RNA–Protein interactions for RNA: ENST00000622592.1

AP003900.1-201, humanhuman

TSL 3 BASIC

Gene AP003900.1, Length 859 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-201ENST00000622592 NISCHQ9Y2I1 1504 aa31.45■■■□□ 2.63
AP003900.1-201ENST00000622592 ABCC9O60706 1549 aa29.74■■■□□ 2.35
AP003900.1-201ENST00000622592 AEBP2Q6ZN18 517 aaPredicted RBP29■■■□□ 2.23
AP003900.1-201ENST00000622592 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
AP003900.1-201ENST00000622592 CCDC180Q9P1Z9 1646 aa28.41■■■□□ 2.14
AP003900.1-201ENST00000622592 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
AP003900.1-201ENST00000622592 PABPN1Q86U42 306 aaKnown RBP eCLIP27.7■■■□□ 2.02
AP003900.1-201ENST00000622592 RB1CC1Q8TDY2 1594 aa27.64■■■□□ 2.01
AP003900.1-201ENST00000622592 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
AP003900.1-201ENST00000622592 NACADO15069 1562 aa27.21■■□□□ 1.95
AP003900.1-201ENST00000622592 DNAJC5Q9H3Z4 198 aa27.17■■□□□ 1.94
AP003900.1-201ENST00000622592 BICRAQ9NZM4 1560 aa26.99■■□□□ 1.91
AP003900.1-201ENST00000622592 UNC13AQ9UPW8 1703 aa26.99■■□□□ 1.91
AP003900.1-201ENST00000622592 CECR2Q9BXF3 1484 aa26.83■■□□□ 1.89
AP003900.1-201ENST00000622592 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
AP003900.1-201ENST00000622592 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
AP003900.1-201ENST00000622592 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
AP003900.1-201ENST00000622592 SHROOM4Q9ULL8 1493 aa26.26■■□□□ 1.79
AP003900.1-201ENST00000622592 SCRIBQ14160 1630 aa26.07■■□□□ 1.76
AP003900.1-201ENST00000622592 CUX2O14529 1486 aa25.84■■□□□ 1.73
AP003900.1-201ENST00000622592 ZCCHC6Q5VYS8 1495 aaKnown RBP25.81■■□□□ 1.72
AP003900.1-201ENST00000622592 DCAF1Q9Y4B6 1507 aa25.77■■□□□ 1.72
AP003900.1-201ENST00000622592 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
AP003900.1-201ENST00000622592 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
AP003900.1-201ENST00000622592 NESP48681 1621 aa25.29■■□□□ 1.64
AP003900.1-201ENST00000622592 NCAPD3P42695 1498 aa25.24■■□□□ 1.63
AP003900.1-201ENST00000622592 ATAD2BQ9ULI0 1458 aa25.06■■□□□ 1.6
AP003900.1-201ENST00000622592 THOC2Q8NI27 1593 aaKnown RBP25.02■■□□□ 1.6
AP003900.1-201ENST00000622592 SMARCA2P51531 1590 aa24.91■■□□□ 1.58
AP003900.1-201ENST00000622592 HMGXB3Q12766 1538 aa24.83■■□□□ 1.57
AP003900.1-201ENST00000622592 SENP3Q9H4L4 574 aaPredicted RBP24.78■■□□□ 1.56
AP003900.1-201ENST00000622592 PHF23Q9BUL5 403 aaPredicted RBP24.74■■□□□ 1.55
AP003900.1-201ENST00000622592 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
AP003900.1-201ENST00000622592 BAZ1BQ9UIG0 1483 aaKnown RBP24.71■■□□□ 1.55
AP003900.1-201ENST00000622592 PDS5BQ9NTI5 1447 aa24.7■■□□□ 1.55
AP003900.1-201ENST00000622592 LAMC3Q9Y6N6 1575 aa24.7■■□□□ 1.54
AP003900.1-201ENST00000622592 OSCARQ8IYS5 282 aa24.69■■□□□ 1.54
AP003900.1-201ENST00000622592 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
AP003900.1-201ENST00000622592 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
AP003900.1-201ENST00000622592 MRC2Q9UBG0 1479 aa24.54■■□□□ 1.52
AP003900.1-201ENST00000622592 CADPSQ9ULU8 1353 aa24.48■■□□□ 1.51
AP003900.1-201ENST00000622592 WDR62O43379 1518 aa24.46■■□□□ 1.51
AP003900.1-201ENST00000622592 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
AP003900.1-201ENST00000622592 RIMBP3CA6NJZ7 1639 aa24.35■■□□□ 1.49
AP003900.1-201ENST00000622592 RIMBP3BA6NNM3 1639 aa24.35■■□□□ 1.49
AP003900.1-201ENST00000622592 RIMBP3Q9UFD9 1639 aa24.35■■□□□ 1.49
AP003900.1-201ENST00000622592 TRHP20396 242 aaPredicted RBP24.31■■□□□ 1.48
AP003900.1-201ENST00000622592 MROH2BQ7Z745 1585 aa24.3■■□□□ 1.48
AP003900.1-201ENST00000622592 CYB5RLQ6IPT4 315 aa24.28■■□□□ 1.48
AP003900.1-201ENST00000622592 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
AP003900.1-201ENST00000622592 ARHGEF11O15085 1522 aa24.19■■□□□ 1.46
AP003900.1-201ENST00000622592 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
AP003900.1-201ENST00000622592 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
AP003900.1-201ENST00000622592 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
AP003900.1-201ENST00000622592 CFTRP13569 1480 aa23.94■■□□□ 1.42
AP003900.1-201ENST00000622592 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
AP003900.1-201ENST00000622592 WIZO95785 1651 aa23.92■■□□□ 1.42
AP003900.1-201ENST00000622592 FBLN2P98095 1184 aa23.79■■□□□ 1.4
AP003900.1-201ENST00000622592 IFT140Q96RY7 1462 aa23.79■■□□□ 1.4
AP003900.1-201ENST00000622592 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.38
AP003900.1-201ENST00000622592 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
AP003900.1-201ENST00000622592 CHD1O14646 1710 aa23.62■■□□□ 1.37
AP003900.1-201ENST00000622592 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
AP003900.1-201ENST00000622592 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
AP003900.1-201ENST00000622592 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
AP003900.1-201ENST00000622592 ILDR1Q86SU0 546 aaPredicted RBP23.45■■□□□ 1.34
AP003900.1-201ENST00000622592 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
AP003900.1-201ENST00000622592 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
AP003900.1-201ENST00000622592 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
AP003900.1-201ENST00000622592 CLASP1Q7Z460 1538 aa23.37■■□□□ 1.33
AP003900.1-201ENST00000622592 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
AP003900.1-201ENST00000622592 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
AP003900.1-201ENST00000622592 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
AP003900.1-201ENST00000622592 PRDM2Q13029 1718 aa23.34■■□□□ 1.33
AP003900.1-201ENST00000622592 DNMBPQ6XZF7 1577 aa23.34■■□□□ 1.33
AP003900.1-201ENST00000622592 SNAPC4Q5SXM2 1469 aa23.31■■□□□ 1.32
AP003900.1-201ENST00000622592 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
AP003900.1-201ENST00000622592 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
AP003900.1-201ENST00000622592 SOGA1O94964 1423 aa23.24■■□□□ 1.31
AP003900.1-201ENST00000622592 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
AP003900.1-201ENST00000622592 KDM4FA0A1W2PPD8 638 aa23.13■■□□□ 1.29
AP003900.1-201ENST00000622592 MAGI1Q96QZ7 1491 aaPredicted RBP23.1■■□□□ 1.29
AP003900.1-201ENST00000622592 ERCC6L2Q5T890 1561 aa23.09■■□□□ 1.29
AP003900.1-201ENST00000622592 SYNJ2O15056 1496 aa23.08■■□□□ 1.29
AP003900.1-201ENST00000622592 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
AP003900.1-201ENST00000622592 FGD5Q6ZNL6 1462 aa23.02■■□□□ 1.28
AP003900.1-201ENST00000622592 FAM69CQ0P6D2 419 aa22.93■■□□□ 1.26
AP003900.1-201ENST00000622592 FOXD1Q16676 465 aa22.92■■□□□ 1.26
AP003900.1-201ENST00000622592 PLPPR3Q6T4P5 718 aa22.92■■□□□ 1.26
AP003900.1-201ENST00000622592 WDR97A6NE52 1622 aa22.9■■□□□ 1.26
AP003900.1-201ENST00000622592 KIF13AQ9H1H9 1805 aa22.9■■□□□ 1.26
AP003900.1-201ENST00000622592 CUX1P39880 1505 aa22.87■■□□□ 1.25
AP003900.1-201ENST00000622592 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
AP003900.1-201ENST00000622592 PBRM1Q86U86 1689 aa22.77■■□□□ 1.24
AP003900.1-201ENST00000622592 GRIN2AQ12879 1464 aa22.76■■□□□ 1.23
AP003900.1-201ENST00000622592 ABCC10Q5T3U5 1492 aa22.75■■□□□ 1.23
AP003900.1-201ENST00000622592 NUP160Q12769 1436 aa22.74■■□□□ 1.23
AP003900.1-201ENST00000622592 NPM1P06748 294 aaKnown RBP eCLIP22.68■■□□□ 1.22
AP003900.1-201ENST00000622592 PRG4Q92954 1404 aaPredicted RBP22.67■■□□□ 1.22
AP003900.1-201ENST00000622592 ABCA10Q8WWZ4 1543 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms