RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 NISCHQ9Y2I1 1504 aa21.2■□□□□ 0.98
PCDHGA11-203ENST00000622044 SHROOM4Q9ULL8 1493 aa19.57■□□□□ 0.72
PCDHGA11-203ENST00000622044 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
PCDHGA11-203ENST00000622044 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
PCDHGA11-203ENST00000622044 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
PCDHGA11-203ENST00000622044 HRCP23327 699 aa18.7■□□□□ 0.58
PCDHGA11-203ENST00000622044 PPARGC1BQ86YN6 1023 aaKnown RBP18.65■□□□□ 0.58
PCDHGA11-203ENST00000622044 CHIC1Q5VXU3 224 aa18.51■□□□□ 0.55
PCDHGA11-203ENST00000622044 EHMT2Q96KQ7 1210 aa18.46■□□□□ 0.55
PCDHGA11-203ENST00000622044 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
PCDHGA11-203ENST00000622044 MYO15BQ96JP2 1530 aa18.24■□□□□ 0.51
PCDHGA11-203ENST00000622044 FAM9AQ8IZU1 332 aaPredicted RBP18.23■□□□□ 0.51
PCDHGA11-203ENST00000622044 TRIM26Q12899 539 aaPredicted RBP18.05■□□□□ 0.48
PCDHGA11-203ENST00000622044 TTBK1Q5TCY1 1321 aaPredicted RBP17.91■□□□□ 0.46
PCDHGA11-203ENST00000622044 TRIM41Q8WV44 630 aa17.9■□□□□ 0.46
PCDHGA11-203ENST00000622044 ABCC9O60706 1549 aa17.84■□□□□ 0.45
PCDHGA11-203ENST00000622044 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.45
PCDHGA11-203ENST00000622044 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
PCDHGA11-203ENST00000622044 CCDC180Q9P1Z9 1646 aa17.76■□□□□ 0.43
PCDHGA11-203ENST00000622044 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
PCDHGA11-203ENST00000622044 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.42
PCDHGA11-203ENST00000622044 DCAF1Q9Y4B6 1507 aa17.69■□□□□ 0.42
PCDHGA11-203ENST00000622044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.61■□□□□ 0.41
PCDHGA11-203ENST00000622044 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
PCDHGA11-203ENST00000622044 YTHDC1Q96MU7 727 aaKnown RBP17.51■□□□□ 0.39
PCDHGA11-203ENST00000622044 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
PCDHGA11-203ENST00000622044 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
PCDHGA11-203ENST00000622044 DIEXFQ68CQ4 756 aaKnown RBP17.36■□□□□ 0.37
PCDHGA11-203ENST00000622044 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
PCDHGA11-203ENST00000622044 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
PCDHGA11-203ENST00000622044 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
PCDHGA11-203ENST00000622044 PABPN1Q86U42 306 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCDHGA11-203ENST00000622044 RANGAP1P46060 587 aaPredicted RBP17.27■□□□□ 0.35
PCDHGA11-203ENST00000622044 UBTFP17480 764 aaKnown RBP17.23■□□□□ 0.35
PCDHGA11-203ENST00000622044 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
PCDHGA11-203ENST00000622044 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
PCDHGA11-203ENST00000622044 APLP2Q06481 763 aa17.05■□□□□ 0.32
PCDHGA11-203ENST00000622044 ZNF316A6NFI3 1004 aaPredicted RBP16.96■□□□□ 0.31
PCDHGA11-203ENST00000622044 MYT1Q01538 1121 aa16.95■□□□□ 0.3
PCDHGA11-203ENST00000622044 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
PCDHGA11-203ENST00000622044 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
PCDHGA11-203ENST00000622044 MIER1Q8N108 512 aa16.85■□□□□ 0.29
PCDHGA11-203ENST00000622044 NACADO15069 1562 aa16.78■□□□□ 0.28
PCDHGA11-203ENST00000622044 ITGAEP38570 1179 aa16.76■□□□□ 0.27
PCDHGA11-203ENST00000622044 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
PCDHGA11-203ENST00000622044 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
PCDHGA11-203ENST00000622044 BCANQ96GW7 911 aa16.67■□□□□ 0.26
PCDHGA11-203ENST00000622044 MROH2BQ7Z745 1585 aa16.63■□□□□ 0.25
PCDHGA11-203ENST00000622044 SOGA1O94964 1423 aa16.57■□□□□ 0.24
PCDHGA11-203ENST00000622044 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
PCDHGA11-203ENST00000622044 ATP1B4Q9UN42 357 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA11-203ENST00000622044 CCDC88BA6NC98 1476 aa16.53■□□□□ 0.24
PCDHGA11-203ENST00000622044 WIZO95785 1651 aa16.51■□□□□ 0.23
PCDHGA11-203ENST00000622044 TNIKQ9UKE5 1360 aa16.46■□□□□ 0.23
PCDHGA11-203ENST00000622044 NEFLP07196 543 aa16.46■□□□□ 0.23
PCDHGA11-203ENST00000622044 RUSC2Q8N2Y8 1516 aa16.39■□□□□ 0.21
PCDHGA11-203ENST00000622044 SUPT16HQ9Y5B9 1047 aaKnown RBP16.39■□□□□ 0.21
PCDHGA11-203ENST00000622044 CLIP1P30622 1438 aa16.39■□□□□ 0.21
PCDHGA11-203ENST00000622044 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
PCDHGA11-203ENST00000622044 FKBP8Q14318 412 aa16.34■□□□□ 0.21
PCDHGA11-203ENST00000622044 ERICH6Q7L0X2 663 aa16.33■□□□□ 0.2
PCDHGA11-203ENST00000622044 WRNQ14191 1432 aaPredicted RBP eCLIP16.32■□□□□ 0.2
PCDHGA11-203ENST00000622044 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
PCDHGA11-203ENST00000622044 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
PCDHGA11-203ENST00000622044 DDX10Q13206 875 aaKnown RBP16.3■□□□□ 0.2
PCDHGA11-203ENST00000622044 FAM50AQ14320 339 aaKnown RBP16.29■□□□□ 0.2
PCDHGA11-203ENST00000622044 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
PCDHGA11-203ENST00000622044 KCNH8Q96L42 1107 aa16.24■□□□□ 0.19
PCDHGA11-203ENST00000622044 EEA1Q15075 1411 aa16.24■□□□□ 0.19
PCDHGA11-203ENST00000622044 CNGB1Q14028 1251 aaPredicted RBP16.2■□□□□ 0.18
PCDHGA11-203ENST00000622044 TSHZ2Q9NRE2 1034 aa16.2■□□□□ 0.18
PCDHGA11-203ENST00000622044 ANP32EQ9BTT0 268 aa16.18■□□□□ 0.18
PCDHGA11-203ENST00000622044 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
PCDHGA11-203ENST00000622044 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
PCDHGA11-203ENST00000622044 SMARCA4P51532 1647 aa16.17■□□□□ 0.18
PCDHGA11-203ENST00000622044 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
PCDHGA11-203ENST00000622044 P3H3Q8IVL6 736 aa16.17■□□□□ 0.18
PCDHGA11-203ENST00000622044 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
PCDHGA11-203ENST00000622044 CLSPNQ9HAW4 1339 aa16.16■□□□□ 0.18
PCDHGA11-203ENST00000622044 VPS8Q8N3P4 1428 aa16.14■□□□□ 0.17
PCDHGA11-203ENST00000622044 ANP32CO43423 234 aa16.13■□□□□ 0.17
PCDHGA11-203ENST00000622044 IRX6P78412 446 aaPredicted RBP16.12■□□□□ 0.17
PCDHGA11-203ENST00000622044 BAZ1BQ9UIG0 1483 aaKnown RBP16.12■□□□□ 0.17
PCDHGA11-203ENST00000622044 SIN3AQ96ST3 1273 aa16.09■□□□□ 0.17
PCDHGA11-203ENST00000622044 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
PCDHGA11-203ENST00000622044 DHX57Q6P158 1386 aaKnown RBP16.07■□□□□ 0.16
PCDHGA11-203ENST00000622044 RAPGEF2Q9Y4G8 1499 aa16.06■□□□□ 0.16
PCDHGA11-203ENST00000622044 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
PCDHGA11-203ENST00000622044 SMARCA2P51531 1590 aa16.02■□□□□ 0.16
PCDHGA11-203ENST00000622044 BCL11AQ9H165 835 aa16.02■□□□□ 0.15
PCDHGA11-203ENST00000622044 HNRNPUQ00839 825 aaKnown RBP eCLIP16■□□□□ 0.15
PCDHGA11-203ENST00000622044 POLR3GLQ9BT43 218 aa16■□□□□ 0.15
PCDHGA11-203ENST00000622044 CDK11AQ9UQ88 783 aaPredicted RBP15.97■□□□□ 0.15
PCDHGA11-203ENST00000622044 RBM19Q9Y4C8 960 aaKnown RBP15.96■□□□□ 0.15
PCDHGA11-203ENST00000622044 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
PCDHGA11-203ENST00000622044 CCNB3Q8WWL7 1395 aa15.95■□□□□ 0.14
PCDHGA11-203ENST00000622044 RAB3GAP2Q9H2M9 1393 aa15.9■□□□□ 0.14
PCDHGA11-203ENST00000622044 TONSLQ96HA7 1378 aa15.88■□□□□ 0.13
PCDHGA11-203ENST00000622044 SENP3-EIF4A1A0A087X0R7 540 aa15.87■□□□□ 0.13
PCDHGA11-203ENST00000622044 FAM9BQ8IZU0 186 aa15.86■□□□□ 0.13
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