RNA–Protein interactions for RNA: ENST00000618504.4

PDE4DIP-247, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2 BASIC

Gene PDE4DIP, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-247ENST00000618504 NISCHQ9Y2I1 1504 aa25.48■■□□□ 1.67
PDE4DIP-247ENST00000618504 CCDC180Q9P1Z9 1646 aa22.44■■□□□ 1.18
PDE4DIP-247ENST00000618504 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
PDE4DIP-247ENST00000618504 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
PDE4DIP-247ENST00000618504 ABCC9O60706 1549 aa21.09■□□□□ 0.97
PDE4DIP-247ENST00000618504 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
PDE4DIP-247ENST00000618504 NACADO15069 1562 aa20.87■□□□□ 0.93
PDE4DIP-247ENST00000618504 DCAF8L2P0C7V8 631 aa20.81■□□□□ 0.92
PDE4DIP-247ENST00000618504 RB1CC1Q8TDY2 1594 aa20.71■□□□□ 0.91
PDE4DIP-247ENST00000618504 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
PDE4DIP-247ENST00000618504 SCRIBQ14160 1630 aa20.42■□□□□ 0.86
PDE4DIP-247ENST00000618504 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.83
PDE4DIP-247ENST00000618504 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
PDE4DIP-247ENST00000618504 PABPN1Q86U42 306 aaKnown RBP eCLIP19.75■□□□□ 0.75
PDE4DIP-247ENST00000618504 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
PDE4DIP-247ENST00000618504 CECR2Q9BXF3 1484 aa19.71■□□□□ 0.75
PDE4DIP-247ENST00000618504 RSF1Q96T23 1441 aaPredicted RBP19.65■□□□□ 0.74
PDE4DIP-247ENST00000618504 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
PDE4DIP-247ENST00000618504 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
PDE4DIP-247ENST00000618504 SUPT5HO00267 1087 aaKnown RBP19.58■□□□□ 0.72
PDE4DIP-247ENST00000618504 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
PDE4DIP-247ENST00000618504 WIZO95785 1651 aa19.46■□□□□ 0.71
PDE4DIP-247ENST00000618504 EIF4G1Q04637 1599 aaKnown RBP19.44■□□□□ 0.7
PDE4DIP-247ENST00000618504 SMARCA2P51531 1590 aa19.38■□□□□ 0.69
PDE4DIP-247ENST00000618504 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
PDE4DIP-247ENST00000618504 ATAD2BQ9ULI0 1458 aa19.32■□□□□ 0.68
PDE4DIP-247ENST00000618504 HMGXB3Q12766 1538 aa19.25■□□□□ 0.67
PDE4DIP-247ENST00000618504 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
PDE4DIP-247ENST00000618504 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
PDE4DIP-247ENST00000618504 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
PDE4DIP-247ENST00000618504 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
PDE4DIP-247ENST00000618504 PRDM2Q13029 1718 aa18.77■□□□□ 0.59
PDE4DIP-247ENST00000618504 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
PDE4DIP-247ENST00000618504 CFTRP13569 1480 aa18.73■□□□□ 0.59
PDE4DIP-247ENST00000618504 CADPSQ9ULU8 1353 aa18.67■□□□□ 0.58
PDE4DIP-247ENST00000618504 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
PDE4DIP-247ENST00000618504 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
PDE4DIP-247ENST00000618504 ABCC8Q09428 1581 aa18.57■□□□□ 0.56
PDE4DIP-247ENST00000618504 WRNQ14191 1432 aaPredicted RBP eCLIP18.53■□□□□ 0.56
PDE4DIP-247ENST00000618504 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
PDE4DIP-247ENST00000618504 BIVM-ERCC5R4GMW8 1640 aa18.48■□□□□ 0.55
PDE4DIP-247ENST00000618504 NESP48681 1621 aa18.46■□□□□ 0.55
PDE4DIP-247ENST00000618504 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
PDE4DIP-247ENST00000618504 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.54
PDE4DIP-247ENST00000618504 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
PDE4DIP-247ENST00000618504 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
PDE4DIP-247ENST00000618504 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
PDE4DIP-247ENST00000618504 CUX1P39880 1505 aa18.38■□□□□ 0.53
PDE4DIP-247ENST00000618504 KIF21AQ7Z4S6 1674 aa18.35■□□□□ 0.53
PDE4DIP-247ENST00000618504 DNMBPQ6XZF7 1577 aa18.34■□□□□ 0.53
PDE4DIP-247ENST00000618504 EEA1Q15075 1411 aa18.28■□□□□ 0.52
PDE4DIP-247ENST00000618504 TOPBP1Q92547 1522 aa18.25■□□□□ 0.51
PDE4DIP-247ENST00000618504 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
PDE4DIP-247ENST00000618504 MRC2Q9UBG0 1479 aa18.21■□□□□ 0.51
PDE4DIP-247ENST00000618504 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
PDE4DIP-247ENST00000618504 WDR62O43379 1518 aa18.16■□□□□ 0.5
PDE4DIP-247ENST00000618504 SOGA1O94964 1423 aa18.15■□□□□ 0.5
PDE4DIP-247ENST00000618504 ERCC6Q03468 1493 aa18.15■□□□□ 0.5
PDE4DIP-247ENST00000618504 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.5
PDE4DIP-247ENST00000618504 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
PDE4DIP-247ENST00000618504 WDR97A6NE52 1622 aa18.11■□□□□ 0.49
PDE4DIP-247ENST00000618504 ABCA10Q8WWZ4 1543 aa18.09■□□□□ 0.49
PDE4DIP-247ENST00000618504 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
PDE4DIP-247ENST00000618504 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.48
PDE4DIP-247ENST00000618504 KIF21BO75037 1637 aa18.05■□□□□ 0.48
PDE4DIP-247ENST00000618504 FAM9AQ8IZU1 332 aaPredicted RBP18.04■□□□□ 0.48
PDE4DIP-247ENST00000618504 CUX2O14529 1486 aa18.03■□□□□ 0.48
PDE4DIP-247ENST00000618504 CSRNP3Q8WYN3 585 aa18.03■□□□□ 0.48
PDE4DIP-247ENST00000618504 TARBP1Q13395 1621 aaKnown RBP18.02■□□□□ 0.48
PDE4DIP-247ENST00000618504 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
PDE4DIP-247ENST00000618504 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
PDE4DIP-247ENST00000618504 IFT140Q96RY7 1462 aa17.98■□□□□ 0.47
PDE4DIP-247ENST00000618504 ERICH3Q5RHP9 1530 aa17.96■□□□□ 0.47
PDE4DIP-247ENST00000618504 GOLGA3Q08378 1498 aa17.95■□□□□ 0.46
PDE4DIP-247ENST00000618504 PRXQ9BXM0 1461 aa17.94■□□□□ 0.46
PDE4DIP-247ENST00000618504 CUL7Q14999 1698 aa17.92■□□□□ 0.46
PDE4DIP-247ENST00000618504 LOC105371045A0A1W2PR82 267 aa17.91■□□□□ 0.46
PDE4DIP-247ENST00000618504 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
PDE4DIP-247ENST00000618504 IGF1RP08069 1367 aa17.88■□□□□ 0.45
PDE4DIP-247ENST00000618504 PBRM1Q86U86 1689 aa17.87■□□□□ 0.45
PDE4DIP-247ENST00000618504 TNIKQ9UKE5 1360 aa17.85■□□□□ 0.45
PDE4DIP-247ENST00000618504 RAPGEF2Q9Y4G8 1499 aa17.83■□□□□ 0.45
PDE4DIP-247ENST00000618504 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
PDE4DIP-247ENST00000618504 TDRD9Q8NDG6 1382 aaKnown RBP17.81■□□□□ 0.44
PDE4DIP-247ENST00000618504 EIF4G3O43432 1585 aaKnown RBP17.81■□□□□ 0.44
PDE4DIP-247ENST00000618504 GRIN2BQ13224 1484 aa17.79■□□□□ 0.44
PDE4DIP-247ENST00000618504 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.43
PDE4DIP-247ENST00000618504 ADAMTS12P58397 1594 aa17.75■□□□□ 0.43
PDE4DIP-247ENST00000618504 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.43
PDE4DIP-247ENST00000618504 UBTFP17480 764 aaKnown RBP17.73■□□□□ 0.43
PDE4DIP-247ENST00000618504 FHAD1B1AJZ9 1412 aa17.72■□□□□ 0.43
PDE4DIP-247ENST00000618504 CEP162Q5TB80 1403 aa17.71■□□□□ 0.43
PDE4DIP-247ENST00000618504 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
PDE4DIP-247ENST00000618504 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
PDE4DIP-247ENST00000618504 CTTNBP2Q8WZ74 1663 aa17.68■□□□□ 0.42
PDE4DIP-247ENST00000618504 SNAPC4Q5SXM2 1469 aa17.65■□□□□ 0.42
PDE4DIP-247ENST00000618504 CLIP1P30622 1438 aa17.61■□□□□ 0.41
PDE4DIP-247ENST00000618504 SYNJ2O15056 1496 aa17.6■□□□□ 0.41
PDE4DIP-247ENST00000618504 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
PDE4DIP-247ENST00000618504 EFCAB5A4FU69 1503 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms