RNA–Protein interactions for RNA: ENST00000547179.1

LINC00485-201, long intergenic non-protein coding RNA 485, humanhuman

TSL 1 (best) BASIC

Gene LINC00485, Length 3,722 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00485-201ENST00000547179 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.61
LINC00485-201ENST00000547179 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
LINC00485-201ENST00000547179 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
LINC00485-201ENST00000547179 DCAF8L2P0C7V8 631 aa20.99■□□□□ 0.95
LINC00485-201ENST00000547179 ABCC9O60706 1549 aa20.89■□□□□ 0.94
LINC00485-201ENST00000547179 DCAF1Q9Y4B6 1507 aa20.77■□□□□ 0.92
LINC00485-201ENST00000547179 MYO15BQ96JP2 1530 aa20.6■□□□□ 0.89
LINC00485-201ENST00000547179 NACADO15069 1562 aa20.54■□□□□ 0.88
LINC00485-201ENST00000547179 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
LINC00485-201ENST00000547179 SHROOM4Q9ULL8 1493 aa20.41■□□□□ 0.86
LINC00485-201ENST00000547179 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
LINC00485-201ENST00000547179 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
LINC00485-201ENST00000547179 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
LINC00485-201ENST00000547179 SUPT5HO00267 1087 aaKnown RBP19.67■□□□□ 0.74
LINC00485-201ENST00000547179 BICRAQ9NZM4 1560 aa19.58■□□□□ 0.72
LINC00485-201ENST00000547179 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
LINC00485-201ENST00000547179 CECR2Q9BXF3 1484 aa19.42■□□□□ 0.7
LINC00485-201ENST00000547179 RSF1Q96T23 1441 aaPredicted RBP19.4■□□□□ 0.7
LINC00485-201ENST00000547179 MROH2BQ7Z745 1585 aa19.31■□□□□ 0.68
LINC00485-201ENST00000547179 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
LINC00485-201ENST00000547179 WIZO95785 1651 aa19.12■□□□□ 0.65
LINC00485-201ENST00000547179 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
LINC00485-201ENST00000547179 EIF4G1Q04637 1599 aaKnown RBP19.11■□□□□ 0.65
LINC00485-201ENST00000547179 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
LINC00485-201ENST00000547179 PEG3Q9GZU2 1588 aa19.04■□□□□ 0.64
LINC00485-201ENST00000547179 TOP2AP11388 1531 aaKnown RBP19.02■□□□□ 0.64
LINC00485-201ENST00000547179 BAZ1BQ9UIG0 1483 aaKnown RBP19.01■□□□□ 0.63
LINC00485-201ENST00000547179 NCAPD3P42695 1498 aa18.93■□□□□ 0.62
LINC00485-201ENST00000547179 HMGXB3Q12766 1538 aa18.88■□□□□ 0.61
LINC00485-201ENST00000547179 CC2D2AQ9P2K1 1620 aa18.85■□□□□ 0.61
LINC00485-201ENST00000547179 CCDC88BA6NC98 1476 aa18.8■□□□□ 0.6
LINC00485-201ENST00000547179 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
LINC00485-201ENST00000547179 TRIM41Q8WV44 630 aa18.58■□□□□ 0.56
LINC00485-201ENST00000547179 CADPSQ9ULU8 1353 aa18.48■□□□□ 0.55
LINC00485-201ENST00000547179 CFTRP13569 1480 aa18.45■□□□□ 0.54
LINC00485-201ENST00000547179 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
LINC00485-201ENST00000547179 WRNQ14191 1432 aaPredicted RBP eCLIP18.36■□□□□ 0.53
LINC00485-201ENST00000547179 LAMC3Q9Y6N6 1575 aa18.32■□□□□ 0.52
LINC00485-201ENST00000547179 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
LINC00485-201ENST00000547179 PDS5BQ9NTI5 1447 aa18.3■□□□□ 0.52
LINC00485-201ENST00000547179 PRDM2Q13029 1718 aa18.28■□□□□ 0.52
LINC00485-201ENST00000547179 FANCD2Q9BXW9 1451 aa18.25■□□□□ 0.51
LINC00485-201ENST00000547179 NESP48681 1621 aa18.21■□□□□ 0.51
LINC00485-201ENST00000547179 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
LINC00485-201ENST00000547179 FAM9AQ8IZU1 332 aaPredicted RBP18.17■□□□□ 0.5
LINC00485-201ENST00000547179 EEA1Q15075 1411 aa18.13■□□□□ 0.49
LINC00485-201ENST00000547179 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
LINC00485-201ENST00000547179 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
LINC00485-201ENST00000547179 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
LINC00485-201ENST00000547179 CUX1P39880 1505 aa18.07■□□□□ 0.48
LINC00485-201ENST00000547179 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
LINC00485-201ENST00000547179 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
LINC00485-201ENST00000547179 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
LINC00485-201ENST00000547179 TOPBP1Q92547 1522 aa18■□□□□ 0.47
LINC00485-201ENST00000547179 MRC2Q9UBG0 1479 aa17.99■□□□□ 0.47
LINC00485-201ENST00000547179 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
LINC00485-201ENST00000547179 FGD5Q6ZNL6 1462 aa17.97■□□□□ 0.47
LINC00485-201ENST00000547179 SOGA1O94964 1423 aa17.97■□□□□ 0.47
LINC00485-201ENST00000547179 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
LINC00485-201ENST00000547179 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
LINC00485-201ENST00000547179 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
LINC00485-201ENST00000547179 CUX2O14529 1486 aa17.89■□□□□ 0.46
LINC00485-201ENST00000547179 POLA1P09884 1462 aaPredicted RBP17.89■□□□□ 0.45
LINC00485-201ENST00000547179 EHMT2Q96KQ7 1210 aa17.88■□□□□ 0.45
LINC00485-201ENST00000547179 UBTFP17480 764 aaKnown RBP17.86■□□□□ 0.45
LINC00485-201ENST00000547179 RUSC2Q8N2Y8 1516 aa17.84■□□□□ 0.45
LINC00485-201ENST00000547179 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
LINC00485-201ENST00000547179 GOLGA3Q08378 1498 aa17.81■□□□□ 0.44
LINC00485-201ENST00000547179 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
LINC00485-201ENST00000547179 WDR62O43379 1518 aa17.81■□□□□ 0.44
LINC00485-201ENST00000547179 IFT140Q96RY7 1462 aa17.77■□□□□ 0.44
LINC00485-201ENST00000547179 KIF21BO75037 1637 aa17.74■□□□□ 0.43
LINC00485-201ENST00000547179 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
LINC00485-201ENST00000547179 TNIKQ9UKE5 1360 aa17.72■□□□□ 0.43
LINC00485-201ENST00000547179 THOC2Q8NI27 1593 aaKnown RBP17.71■□□□□ 0.43
LINC00485-201ENST00000547179 IGF1RP08069 1367 aa17.71■□□□□ 0.43
LINC00485-201ENST00000547179 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
LINC00485-201ENST00000547179 CARMIL1Q5VZK9 1371 aa17.7■□□□□ 0.42
LINC00485-201ENST00000547179 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
LINC00485-201ENST00000547179 PRXQ9BXM0 1461 aa17.67■□□□□ 0.42
LINC00485-201ENST00000547179 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
LINC00485-201ENST00000547179 WDR97A6NE52 1622 aa17.65■□□□□ 0.42
LINC00485-201ENST00000547179 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
LINC00485-201ENST00000547179 CUL7Q14999 1698 aa17.62■□□□□ 0.41
LINC00485-201ENST00000547179 GRIN2BQ13224 1484 aa17.61■□□□□ 0.41
LINC00485-201ENST00000547179 ABCA5Q8WWZ7 1642 aa17.6■□□□□ 0.41
LINC00485-201ENST00000547179 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.41
LINC00485-201ENST00000547179 CEP162Q5TB80 1403 aa17.57■□□□□ 0.4
LINC00485-201ENST00000547179 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
LINC00485-201ENST00000547179 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.4
LINC00485-201ENST00000547179 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.4
LINC00485-201ENST00000547179 CLIP1P30622 1438 aa17.52■□□□□ 0.4
LINC00485-201ENST00000547179 PBRM1Q86U86 1689 aa17.49■□□□□ 0.39
LINC00485-201ENST00000547179 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
LINC00485-201ENST00000547179 EIF4G3O43432 1585 aaKnown RBP17.48■□□□□ 0.39
LINC00485-201ENST00000547179 MAGI1Q96QZ7 1491 aaPredicted RBP17.47■□□□□ 0.39
LINC00485-201ENST00000547179 APLP2Q06481 763 aa17.45■□□□□ 0.38
LINC00485-201ENST00000547179 FBLN2P98095 1184 aa17.45■□□□□ 0.38
LINC00485-201ENST00000547179 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
LINC00485-201ENST00000547179 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms