Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 CYC1-204ENST00000533444 1832 ntTSL 1 (best)31.07■■■□□ 2.564e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-203ENST00000527038 629 ntTSL 226.79■■□□□ 1.884e-6■□□□□ 8.7
DDX52Q9Y2R4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.744e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-201ENST00000526354 568 ntTSL 225.47■■□□□ 1.674e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-214ENST00000534233 711 ntTSL 224.14■■□□□ 1.454e-6■□□□□ 8.7
DDX52Q9Y2R4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.92■■□□□ 1.422e-10■□□□□ 8.7
DDX52Q9Y2R4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.92■■□□□ 1.424e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-206ENST00000530467 552 ntTSL 422.94■■□□□ 1.264e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-211ENST00000532421 582 ntTSL 222.47■■□□□ 1.194e-6■□□□□ 8.7
DDX52Q9Y2R4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.164e-6■□□□□ 8.7
DDX52Q9Y2R4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.26■■□□□ 1.152e-10■□□□□ 8.7
DDX52Q9Y2R4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.024e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.4■■□□□ 1.024e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-205ENST00000529174 549 ntTSL 421.24■□□□□ 0.994e-6■□□□□ 8.7
DDX52Q9Y2R4 TRMT2A-209ENST00000463710 757 ntTSL 320.32■□□□□ 0.844e-6■□□□□ 8.7
DDX52Q9Y2R4 TRMT2A-212ENST00000471040 848 ntTSL 320.32■□□□□ 0.844e-6■□□□□ 8.7
DDX52Q9Y2R4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.844e-6■□□□□ 8.7
DDX52Q9Y2R4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.16■□□□□ 0.822e-10■□□□□ 8.7
DDX52Q9Y2R4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.82e-10■□□□□ 8.7
DDX52Q9Y2R4 TRMT2A-218ENST00000492988 854 ntTSL 519.88■□□□□ 0.774e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-215ENST00000543287 2464 ntTSL 219.82■□□□□ 0.764e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-222ENST00000622474 549 ntTSL 219.29■□□□□ 0.684e-6■□□□□ 8.7
DDX52Q9Y2R4 TRMT2A-217ENST00000488335 379 ntTSL 319.1■□□□□ 0.654e-6■□□□□ 8.7
DDX52Q9Y2R4 GTPBP2-203ENST00000419497 1394 ntTSL 218.81■□□□□ 0.64e-6■□□□□ 8.7
DDX52Q9Y2R4 TRMT2A-220ENST00000494820 1098 ntTSL 518.45■□□□□ 0.544e-6■□□□□ 8.7
DDX52Q9Y2R4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.484e-6■□□□□ 8.7
DDX52Q9Y2R4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.484e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-216ENST00000610597 491 ntTSL 417.72■□□□□ 0.434e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.01■□□□□ 0.314e-6■□□□□ 8.7
DDX52Q9Y2R4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.314e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.72■□□□□ 0.274e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-210ENST00000531968 550 ntTSL 416.34■□□□□ 0.214e-6■□□□□ 8.7
DDX52Q9Y2R4 PRSS21-206ENST00000574265 860 ntTSL 315.21■□□□□ 0.034e-6■□□□□ 8.7
DDX52Q9Y2R4 GTPBP2-204ENST00000432918 1850 ntTSL 314.5□□□□□ -0.094e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC14.32□□□□□ -0.124e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.144e-6■□□□□ 8.7
DDX52Q9Y2R4 C22orf39-204ENST00000509549 2979 ntTSL 214.18□□□□□ -0.142e-10■□□□□ 8.7
DDX52Q9Y2R4 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC13.64□□□□□ -0.234e-6■□□□□ 8.7
DDX52Q9Y2R4 HIRA-203ENST00000452818 453 ntTSL 513.24□□□□□ -0.292e-10■□□□□ 8.7
DDX52Q9Y2R4 GTPBP2-208ENST00000476510 2816 ntTSL 512.78□□□□□ -0.364e-6■□□□□ 8.7
DDX52Q9Y2R4 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.48□□□□□ -0.414e-6■□□□□ 8.7
DDX52Q9Y2R4 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.31□□□□□ -0.442e-10■□□□□ 8.7
DDX52Q9Y2R4 SNX9-202ENST00000614703 542 ntTSL 411.31□□□□□ -0.64e-6■□□□□ 8.7
DDX52Q9Y2R4 PRSS21-209ENST00000575739 378 ntTSL 310.63□□□□□ -0.714e-6■□□□□ 8.7
DDX52Q9Y2R4 GTPBP2-210ENST00000496137 516 ntTSL 38.06□□□□□ -1.124e-6■□□□□ 8.7
DDX52Q9Y2R4 SNX9-203ENST00000614800 553 ntTSL 47.71□□□□□ -1.184e-6■□□□□ 8.7
DDX52Q9Y2R4 FAM208B-205ENST00000473789 506 ntTSL 528.7■■■□□ 2.187e-7■□□□□ 8.7
DDX52Q9Y2R4 FAM208B-210ENST00000496681 522 ntTSL 328.05■■■□□ 2.087e-7■□□□□ 8.7
DDX52Q9Y2R4 FAM208B-207ENST00000480839 540 ntTSL 322.92■■□□□ 1.267e-7■□□□□ 8.7
DDX52Q9Y2R4 FAM208B-206ENST00000477043 514 ntTSL 219.68■□□□□ 0.747e-7■□□□□ 8.7
DDX52Q9Y2R4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.317e-7■□□□□ 8.7
DDX52Q9Y2R4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.892e-6■□□□□ 8.7
DDX52Q9Y2R4 GANAB-214ENST00000534613 737 ntTSL 518.63■□□□□ 0.572e-6■□□□□ 8.7
DDX52Q9Y2R4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.272e-6■□□□□ 8.7
DDX52Q9Y2R4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.122e-6■□□□□ 8.7
DDX52Q9Y2R4 GANAB-207ENST00000526732 824 ntTSL 214.78□□□□□ -0.042e-6■□□□□ 8.7
DDX52Q9Y2R4 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC14.14□□□□□ -0.152e-6■□□□□ 8.7
DDX52Q9Y2R4 GANAB-213ENST00000534422 702 ntTSL 513.54□□□□□ -0.242e-6■□□□□ 8.7
DDX52Q9Y2R4 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC13.22□□□□□ -0.292e-6■□□□□ 8.7
DDX52Q9Y2R4 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.312e-6■□□□□ 8.7
DDX52Q9Y2R4 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.432e-6■□□□□ 8.7
DDX52Q9Y2R4 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.542e-6■□□□□ 8.7
DDX52Q9Y2R4 FGB-206ENST00000502545 1320 ntTSL 511.53□□□□□ -0.565e-10■□□□□ 8.7
DDX52Q9Y2R4 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.592e-6■□□□□ 8.7
DDX52Q9Y2R4 GANAB-211ENST00000532402 3718 ntTSL 1 (best)11.18□□□□□ -0.622e-6■□□□□ 8.7
DDX52Q9Y2R4 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.685e-10■□□□□ 8.7
DDX52Q9Y2R4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.97□□□□□ -1.455e-10■□□□□ 8.7
DDX52Q9Y2R4 FASTK-213ENST00000482806 1826 ntTSL 526.65■■□□□ 1.863e-9■□□□□ 8.6
DDX52Q9Y2R4 FASTK-216ENST00000496663 818 ntTSL 226.21■■□□□ 1.793e-9■□□□□ 8.6
DDX52Q9Y2R4 FASTK-215ENST00000489884 1751 ntTSL 1 (best)25.9■■□□□ 1.743e-9■□□□□ 8.6
DDX52Q9Y2R4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.48■■□□□ 1.673e-9■□□□□ 8.6
DDX52Q9Y2R4 FASTK-205ENST00000461979 720 ntTSL 525.23■■□□□ 1.633e-9■□□□□ 8.6
DDX52Q9Y2R4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.72■■□□□ 1.553e-9■□□□□ 8.6
DDX52Q9Y2R4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.413e-9■□□□□ 8.6
DDX52Q9Y2R4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.37■■□□□ 1.013e-9■□□□□ 8.6
DDX52Q9Y2R4 FASTK-204ENST00000460980 1521 ntTSL 518.73■□□□□ 0.593e-9■□□□□ 8.6
DDX52Q9Y2R4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.36■□□□□ 0.538e-13■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-203ENST00000446331 1558 ntTSL 227.8■■■□□ 2.048e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.598e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.74■■□□□ 1.398e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-207ENST00000525607 1773 ntTSL 222.37■■□□□ 1.178e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-206ENST00000525571 810 ntTSL 322.02■■□□□ 1.128e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.09■□□□□ 0.978e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-217ENST00000530337 741 ntTSL 320.98■□□□□ 0.958e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.21■□□□□ 0.518e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.348e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-215ENST00000529464 932 ntTSL 1 (best)16.94■□□□□ 0.38e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.38e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-204ENST00000525283 898 ntTSL 314.85□□□□□ -0.038e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-211ENST00000527045 642 ntTSL 1 (best)10.06□□□□□ -0.88e-7■□□□□ 8.5
DDX52Q9Y2R4 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.19□□□□□ -1.18e-7■□□□□ 8.5
DDX52Q9Y2R4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.361e-11■□□□□ 8.4
DDX52Q9Y2R4 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.281e-11■□□□□ 8.4
DDX52Q9Y2R4 SERPINA3-208ENST00000556968 1289 ntTSL 1 (best)13.13□□□□□ -0.311e-11■□□□□ 8.4
DDX52Q9Y2R4 SERPINA3-201ENST00000393078 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.321e-11■□□□□ 8.4
DDX52Q9Y2R4 SERPINA3-206ENST00000555820 981 ntTSL 512.37□□□□□ -0.431e-11■□□□□ 8.4
DDX52Q9Y2R4 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.771e-11■□□□□ 8.4
DDX52Q9Y2R4 SERPINA3-207ENST00000556388 480 ntTSL 410.25□□□□□ -0.771e-11■□□□□ 8.4
DDX52Q9Y2R4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.89■□□□□ 0.458e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.36■□□□□ 0.378e-10■□□□□ 8.4
Retrieved 100 of 4,483 protein–RNA pairs in 58.2 ms