ 0.27
NSD3-203ENST00000433384 NEFLP07196 543 aa16.75■□□□□ 0.27
NSD3-203ENST00000433384 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
NSD3-203ENST00000433384 CARMIL1Q5VZK9 1371 aa16.75■□□□□ 0.27
NSD3-203ENST00000433384 PLEKHD1A6NEE1 506 aa16.74■□□□□ 0.27
NSD3-203ENST00000433384 TSPY4P0CV99 314 aa16.73■□□□□ 0.27
NSD3-203ENST00000433384 TSPY10P0CW01 314 aa16.73■□□□□ 0.27
NSD3-203ENST00000433384 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
NSD3-203ENST00000433384 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
NSD3-203ENST00000433384 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
NSD3-203ENST00000433384 CEP164Q9UPV0 1460 aa16.69■□□□□ 0.26
NSD3-203ENST00000433384 TNIKQ9UKE5 1360 aa16.68■□□□□ 0.26
NSD3-203ENST00000433384 SENP3Q9H4L4 574 aaPredicted RBP16.65■□□□□ 0.26
NSD3-203ENST00000433384 ERICH6Q7L0X2 663 aa16.63■□□□□ 0.25
NSD3-203ENST00000433384 STAG3Q9UJ98 1225 aa16.62■□□□□ 0.25
NSD3-203ENST00000433384 EIF4G1Q04637 1599 aaKnown RBP16.62■□□□□ 0.25
NSD3-203ENST00000433384 CFDP1Q9UEE9 299 aaPredicted RBP16.6■□□□□ 0.25
NSD3-203ENST00000433384 ZNF316A6NFI3 1004 aaPredicted RBP16.56■□□□□ 0.24
NSD3-203ENST00000433384 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms