RNA–Protein interactions for RNA: ENST00000488335.1

TRMT2A-217, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 3

Gene TRMT2A, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-217ENST00000488335 NISCHQ9Y2I1 1504 aa40.72■■■■■ 4.11
TRMT2A-217ENST00000488335 ABCC9O60706 1549 aa36.89■■■■□ 3.5
TRMT2A-217ENST00000488335 CCDC180Q9P1Z9 1646 aa36.59■■■■□ 3.45
TRMT2A-217ENST00000488335 RB1CC1Q8TDY2 1594 aa35■■■■□ 3.19
TRMT2A-217ENST00000488335 DNAJC5BQ9UF47 199 aa34.9■■■■□ 3.18
TRMT2A-217ENST00000488335 NACADO15069 1562 aa34.7■■■■□ 3.15
TRMT2A-217ENST00000488335 DCAF8L2P0C7V8 631 aa34.59■■■■□ 3.13
TRMT2A-217ENST00000488335 PABPN1Q86U42 306 aaKnown RBP eCLIP34.37■■■■□ 3.09
TRMT2A-217ENST00000488335 UNC13AQ9UPW8 1703 aa34.15■■■■□ 3.06
TRMT2A-217ENST00000488335 MYO15BQ96JP2 1530 aa34.14■■■■□ 3.06
TRMT2A-217ENST00000488335 BICRAQ9NZM4 1560 aa33.96■■■■□ 3.03
TRMT2A-217ENST00000488335 ZCCHC6Q5VYS8 1495 aaKnown RBP33.65■■■□□ 2.98
TRMT2A-217ENST00000488335 DCAF1Q9Y4B6 1507 aa33.61■■■□□ 2.97
TRMT2A-217ENST00000488335 SHROOM4Q9ULL8 1493 aa33.49■■■□□ 2.95
TRMT2A-217ENST00000488335 SCRIBQ14160 1630 aa33.33■■■□□ 2.93
TRMT2A-217ENST00000488335 CC2D2AQ9P2K1 1620 aa33.29■■■□□ 2.92
TRMT2A-217ENST00000488335 CECR2Q9BXF3 1484 aa33.27■■■□□ 2.92
TRMT2A-217ENST00000488335 EIF4G1Q04637 1599 aaKnown RBP33.16■■■□□ 2.9
TRMT2A-217ENST00000488335 DNAJC5Q9H3Z4 198 aa32.25■■■□□ 2.75
TRMT2A-217ENST00000488335 NCAPD3P42695 1498 aa32.07■■■□□ 2.72
TRMT2A-217ENST00000488335 ATAD2BQ9ULI0 1458 aa31.92■■■□□ 2.7
TRMT2A-217ENST00000488335 CUX2O14529 1486 aa31.9■■■□□ 2.7
TRMT2A-217ENST00000488335 ERCC6Q03468 1493 aa31.87■■■□□ 2.69
TRMT2A-217ENST00000488335 SMARCA2P51531 1590 aa31.8■■■□□ 2.68
TRMT2A-217ENST00000488335 SMARCA4P51532 1647 aa31.78■■■□□ 2.68
TRMT2A-217ENST00000488335 HMGXB3Q12766 1538 aa31.75■■■□□ 2.67
TRMT2A-217ENST00000488335 BAZ1AQ9NRL2 1556 aaPredicted RBP31.61■■■□□ 2.65
TRMT2A-217ENST00000488335 NESP48681 1621 aa31.6■■■□□ 2.65
TRMT2A-217ENST00000488335 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
TRMT2A-217ENST00000488335 PEG3Q9GZU2 1588 aa31.48■■■□□ 2.63
TRMT2A-217ENST00000488335 MROH2BQ7Z745 1585 aa31.35■■■□□ 2.61
TRMT2A-217ENST00000488335 LAMC3Q9Y6N6 1575 aa31.35■■■□□ 2.61
TRMT2A-217ENST00000488335 THOC2Q8NI27 1593 aaKnown RBP31.29■■■□□ 2.6
TRMT2A-217ENST00000488335 PDS5BQ9NTI5 1447 aa31.23■■■□□ 2.59
TRMT2A-217ENST00000488335 KIF21AQ7Z4S6 1674 aa31.16■■■□□ 2.58
TRMT2A-217ENST00000488335 CADPSQ9ULU8 1353 aa31.1■■■□□ 2.57
TRMT2A-217ENST00000488335 WIZO95785 1651 aa30.96■■■□□ 2.55
TRMT2A-217ENST00000488335 MRC2Q9UBG0 1479 aa30.92■■■□□ 2.54
TRMT2A-217ENST00000488335 WDR62O43379 1518 aa30.84■■■□□ 2.53
TRMT2A-217ENST00000488335 CEP164Q9UPV0 1460 aa30.75■■■□□ 2.51
TRMT2A-217ENST00000488335 TRIM41Q8WV44 630 aa30.72■■■□□ 2.51
TRMT2A-217ENST00000488335 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.51
TRMT2A-217ENST00000488335 CFTRP13569 1480 aa30.66■■■□□ 2.5
TRMT2A-217ENST00000488335 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
TRMT2A-217ENST00000488335 TOP2AP11388 1531 aaKnown RBP30.54■■■□□ 2.48
TRMT2A-217ENST00000488335 OSCARQ8IYS5 282 aa30.5■■■□□ 2.47
TRMT2A-217ENST00000488335 URB2Q14146 1524 aaKnown RBP30.45■■■□□ 2.47
TRMT2A-217ENST00000488335 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
TRMT2A-217ENST00000488335 PRDM2Q13029 1718 aa30.25■■■□□ 2.43
TRMT2A-217ENST00000488335 IFT140Q96RY7 1462 aa30.17■■■□□ 2.42
TRMT2A-217ENST00000488335 ZNF608Q9ULD9 1512 aaPredicted RBP30.12■■■□□ 2.41
TRMT2A-217ENST00000488335 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
TRMT2A-217ENST00000488335 ABCC8Q09428 1581 aa30.05■■■□□ 2.4
TRMT2A-217ENST00000488335 RIMBP3CA6NJZ7 1639 aa30■■■□□ 2.39
TRMT2A-217ENST00000488335 RIMBP3BA6NNM3 1639 aa30■■■□□ 2.39
TRMT2A-217ENST00000488335 RIMBP3Q9UFD9 1639 aa30■■■□□ 2.39
TRMT2A-217ENST00000488335 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
TRMT2A-217ENST00000488335 EIF4G3O43432 1585 aaKnown RBP29.9■■■□□ 2.38
TRMT2A-217ENST00000488335 ARHGEF11O15085 1522 aa29.9■■■□□ 2.38
TRMT2A-217ENST00000488335 AQRO60306 1485 aaKnown RBP eCLIP29.86■■■□□ 2.373e-7■■■■□ 22.4
TRMT2A-217ENST00000488335 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
TRMT2A-217ENST00000488335 CYB5RLQ6IPT4 315 aa29.8■■■□□ 2.36
TRMT2A-217ENST00000488335 POLA1P09884 1462 aaPredicted RBP29.76■■■□□ 2.35
TRMT2A-217ENST00000488335 FBLN2P98095 1184 aa29.76■■■□□ 2.35
TRMT2A-217ENST00000488335 CHD1O14646 1710 aa29.73■■■□□ 2.35
TRMT2A-217ENST00000488335 SOGA1O94964 1423 aa29.68■■■□□ 2.34
TRMT2A-217ENST00000488335 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
TRMT2A-217ENST00000488335 TDRD9Q8NDG6 1382 aaKnown RBP29.64■■■□□ 2.34
TRMT2A-217ENST00000488335 ARAP1Q96P48 1450 aa29.58■■■□□ 2.33
TRMT2A-217ENST00000488335 TRHP20396 242 aaPredicted RBP29.55■■■□□ 2.32
TRMT2A-217ENST00000488335 FGD5Q6ZNL6 1462 aa29.54■■■□□ 2.32
TRMT2A-217ENST00000488335 CHMP7Q8WUX9 453 aaPredicted RBP29.51■■■□□ 2.31
TRMT2A-217ENST00000488335 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
TRMT2A-217ENST00000488335 WDR97A6NE52 1622 aa29.5■■■□□ 2.31
TRMT2A-217ENST00000488335 CUX1P39880 1505 aa29.45■■■□□ 2.31
TRMT2A-217ENST00000488335 MAGI1Q96QZ7 1491 aaPredicted RBP29.42■■■□□ 2.3
TRMT2A-217ENST00000488335 GRIN2BQ13224 1484 aa29.42■■■□□ 2.3
TRMT2A-217ENST00000488335 CLASP1Q7Z460 1538 aa29.4■■■□□ 2.3
TRMT2A-217ENST00000488335 SYNJ1O43426 1573 aa29.38■■■□□ 2.29
TRMT2A-217ENST00000488335 SYNJ2O15056 1496 aa29.34■■■□□ 2.29
TRMT2A-217ENST00000488335 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
TRMT2A-217ENST00000488335 PBRM1Q86U86 1689 aa29.21■■■□□ 2.27
TRMT2A-217ENST00000488335 ABCA10Q8WWZ4 1543 aa29.2■■■□□ 2.27
TRMT2A-217ENST00000488335 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
TRMT2A-217ENST00000488335 ABCA5Q8WWZ7 1642 aa29.13■■■□□ 2.25
TRMT2A-217ENST00000488335 WRNQ14191 1432 aaPredicted RBP eCLIP29.06■■■□□ 2.24
TRMT2A-217ENST00000488335 GRIN2AQ12879 1464 aa29.02■■■□□ 2.24
TRMT2A-217ENST00000488335 NUP160Q12769 1436 aa28.94■■■□□ 2.22
TRMT2A-217ENST00000488335 ERCC6L2Q5T890 1561 aa28.93■■■□□ 2.22
TRMT2A-217ENST00000488335 ADAMTS12P58397 1594 aa28.92■■■□□ 2.22
TRMT2A-217ENST00000488335 TOP2BQ02880 1626 aa28.92■■■□□ 2.22
TRMT2A-217ENST00000488335 FHAD1B1AJZ9 1412 aa28.91■■■□□ 2.22
TRMT2A-217ENST00000488335 BIVM-ERCC5R4GMW8 1640 aa28.91■■■□□ 2.22
TRMT2A-217ENST00000488335 CEP170Q5SW79 1584 aa28.9■■■□□ 2.22
TRMT2A-217ENST00000488335 AEBP2Q6ZN18 517 aaPredicted RBP28.88■■■□□ 2.21
TRMT2A-217ENST00000488335 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
TRMT2A-217ENST00000488335 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
TRMT2A-217ENST00000488335 JPH4Q96JJ6 628 aa28.73■■■□□ 2.19
TRMT2A-217ENST00000488335 PRG4Q92954 1404 aaPredicted RBP28.71■■■□□ 2.19
TRMT2A-217ENST00000488335 NPM1P06748 294 aaKnown RBP eCLIP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms