Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 CA15P2-201ENST00000611168 834 ntBASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 AC009086.3-201ENST00000623486 1008 ntBASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 AC087393.1-201ENST00000582896 145 ntBASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-2A0A0B4J235 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV13-2A0A0B4J235 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 MACF1-219ENST00000484793 834 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 AC022413.1-201ENST00000624602 984 ntBASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV13-2A0A0B4J235 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 GABARAPL3-202ENST00000624044 1851 ntBASIC14.01□□□□□ -0.17
TRAV13-2A0A0B4J235 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms