Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 AC139530.1-201ENST00000575312 1977 ntBASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV17A0A0B4J275 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV17A0A0B4J275 MKRN4P-201ENST00000444706 1521 ntBASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 TSPY20P-201ENST00000450910 630 ntBASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 KRT16P2-201ENST00000414673 1423 ntBASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV17A0A0B4J275 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV17A0A0B4J275 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 AL512625.2-201ENST00000417533 625 ntBASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV17A0A0B4J275 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV17A0A0B4J275 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms