RNA–Protein interactions for RNA: ENST00000529229.1

AP003390.2-201, humanhuman

TSL 4 BASIC

Gene AP003390.2, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003390.2-201ENST00000529229 NISCHQ9Y2I1 1504 aa27.59■■■□□ 2.01
AP003390.2-201ENST00000529229 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
AP003390.2-201ENST00000529229 ABCC9O60706 1549 aa23.88■■□□□ 1.41
AP003390.2-201ENST00000529229 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
AP003390.2-201ENST00000529229 NACADO15069 1562 aa23.01■■□□□ 1.27
AP003390.2-201ENST00000529229 RB1CC1Q8TDY2 1594 aa23.01■■□□□ 1.27
AP003390.2-201ENST00000529229 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
AP003390.2-201ENST00000529229 DCAF1Q9Y4B6 1507 aa22.86■■□□□ 1.25
AP003390.2-201ENST00000529229 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
AP003390.2-201ENST00000529229 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
AP003390.2-201ENST00000529229 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
AP003390.2-201ENST00000529229 SCRIBQ14160 1630 aa22.4■■□□□ 1.18
AP003390.2-201ENST00000529229 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
AP003390.2-201ENST00000529229 SHROOM4Q9ULL8 1493 aa22.11■■□□□ 1.13
AP003390.2-201ENST00000529229 DNAJC5BQ9UF47 199 aa21.87■■□□□ 1.09
AP003390.2-201ENST00000529229 EIF4G1Q04637 1599 aaKnown RBP21.79■■□□□ 1.08
AP003390.2-201ENST00000529229 CC2D2AQ9P2K1 1620 aa21.69■■□□□ 1.06
AP003390.2-201ENST00000529229 CECR2Q9BXF3 1484 aa21.51■■□□□ 1.03
AP003390.2-201ENST00000529229 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
AP003390.2-201ENST00000529229 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
AP003390.2-201ENST00000529229 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
AP003390.2-201ENST00000529229 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
AP003390.2-201ENST00000529229 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
AP003390.2-201ENST00000529229 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
AP003390.2-201ENST00000529229 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
AP003390.2-201ENST00000529229 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
AP003390.2-201ENST00000529229 WIZO95785 1651 aa21.1■□□□□ 0.97
AP003390.2-201ENST00000529229 BAZ1BQ9UIG0 1483 aaKnown RBP21.03■□□□□ 0.96
AP003390.2-201ENST00000529229 RSF1Q96T23 1441 aaPredicted RBP21.01■□□□□ 0.95
AP003390.2-201ENST00000529229 TOP2AP11388 1531 aaKnown RBP20.84■□□□□ 0.93
AP003390.2-201ENST00000529229 NESP48681 1621 aa20.75■□□□□ 0.91
AP003390.2-201ENST00000529229 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
AP003390.2-201ENST00000529229 KIF21AQ7Z4S6 1674 aa20.61■□□□□ 0.89
AP003390.2-201ENST00000529229 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
AP003390.2-201ENST00000529229 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
AP003390.2-201ENST00000529229 THOC2Q8NI27 1593 aaKnown RBP20.53■□□□□ 0.88
AP003390.2-201ENST00000529229 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.88
AP003390.2-201ENST00000529229 CFTRP13569 1480 aa20.5■□□□□ 0.87
AP003390.2-201ENST00000529229 ERCC6Q03468 1493 aa20.48■□□□□ 0.87
AP003390.2-201ENST00000529229 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
AP003390.2-201ENST00000529229 FANCD2Q9BXW9 1451 aa20.34■□□□□ 0.85
AP003390.2-201ENST00000529229 CUX2O14529 1486 aa20.33■□□□□ 0.85
AP003390.2-201ENST00000529229 WDR62O43379 1518 aa20.31■□□□□ 0.84
AP003390.2-201ENST00000529229 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
AP003390.2-201ENST00000529229 SUPT5HO00267 1087 aaKnown RBP20.29■□□□□ 0.84
AP003390.2-201ENST00000529229 MRC2Q9UBG0 1479 aa20.29■□□□□ 0.84
AP003390.2-201ENST00000529229 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
AP003390.2-201ENST00000529229 DNMBPQ6XZF7 1577 aa20.07■□□□□ 0.8
AP003390.2-201ENST00000529229 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
AP003390.2-201ENST00000529229 CUX1P39880 1505 aa19.98■□□□□ 0.79
AP003390.2-201ENST00000529229 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
AP003390.2-201ENST00000529229 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
AP003390.2-201ENST00000529229 POLA1P09884 1462 aaPredicted RBP19.91■□□□□ 0.78
AP003390.2-201ENST00000529229 WDR97A6NE52 1622 aa19.87■□□□□ 0.77
AP003390.2-201ENST00000529229 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
AP003390.2-201ENST00000529229 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
AP003390.2-201ENST00000529229 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
AP003390.2-201ENST00000529229 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
AP003390.2-201ENST00000529229 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
AP003390.2-201ENST00000529229 EIF4G3O43432 1585 aaKnown RBP19.85■□□□□ 0.77
AP003390.2-201ENST00000529229 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
AP003390.2-201ENST00000529229 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
AP003390.2-201ENST00000529229 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
AP003390.2-201ENST00000529229 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
AP003390.2-201ENST00000529229 SOGA1O94964 1423 aa19.69■□□□□ 0.74
AP003390.2-201ENST00000529229 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.74
AP003390.2-201ENST00000529229 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
AP003390.2-201ENST00000529229 PBRM1Q86U86 1689 aa19.66■□□□□ 0.74
AP003390.2-201ENST00000529229 CHD1O14646 1710 aa19.61■□□□□ 0.73
AP003390.2-201ENST00000529229 TDRD9Q8NDG6 1382 aaKnown RBP19.59■□□□□ 0.73
AP003390.2-201ENST00000529229 DNAJC5Q9H3Z4 198 aa19.54■□□□□ 0.72
AP003390.2-201ENST00000529229 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
AP003390.2-201ENST00000529229 GAPVD1Q14C86 1478 aa19.52■□□□□ 0.72
AP003390.2-201ENST00000529229 GRIN2BQ13224 1484 aa19.51■□□□□ 0.71
AP003390.2-201ENST00000529229 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
AP003390.2-201ENST00000529229 ADAMTS12P58397 1594 aa19.48■□□□□ 0.71
AP003390.2-201ENST00000529229 ERICH3Q5RHP9 1530 aa19.42■□□□□ 0.7
AP003390.2-201ENST00000529229 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
AP003390.2-201ENST00000529229 CLASP1Q7Z460 1538 aa19.38■□□□□ 0.69
AP003390.2-201ENST00000529229 GRIN2AQ12879 1464 aa19.31■□□□□ 0.68
AP003390.2-201ENST00000529229 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
AP003390.2-201ENST00000529229 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
AP003390.2-201ENST00000529229 CUL7Q14999 1698 aa19.3■□□□□ 0.68
AP003390.2-201ENST00000529229 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
AP003390.2-201ENST00000529229 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
AP003390.2-201ENST00000529229 RIMBP3CA6NJZ7 1639 aa19.28■□□□□ 0.68
AP003390.2-201ENST00000529229 RIMBP3BA6NNM3 1639 aa19.28■□□□□ 0.68
AP003390.2-201ENST00000529229 RIMBP3Q9UFD9 1639 aa19.28■□□□□ 0.68
AP003390.2-201ENST00000529229 RUSC2Q8N2Y8 1516 aa19.27■□□□□ 0.68
AP003390.2-201ENST00000529229 NUP160Q12769 1436 aa19.25■□□□□ 0.67
AP003390.2-201ENST00000529229 ARHGEF11O15085 1522 aa19.24■□□□□ 0.67
AP003390.2-201ENST00000529229 IGF1RP08069 1367 aa19.23■□□□□ 0.67
AP003390.2-201ENST00000529229 FBLN2P98095 1184 aa19.21■□□□□ 0.67
AP003390.2-201ENST00000529229 SHROOM2Q13796 1616 aa19.2■□□□□ 0.66
AP003390.2-201ENST00000529229 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
AP003390.2-201ENST00000529229 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
AP003390.2-201ENST00000529229 ERCC6L2Q5T890 1561 aa19.13■□□□□ 0.65
AP003390.2-201ENST00000529229 ARAP1Q96P48 1450 aa19.11■□□□□ 0.65
AP003390.2-201ENST00000529229 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
AP003390.2-201ENST00000529229 PRXQ9BXM0 1461 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms