RNA–Protein interactions for RNA: ENST00000448180.1

PRAMEF36P-202, Transcript of PRAME family member 36, pseudogene, humanhuman

BASIC

Gene PRAMEF36P, Length 1,452 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF36P-202ENST00000448180 NISCHQ9Y2I1 1504 aa28■■■□□ 2.07
PRAMEF36P-202ENST00000448180 CCDC180Q9P1Z9 1646 aa24.87■■□□□ 1.57
PRAMEF36P-202ENST00000448180 ABCC9O60706 1549 aa24.82■■□□□ 1.56
PRAMEF36P-202ENST00000448180 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
PRAMEF36P-202ENST00000448180 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
PRAMEF36P-202ENST00000448180 NACADO15069 1562 aa23.51■■□□□ 1.35
PRAMEF36P-202ENST00000448180 MYO15BQ96JP2 1530 aa23.26■■□□□ 1.31
PRAMEF36P-202ENST00000448180 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
PRAMEF36P-202ENST00000448180 PABPN1Q86U42 306 aaKnown RBP eCLIP23.24■■□□□ 1.31
PRAMEF36P-202ENST00000448180 DNAJC5BQ9UF47 199 aa23.16■■□□□ 1.3
PRAMEF36P-202ENST00000448180 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.28
PRAMEF36P-202ENST00000448180 UNC13AQ9UPW8 1703 aa23.03■■□□□ 1.28
PRAMEF36P-202ENST00000448180 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
PRAMEF36P-202ENST00000448180 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
PRAMEF36P-202ENST00000448180 SHROOM4Q9ULL8 1493 aa22.58■■□□□ 1.21
PRAMEF36P-202ENST00000448180 EIF4G1Q04637 1599 aaKnown RBP22.39■■□□□ 1.17
PRAMEF36P-202ENST00000448180 CC2D2AQ9P2K1 1620 aa22.36■■□□□ 1.17
PRAMEF36P-202ENST00000448180 CECR2Q9BXF3 1484 aa22.3■■□□□ 1.16
PRAMEF36P-202ENST00000448180 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
PRAMEF36P-202ENST00000448180 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.07
PRAMEF36P-202ENST00000448180 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
PRAMEF36P-202ENST00000448180 BAZ1AQ9NRL2 1556 aaPredicted RBP21.68■■□□□ 1.06
PRAMEF36P-202ENST00000448180 SMARCA2P51531 1590 aa21.64■■□□□ 1.05
PRAMEF36P-202ENST00000448180 MROH2BQ7Z745 1585 aa21.62■■□□□ 1.05
PRAMEF36P-202ENST00000448180 HMGXB3Q12766 1538 aa21.57■■□□□ 1.04
PRAMEF36P-202ENST00000448180 BAZ1BQ9UIG0 1483 aaKnown RBP21.54■■□□□ 1.04
PRAMEF36P-202ENST00000448180 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
PRAMEF36P-202ENST00000448180 NESP48681 1621 aa21.42■■□□□ 1.02
PRAMEF36P-202ENST00000448180 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
PRAMEF36P-202ENST00000448180 WIZO95785 1651 aa21.34■■□□□ 1.01
PRAMEF36P-202ENST00000448180 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
PRAMEF36P-202ENST00000448180 CUX2O14529 1486 aa21.18■□□□□ 0.98
PRAMEF36P-202ENST00000448180 LAMC3Q9Y6N6 1575 aa21.17■□□□□ 0.98
PRAMEF36P-202ENST00000448180 CADPSQ9ULU8 1353 aa21.15■□□□□ 0.98
PRAMEF36P-202ENST00000448180 PDS5BQ9NTI5 1447 aa21.09■□□□□ 0.97
PRAMEF36P-202ENST00000448180 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
PRAMEF36P-202ENST00000448180 THOC2Q8NI27 1593 aaKnown RBP21.03■□□□□ 0.96
PRAMEF36P-202ENST00000448180 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.96
PRAMEF36P-202ENST00000448180 DNAJC5Q9H3Z4 198 aa20.98■□□□□ 0.95
PRAMEF36P-202ENST00000448180 CFTRP13569 1480 aa20.95■□□□□ 0.94
PRAMEF36P-202ENST00000448180 FANCD2Q9BXW9 1451 aa20.9■□□□□ 0.94
PRAMEF36P-202ENST00000448180 MRC2Q9UBG0 1479 aa20.9■□□□□ 0.94
PRAMEF36P-202ENST00000448180 CCDC88BA6NC98 1476 aa20.89■□□□□ 0.93
PRAMEF36P-202ENST00000448180 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
PRAMEF36P-202ENST00000448180 WDR62O43379 1518 aa20.82■□□□□ 0.92
PRAMEF36P-202ENST00000448180 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
PRAMEF36P-202ENST00000448180 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
PRAMEF36P-202ENST00000448180 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
PRAMEF36P-202ENST00000448180 TOPBP1Q92547 1522 aa20.52■□□□□ 0.88
PRAMEF36P-202ENST00000448180 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
PRAMEF36P-202ENST00000448180 IFT140Q96RY7 1462 aa20.44■□□□□ 0.86
PRAMEF36P-202ENST00000448180 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
PRAMEF36P-202ENST00000448180 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
PRAMEF36P-202ENST00000448180 OSCARQ8IYS5 282 aa20.35■□□□□ 0.85
PRAMEF36P-202ENST00000448180 POLA1P09884 1462 aaPredicted RBP20.35■□□□□ 0.85
PRAMEF36P-202ENST00000448180 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
PRAMEF36P-202ENST00000448180 AQRO60306 1485 aaKnown RBP eCLIP20.32■□□□□ 0.84
PRAMEF36P-202ENST00000448180 TARBP1Q13395 1621 aaKnown RBP20.29■□□□□ 0.84
PRAMEF36P-202ENST00000448180 CUX1P39880 1505 aa20.29■□□□□ 0.84
PRAMEF36P-202ENST00000448180 SOGA1O94964 1423 aa20.27■□□□□ 0.84
PRAMEF36P-202ENST00000448180 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.83
PRAMEF36P-202ENST00000448180 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
PRAMEF36P-202ENST00000448180 TDRD9Q8NDG6 1382 aaKnown RBP20.25■□□□□ 0.83
PRAMEF36P-202ENST00000448180 TRIM41Q8WV44 630 aa20.22■□□□□ 0.83
PRAMEF36P-202ENST00000448180 FBLN2P98095 1184 aa20.15■□□□□ 0.82
PRAMEF36P-202ENST00000448180 SNAPC4Q5SXM2 1469 aa20.07■□□□□ 0.8
PRAMEF36P-202ENST00000448180 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
PRAMEF36P-202ENST00000448180 GRIN2BQ13224 1484 aa20.02■□□□□ 0.8
PRAMEF36P-202ENST00000448180 CHD1O14646 1710 aa20.02■□□□□ 0.79
PRAMEF36P-202ENST00000448180 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
PRAMEF36P-202ENST00000448180 CHMP7Q8WUX9 453 aaPredicted RBP20.01■□□□□ 0.79
PRAMEF36P-202ENST00000448180 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
PRAMEF36P-202ENST00000448180 GAPVD1Q14C86 1478 aa20■□□□□ 0.79
PRAMEF36P-202ENST00000448180 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
PRAMEF36P-202ENST00000448180 ARHGEF11O15085 1522 aa19.98■□□□□ 0.79
PRAMEF36P-202ENST00000448180 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
PRAMEF36P-202ENST00000448180 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
PRAMEF36P-202ENST00000448180 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
PRAMEF36P-202ENST00000448180 TOP2BQ02880 1626 aa19.97■□□□□ 0.79
PRAMEF36P-202ENST00000448180 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
PRAMEF36P-202ENST00000448180 BIVM-ERCC5R4GMW8 1640 aa19.93■□□□□ 0.78
PRAMEF36P-202ENST00000448180 SYNJ2O15056 1496 aa19.93■□□□□ 0.78
PRAMEF36P-202ENST00000448180 ABCA5Q8WWZ7 1642 aa19.93■□□□□ 0.78
PRAMEF36P-202ENST00000448180 CYB5RLQ6IPT4 315 aa19.91■□□□□ 0.78
PRAMEF36P-202ENST00000448180 PBRM1Q86U86 1689 aa19.88■□□□□ 0.77
PRAMEF36P-202ENST00000448180 CLASP1Q7Z460 1538 aa19.85■□□□□ 0.77
PRAMEF36P-202ENST00000448180 ARAP1Q96P48 1450 aa19.83■□□□□ 0.77
PRAMEF36P-202ENST00000448180 GRIN2AQ12879 1464 aa19.77■□□□□ 0.76
PRAMEF36P-202ENST00000448180 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
PRAMEF36P-202ENST00000448180 FHAD1B1AJZ9 1412 aa19.75■□□□□ 0.75
PRAMEF36P-202ENST00000448180 ERICH3Q5RHP9 1530 aa19.73■□□□□ 0.75
PRAMEF36P-202ENST00000448180 NUP160Q12769 1436 aa19.71■□□□□ 0.75
PRAMEF36P-202ENST00000448180 CEP170Q5SW79 1584 aa19.69■□□□□ 0.74
PRAMEF36P-202ENST00000448180 IGF1RP08069 1367 aa19.65■□□□□ 0.74
PRAMEF36P-202ENST00000448180 ERCC6L2Q5T890 1561 aa19.64■□□□□ 0.73
PRAMEF36P-202ENST00000448180 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
PRAMEF36P-202ENST00000448180 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.72
PRAMEF36P-202ENST00000448180 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
PRAMEF36P-202ENST00000448180 PRG4Q92954 1404 aaPredicted RBP19.53■□□□□ 0.72
PRAMEF36P-202ENST00000448180 SHROOM2Q13796 1616 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms