RNA–Protein interactions for RNA: ENST00000393078.4

SERPINA3-201, Transcript of serpin family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERPINA3, Length 1,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA3-201ENST00000393078 NISCHQ9Y2I1 1504 aa24.04■■□□□ 1.44
SERPINA3-201ENST00000393078 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
SERPINA3-201ENST00000393078 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
SERPINA3-201ENST00000393078 SHROOM4Q9ULL8 1493 aa20.13■□□□□ 0.81
SERPINA3-201ENST00000393078 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
SERPINA3-201ENST00000393078 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
SERPINA3-201ENST00000393078 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.71
SERPINA3-201ENST00000393078 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
SERPINA3-201ENST00000393078 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
SERPINA3-201ENST00000393078 ABCC9O60706 1549 aa19.24■□□□□ 0.67
SERPINA3-201ENST00000393078 NACADO15069 1562 aa19.23■□□□□ 0.67
SERPINA3-201ENST00000393078 SCRIBQ14160 1630 aa19.13■□□□□ 0.65
SERPINA3-201ENST00000393078 HRCP23327 699 aa19.04■□□□□ 0.64
SERPINA3-201ENST00000393078 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
SERPINA3-201ENST00000393078 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
SERPINA3-201ENST00000393078 PCGF6Q9BYE7 350 aa18.72■□□□□ 0.59
SERPINA3-201ENST00000393078 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
SERPINA3-201ENST00000393078 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.57
SERPINA3-201ENST00000393078 TRIM26Q12899 539 aaPredicted RBP18.61■□□□□ 0.57
SERPINA3-201ENST00000393078 WIZO95785 1651 aa18.59■□□□□ 0.57
SERPINA3-201ENST00000393078 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.56
SERPINA3-201ENST00000393078 LOC105371045A0A1W2PR82 267 aa18.55■□□□□ 0.56
SERPINA3-201ENST00000393078 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
SERPINA3-201ENST00000393078 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
SERPINA3-201ENST00000393078 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
SERPINA3-201ENST00000393078 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
SERPINA3-201ENST00000393078 BICRAQ9NZM4 1560 aa18.41■□□□□ 0.54
SERPINA3-201ENST00000393078 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
SERPINA3-201ENST00000393078 TOP2AP11388 1531 aaKnown RBP18.34■□□□□ 0.53
SERPINA3-201ENST00000393078 SMARCA2P51531 1590 aa18.23■□□□□ 0.51
SERPINA3-201ENST00000393078 PPARGC1BQ86YN6 1023 aaKnown RBP18.21■□□□□ 0.51
SERPINA3-201ENST00000393078 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
SERPINA3-201ENST00000393078 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.5
SERPINA3-201ENST00000393078 FAM9AQ8IZU1 332 aaPredicted RBP18.14■□□□□ 0.49
SERPINA3-201ENST00000393078 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
SERPINA3-201ENST00000393078 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
SERPINA3-201ENST00000393078 EEA1Q15075 1411 aa18.01■□□□□ 0.47
SERPINA3-201ENST00000393078 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
SERPINA3-201ENST00000393078 WRNQ14191 1432 aaPredicted RBP eCLIP17.96■□□□□ 0.47
SERPINA3-201ENST00000393078 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
SERPINA3-201ENST00000393078 EHMT2Q96KQ7 1210 aa17.87■□□□□ 0.45
SERPINA3-201ENST00000393078 PELP1Q8IZL8 1130 aaKnown RBP17.87■□□□□ 0.45
SERPINA3-201ENST00000393078 TNIKQ9UKE5 1360 aa17.83■□□□□ 0.44
SERPINA3-201ENST00000393078 SOGA1O94964 1423 aa17.8■□□□□ 0.44
SERPINA3-201ENST00000393078 BAZ1BQ9UIG0 1483 aaKnown RBP17.8■□□□□ 0.44
SERPINA3-201ENST00000393078 NCAPD3P42695 1498 aa17.77■□□□□ 0.43
SERPINA3-201ENST00000393078 SYNJ1O43426 1573 aa17.76■□□□□ 0.43
SERPINA3-201ENST00000393078 CEP162Q5TB80 1403 aa17.75■□□□□ 0.43
SERPINA3-201ENST00000393078 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
SERPINA3-201ENST00000393078 RUSC2Q8N2Y8 1516 aa17.75■□□□□ 0.43
SERPINA3-201ENST00000393078 KIF21BO75037 1637 aa17.72■□□□□ 0.43
SERPINA3-201ENST00000393078 GOLGA3Q08378 1498 aa17.71■□□□□ 0.43
SERPINA3-201ENST00000393078 CCER1Q8TC90 406 aaPredicted RBP17.69■□□□□ 0.42
SERPINA3-201ENST00000393078 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
SERPINA3-201ENST00000393078 BIVM-ERCC5R4GMW8 1640 aa17.63■□□□□ 0.41
SERPINA3-201ENST00000393078 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
SERPINA3-201ENST00000393078 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
SERPINA3-201ENST00000393078 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
SERPINA3-201ENST00000393078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
SERPINA3-201ENST00000393078 UBTFP17480 764 aaKnown RBP17.52■□□□□ 0.39
SERPINA3-201ENST00000393078 CENPBP07199 599 aaPredicted RBP17.5■□□□□ 0.39
SERPINA3-201ENST00000393078 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.39
SERPINA3-201ENST00000393078 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
SERPINA3-201ENST00000393078 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
SERPINA3-201ENST00000393078 CLIP1P30622 1438 aa17.43■□□□□ 0.38
SERPINA3-201ENST00000393078 VPS8Q8N3P4 1428 aa17.43■□□□□ 0.38
SERPINA3-201ENST00000393078 ACIN1Q9UKV3 1341 aaKnown RBP17.43■□□□□ 0.38
SERPINA3-201ENST00000393078 CFTRP13569 1480 aa17.42■□□□□ 0.38
SERPINA3-201ENST00000393078 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
SERPINA3-201ENST00000393078 RAPGEF2Q9Y4G8 1499 aa17.42■□□□□ 0.38
SERPINA3-201ENST00000393078 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
SERPINA3-201ENST00000393078 CUX1P39880 1505 aa17.38■□□□□ 0.37
SERPINA3-201ENST00000393078 ZNF316A6NFI3 1004 aaPredicted RBP17.34■□□□□ 0.37
SERPINA3-201ENST00000393078 PRXQ9BXM0 1461 aa17.33■□□□□ 0.37
SERPINA3-201ENST00000393078 APLP2Q06481 763 aa17.33■□□□□ 0.37
SERPINA3-201ENST00000393078 TTBK1Q5TCY1 1321 aaPredicted RBP17.32■□□□□ 0.36
SERPINA3-201ENST00000393078 CLSPNQ9HAW4 1339 aa17.32■□□□□ 0.36
SERPINA3-201ENST00000393078 CADPSQ9ULU8 1353 aa17.3■□□□□ 0.36
SERPINA3-201ENST00000393078 KIF27Q86VH2 1401 aa17.22■□□□□ 0.35
SERPINA3-201ENST00000393078 ARAP1Q96P48 1450 aa17.22■□□□□ 0.35
SERPINA3-201ENST00000393078 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
SERPINA3-201ENST00000393078 MYT1Q01538 1121 aa17.16■□□□□ 0.34
SERPINA3-201ENST00000393078 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
SERPINA3-201ENST00000393078 LAMC3Q9Y6N6 1575 aa17.08■□□□□ 0.33
SERPINA3-201ENST00000393078 CUX2O14529 1486 aa17.07■□□□□ 0.32
SERPINA3-201ENST00000393078 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
SERPINA3-201ENST00000393078 RRBP1Q9P2E9 1410 aaKnown RBP17.07■□□□□ 0.32
SERPINA3-201ENST00000393078 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
SERPINA3-201ENST00000393078 ARHGAP35Q9NRY4 1499 aa17.06■□□□□ 0.32
SERPINA3-201ENST00000393078 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
SERPINA3-201ENST00000393078 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
SERPINA3-201ENST00000393078 RANGAP1P46060 587 aaPredicted RBP17.03■□□□□ 0.32
SERPINA3-201ENST00000393078 IGF1RP08069 1367 aa17■□□□□ 0.31
SERPINA3-201ENST00000393078 DNMBPQ6XZF7 1577 aa16.99■□□□□ 0.31
SERPINA3-201ENST00000393078 NESP48681 1621 aa16.98■□□□□ 0.31
SERPINA3-201ENST00000393078 DHX57Q6P158 1386 aaKnown RBP16.98■□□□□ 0.31
SERPINA3-201ENST00000393078 TIAM1Q13009 1591 aa16.95■□□□□ 0.3
SERPINA3-201ENST00000393078 CFAP43Q8NDM7 1665 aa16.95■□□□□ 0.3
SERPINA3-201ENST00000393078 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
SERPINA3-201ENST00000393078 PDS5BQ9NTI5 1447 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms