RNA–Protein interactions for RNA: ENST00000453634.5

CHKB-CPT1B-202, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHKB-CPT1B, Length 2,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-202ENST00000453634 NISCHQ9Y2I1 1504 aa21.81■■□□□ 1.08
CHKB-CPT1B-202ENST00000453634 HRCP23327 699 aa18.85■□□□□ 0.61
CHKB-CPT1B-202ENST00000453634 SHROOM4Q9ULL8 1493 aa18.8■□□□□ 0.6
CHKB-CPT1B-202ENST00000453634 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
CHKB-CPT1B-202ENST00000453634 MYO15BQ96JP2 1530 aa18.57■□□□□ 0.56
CHKB-CPT1B-202ENST00000453634 ZCCHC6Q5VYS8 1495 aaKnown RBP18.56■□□□□ 0.56
CHKB-CPT1B-202ENST00000453634 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.55
CHKB-CPT1B-202ENST00000453634 PCGF6Q9BYE7 350 aa18.4■□□□□ 0.54
CHKB-CPT1B-202ENST00000453634 CCDC180Q9P1Z9 1646 aa18.36■□□□□ 0.53
CHKB-CPT1B-202ENST00000453634 DCAF1Q9Y4B6 1507 aa18.33■□□□□ 0.53
CHKB-CPT1B-202ENST00000453634 PPARGC1BQ86YN6 1023 aaKnown RBP18.25■□□□□ 0.51
CHKB-CPT1B-202ENST00000453634 PELP1Q8IZL8 1130 aaKnown RBP18.06■□□□□ 0.48
CHKB-CPT1B-202ENST00000453634 TRIM26Q12899 539 aaPredicted RBP18.03■□□□□ 0.48
CHKB-CPT1B-202ENST00000453634 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
CHKB-CPT1B-202ENST00000453634 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
CHKB-CPT1B-202ENST00000453634 DCAF8L2P0C7V8 631 aa17.76■□□□□ 0.43
CHKB-CPT1B-202ENST00000453634 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
CHKB-CPT1B-202ENST00000453634 ABCC9O60706 1549 aa17.61■□□□□ 0.41
CHKB-CPT1B-202ENST00000453634 RSF1Q96T23 1441 aaPredicted RBP17.44■□□□□ 0.38
CHKB-CPT1B-202ENST00000453634 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
CHKB-CPT1B-202ENST00000453634 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
CHKB-CPT1B-202ENST00000453634 MYT1Q01538 1121 aa17.37■□□□□ 0.37
CHKB-CPT1B-202ENST00000453634 ACIN1Q9UKV3 1341 aaKnown RBP17.35■□□□□ 0.37
CHKB-CPT1B-202ENST00000453634 NEUROD1Q13562 356 aa17.23■□□□□ 0.35
CHKB-CPT1B-202ENST00000453634 FAM9AQ8IZU1 332 aaPredicted RBP17.22■□□□□ 0.35
CHKB-CPT1B-202ENST00000453634 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
CHKB-CPT1B-202ENST00000453634 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
CHKB-CPT1B-202ENST00000453634 CCER1Q8TC90 406 aaPredicted RBP17.12■□□□□ 0.33
CHKB-CPT1B-202ENST00000453634 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
CHKB-CPT1B-202ENST00000453634 DIEXFQ68CQ4 756 aaKnown RBP17.11■□□□□ 0.33
CHKB-CPT1B-202ENST00000453634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.1■□□□□ 0.33
CHKB-CPT1B-202ENST00000453634 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
CHKB-CPT1B-202ENST00000453634 EHMT2Q96KQ7 1210 aa16.99■□□□□ 0.31
CHKB-CPT1B-202ENST00000453634 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
CHKB-CPT1B-202ENST00000453634 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
CHKB-CPT1B-202ENST00000453634 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
CHKB-CPT1B-202ENST00000453634 WIZO95785 1651 aa16.89■□□□□ 0.29
CHKB-CPT1B-202ENST00000453634 BAZ1AQ9NRL2 1556 aaPredicted RBP16.88■□□□□ 0.29
CHKB-CPT1B-202ENST00000453634 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
CHKB-CPT1B-202ENST00000453634 NACADO15069 1562 aa16.84■□□□□ 0.29
CHKB-CPT1B-202ENST00000453634 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
CHKB-CPT1B-202ENST00000453634 TNIKQ9UKE5 1360 aa16.79■□□□□ 0.28
CHKB-CPT1B-202ENST00000453634 EEA1Q15075 1411 aa16.72■□□□□ 0.27
CHKB-CPT1B-202ENST00000453634 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.26
CHKB-CPT1B-202ENST00000453634 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
CHKB-CPT1B-202ENST00000453634 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
CHKB-CPT1B-202ENST00000453634 MIER1Q8N108 512 aa16.66■□□□□ 0.26
CHKB-CPT1B-202ENST00000453634 YTHDC1Q96MU7 727 aaKnown RBP16.63■□□□□ 0.25
CHKB-CPT1B-202ENST00000453634 SOGA1O94964 1423 aa16.61■□□□□ 0.25
CHKB-CPT1B-202ENST00000453634 CLSPNQ9HAW4 1339 aa16.6■□□□□ 0.25
CHKB-CPT1B-202ENST00000453634 TTBK1Q5TCY1 1321 aaPredicted RBP16.59■□□□□ 0.25
CHKB-CPT1B-202ENST00000453634 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
CHKB-CPT1B-202ENST00000453634 SMARCA2P51531 1590 aa16.58■□□□□ 0.24
CHKB-CPT1B-202ENST00000453634 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
CHKB-CPT1B-202ENST00000453634 UBTFP17480 764 aaKnown RBP16.51■□□□□ 0.23
CHKB-CPT1B-202ENST00000453634 SMARCA4P51532 1647 aa16.51■□□□□ 0.23
CHKB-CPT1B-202ENST00000453634 RUSC2Q8N2Y8 1516 aa16.49■□□□□ 0.23
CHKB-CPT1B-202ENST00000453634 KIF21BO75037 1637 aa16.46■□□□□ 0.23
CHKB-CPT1B-202ENST00000453634 CEP164Q9UPV0 1460 aa16.44■□□□□ 0.22
CHKB-CPT1B-202ENST00000453634 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
CHKB-CPT1B-202ENST00000453634 VPS8Q8N3P4 1428 aa16.41■□□□□ 0.22
CHKB-CPT1B-202ENST00000453634 SUPT16HQ9Y5B9 1047 aaKnown RBP16.39■□□□□ 0.21
CHKB-CPT1B-202ENST00000453634 CLIP1P30622 1438 aa16.38■□□□□ 0.21
CHKB-CPT1B-202ENST00000453634 BAZ1BQ9UIG0 1483 aaKnown RBP16.37■□□□□ 0.21
CHKB-CPT1B-202ENST00000453634 APLP2Q06481 763 aa16.29■□□□□ 0.2
CHKB-CPT1B-202ENST00000453634 DHX57Q6P158 1386 aaKnown RBP16.28■□□□□ 0.2
CHKB-CPT1B-202ENST00000453634 TSHZ2Q9NRE2 1034 aa16.27■□□□□ 0.19
CHKB-CPT1B-202ENST00000453634 SYNJ1O43426 1573 aa16.26■□□□□ 0.19
CHKB-CPT1B-202ENST00000453634 ANP32EQ9BTT0 268 aa16.26■□□□□ 0.19
CHKB-CPT1B-202ENST00000453634 PEG3Q9GZU2 1588 aa16.22■□□□□ 0.19
CHKB-CPT1B-202ENST00000453634 UNC13AQ9UPW8 1703 aa16.2■□□□□ 0.18
CHKB-CPT1B-202ENST00000453634 RAPGEF2Q9Y4G8 1499 aa16.2■□□□□ 0.18
CHKB-CPT1B-202ENST00000453634 CUX2O14529 1486 aa16.17■□□□□ 0.18
CHKB-CPT1B-202ENST00000453634 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
CHKB-CPT1B-202ENST00000453634 ERICH3Q5RHP9 1530 aa16.11■□□□□ 0.17
CHKB-CPT1B-202ENST00000453634 ARAP1Q96P48 1450 aa16.07■□□□□ 0.16
CHKB-CPT1B-202ENST00000453634 TOP2BQ02880 1626 aa16.06■□□□□ 0.16
CHKB-CPT1B-202ENST00000453634 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
CHKB-CPT1B-202ENST00000453634 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
CHKB-CPT1B-202ENST00000453634 KANK4Q5T7N3 995 aaPredicted RBP16.01■□□□□ 0.15
CHKB-CPT1B-202ENST00000453634 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
CHKB-CPT1B-202ENST00000453634 CCNB3Q8WWL7 1395 aa15.98■□□□□ 0.15
CHKB-CPT1B-202ENST00000453634 BICRAQ9NZM4 1560 aa15.97■□□□□ 0.15
CHKB-CPT1B-202ENST00000453634 KCNH8Q96L42 1107 aa15.95■□□□□ 0.14
CHKB-CPT1B-202ENST00000453634 MAPKBP1O60336 1514 aa15.95■□□□□ 0.14
CHKB-CPT1B-202ENST00000453634 RANGAP1P46060 587 aaPredicted RBP15.94■□□□□ 0.14
CHKB-CPT1B-202ENST00000453634 ATAD2BQ9ULI0 1458 aa15.94■□□□□ 0.14
CHKB-CPT1B-202ENST00000453634 FKBP8Q14318 412 aa15.94■□□□□ 0.14
CHKB-CPT1B-202ENST00000453634 RBM19Q9Y4C8 960 aaKnown RBP15.9■□□□□ 0.14
CHKB-CPT1B-202ENST00000453634 RAB3GAP2Q9H2M9 1393 aa15.89■□□□□ 0.14
CHKB-CPT1B-202ENST00000453634 MAP3K1Q13233 1512 aa15.88■□□□□ 0.13
CHKB-CPT1B-202ENST00000453634 BCANQ96GW7 911 aa15.88■□□□□ 0.13
CHKB-CPT1B-202ENST00000453634 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
CHKB-CPT1B-202ENST00000453634 CCER2I3L3R5 266 aa15.87■□□□□ 0.13
CHKB-CPT1B-202ENST00000453634 NEFLP07196 543 aa15.87■□□□□ 0.13
CHKB-CPT1B-202ENST00000453634 PPP1R15AO75807 674 aaPredicted RBP15.86■□□□□ 0.13
CHKB-CPT1B-202ENST00000453634 ARHGAP35Q9NRY4 1499 aa15.85■□□□□ 0.13
CHKB-CPT1B-202ENST00000453634 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
CHKB-CPT1B-202ENST00000453634 SETD5Q9C0A6 1442 aa15.84■□□□□ 0.13
CHKB-CPT1B-202ENST00000453634 DDX10Q13206 875 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms