RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
SKA2-206ENST00000581068 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
SKA2-206ENST00000581068 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
SKA2-206ENST00000581068 ZCCHC6Q5VYS8 1495 aaKnown RBP21.27■■□□□ 1
SKA2-206ENST00000581068 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
SKA2-206ENST00000581068 ABCC9O60706 1549 aa21.19■□□□□ 0.98
SKA2-206ENST00000581068 DCAF8L2P0C7V8 631 aa21.05■□□□□ 0.96
SKA2-206ENST00000581068 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
SKA2-206ENST00000581068 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
SKA2-206ENST00000581068 NACADO15069 1562 aa20.79■□□□□ 0.92
SKA2-206ENST00000581068 RB1CC1Q8TDY2 1594 aa20.65■□□□□ 0.9
SKA2-206ENST00000581068 SHROOM4Q9ULL8 1493 aa20.52■□□□□ 0.88
SKA2-206ENST00000581068 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
SKA2-206ENST00000581068 UNC13AQ9UPW8 1703 aa20.14■□□□□ 0.81
SKA2-206ENST00000581068 BICRAQ9NZM4 1560 aa19.99■□□□□ 0.79
SKA2-206ENST00000581068 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
SKA2-206ENST00000581068 CECR2Q9BXF3 1484 aa19.72■□□□□ 0.75
SKA2-206ENST00000581068 SUPT5HO00267 1087 aaKnown RBP19.68■□□□□ 0.74
SKA2-206ENST00000581068 BAZ1AQ9NRL2 1556 aaPredicted RBP19.63■□□□□ 0.73
SKA2-206ENST00000581068 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
SKA2-206ENST00000581068 MROH2BQ7Z745 1585 aa19.59■□□□□ 0.73
SKA2-206ENST00000581068 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
SKA2-206ENST00000581068 EIF4G1Q04637 1599 aaKnown RBP19.41■□□□□ 0.7
SKA2-206ENST00000581068 WIZO95785 1651 aa19.4■□□□□ 0.7
SKA2-206ENST00000581068 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.69
SKA2-206ENST00000581068 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
SKA2-206ENST00000581068 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
SKA2-206ENST00000581068 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
SKA2-206ENST00000581068 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
SKA2-206ENST00000581068 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
SKA2-206ENST00000581068 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
SKA2-206ENST00000581068 CC2D2AQ9P2K1 1620 aa19.17■□□□□ 0.66
SKA2-206ENST00000581068 HMGXB3Q12766 1538 aa19.13■□□□□ 0.65
SKA2-206ENST00000581068 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
SKA2-206ENST00000581068 PHF23Q9BUL5 403 aaPredicted RBP18.95■□□□□ 0.62
SKA2-206ENST00000581068 DNAJC5BQ9UF47 199 aa18.87■□□□□ 0.61
SKA2-206ENST00000581068 CFTRP13569 1480 aa18.69■□□□□ 0.58
SKA2-206ENST00000581068 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
SKA2-206ENST00000581068 LAMC3Q9Y6N6 1575 aa18.56■□□□□ 0.56
SKA2-206ENST00000581068 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
SKA2-206ENST00000581068 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
SKA2-206ENST00000581068 NESP48681 1621 aa18.52■□□□□ 0.56
SKA2-206ENST00000581068 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
SKA2-206ENST00000581068 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
SKA2-206ENST00000581068 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.54
SKA2-206ENST00000581068 PDS5BQ9NTI5 1447 aa18.45■□□□□ 0.54
SKA2-206ENST00000581068 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
SKA2-206ENST00000581068 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
SKA2-206ENST00000581068 TOP2BQ02880 1626 aa18.34■□□□□ 0.53
SKA2-206ENST00000581068 CUX1P39880 1505 aa18.33■□□□□ 0.53
SKA2-206ENST00000581068 BIVM-ERCC5R4GMW8 1640 aa18.32■□□□□ 0.52
SKA2-206ENST00000581068 KIF21AQ7Z4S6 1674 aa18.29■□□□□ 0.52
SKA2-206ENST00000581068 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
SKA2-206ENST00000581068 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
SKA2-206ENST00000581068 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
SKA2-206ENST00000581068 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
SKA2-206ENST00000581068 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
SKA2-206ENST00000581068 FAM9AQ8IZU1 332 aaPredicted RBP18.17■□□□□ 0.5
SKA2-206ENST00000581068 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
SKA2-206ENST00000581068 SOGA1O94964 1423 aa18.15■□□□□ 0.5
SKA2-206ENST00000581068 EEA1Q15075 1411 aa18.15■□□□□ 0.5
SKA2-206ENST00000581068 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
SKA2-206ENST00000581068 WDR62O43379 1518 aa18.09■□□□□ 0.49
SKA2-206ENST00000581068 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.49
SKA2-206ENST00000581068 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
SKA2-206ENST00000581068 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
SKA2-206ENST00000581068 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
SKA2-206ENST00000581068 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
SKA2-206ENST00000581068 CUX2O14529 1486 aa18.03■□□□□ 0.48
SKA2-206ENST00000581068 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
SKA2-206ENST00000581068 LOC105371045A0A1W2PR82 267 aa18■□□□□ 0.47
SKA2-206ENST00000581068 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
SKA2-206ENST00000581068 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.47
SKA2-206ENST00000581068 WDR97A6NE52 1622 aa17.94■□□□□ 0.46
SKA2-206ENST00000581068 FOXD1Q16676 465 aa17.93■□□□□ 0.46
SKA2-206ENST00000581068 IGF1RP08069 1367 aa17.91■□□□□ 0.46
SKA2-206ENST00000581068 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
SKA2-206ENST00000581068 EHMT2Q96KQ7 1210 aa17.88■□□□□ 0.45
SKA2-206ENST00000581068 KIF21BO75037 1637 aa17.87■□□□□ 0.45
SKA2-206ENST00000581068 GAPVD1Q14C86 1478 aa17.87■□□□□ 0.45
SKA2-206ENST00000581068 ABCA5Q8WWZ7 1642 aa17.87■□□□□ 0.45
SKA2-206ENST00000581068 GOLGA3Q08378 1498 aa17.86■□□□□ 0.45
SKA2-206ENST00000581068 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
SKA2-206ENST00000581068 CARMIL1Q5VZK9 1371 aa17.82■□□□□ 0.44
SKA2-206ENST00000581068 ERICH3Q5RHP9 1530 aa17.82■□□□□ 0.44
SKA2-206ENST00000581068 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.44
SKA2-206ENST00000581068 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
SKA2-206ENST00000581068 UBTFP17480 764 aaKnown RBP17.8■□□□□ 0.44
SKA2-206ENST00000581068 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
SKA2-206ENST00000581068 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
SKA2-206ENST00000581068 GRIN2BQ13224 1484 aa17.78■□□□□ 0.44
SKA2-206ENST00000581068 CUL7Q14999 1698 aa17.77■□□□□ 0.44
SKA2-206ENST00000581068 EIF4G3O43432 1585 aaKnown RBP17.74■□□□□ 0.43
SKA2-206ENST00000581068 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
SKA2-206ENST00000581068 FHAD1B1AJZ9 1412 aa17.7■□□□□ 0.42
SKA2-206ENST00000581068 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
SKA2-206ENST00000581068 SNAPC4Q5SXM2 1469 aa17.65■□□□□ 0.42
SKA2-206ENST00000581068 MAGI1Q96QZ7 1491 aaPredicted RBP17.64■□□□□ 0.41
SKA2-206ENST00000581068 CEP162Q5TB80 1403 aa17.63■□□□□ 0.41
SKA2-206ENST00000581068 SYNJ2O15056 1496 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms