RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 NISCHQ9Y2I1 1504 aa19.11■□□□□ 0.65
AL049839.2-201ENST00000553947 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
AL049839.2-201ENST00000553947 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
AL049839.2-201ENST00000553947 SHROOM4Q9ULL8 1493 aa16.11■□□□□ 0.17
AL049839.2-201ENST00000553947 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
AL049839.2-201ENST00000553947 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
AL049839.2-201ENST00000553947 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
AL049839.2-201ENST00000553947 ABCC9O60706 1549 aa15.32■□□□□ 0.04
AL049839.2-201ENST00000553947 MYO15BQ96JP2 1530 aa15.3■□□□□ 0.04
AL049839.2-201ENST00000553947 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
AL049839.2-201ENST00000553947 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
AL049839.2-201ENST00000553947 NACADO15069 1562 aa15.15■□□□□ 0.02
AL049839.2-201ENST00000553947 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
AL049839.2-201ENST00000553947 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
AL049839.2-201ENST00000553947 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
AL049839.2-201ENST00000553947 CECR2Q9BXF3 1484 aa14.93□□□□□ -0.02
AL049839.2-201ENST00000553947 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
AL049839.2-201ENST00000553947 HRCP23327 699 aa14.84□□□□□ -0.03
AL049839.2-201ENST00000553947 WIZO95785 1651 aa14.76□□□□□ -0.05
AL049839.2-201ENST00000553947 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
AL049839.2-201ENST00000553947 LOC105371045A0A1W2PR82 267 aa14.72□□□□□ -0.05
AL049839.2-201ENST00000553947 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
AL049839.2-201ENST00000553947 TRIM41Q8WV44 630 aa14.62□□□□□ -0.07
AL049839.2-201ENST00000553947 PPARGC1BQ86YN6 1023 aaKnown RBP14.61□□□□□ -0.07
AL049839.2-201ENST00000553947 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
AL049839.2-201ENST00000553947 SMARCA4P51532 1647 aa14.6□□□□□ -0.07
AL049839.2-201ENST00000553947 BICRAQ9NZM4 1560 aa14.58□□□□□ -0.07
AL049839.2-201ENST00000553947 MYT1Q01538 1121 aa14.52□□□□□ -0.08
AL049839.2-201ENST00000553947 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
AL049839.2-201ENST00000553947 FAM9AQ8IZU1 332 aaPredicted RBP14.5□□□□□ -0.09
AL049839.2-201ENST00000553947 PCGF6Q9BYE7 350 aa14.49□□□□□ -0.09
AL049839.2-201ENST00000553947 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
AL049839.2-201ENST00000553947 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.09
AL049839.2-201ENST00000553947 SMARCA2P51531 1590 aa14.44□□□□□ -0.1
AL049839.2-201ENST00000553947 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
AL049839.2-201ENST00000553947 ABCC8Q09428 1581 aa14.35□□□□□ -0.11
AL049839.2-201ENST00000553947 PEG3Q9GZU2 1588 aa14.34□□□□□ -0.11
AL049839.2-201ENST00000553947 SCAF1Q9H7N4 1312 aaKnown RBP14.28□□□□□ -0.12
AL049839.2-201ENST00000553947 ATAD2BQ9ULI0 1458 aa14.28□□□□□ -0.12
AL049839.2-201ENST00000553947 AEBP2Q6ZN18 517 aaPredicted RBP14.23□□□□□ -0.13
AL049839.2-201ENST00000553947 TRIM26Q12899 539 aaPredicted RBP14.22□□□□□ -0.13
AL049839.2-201ENST00000553947 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.14
AL049839.2-201ENST00000553947 SOGA1O94964 1423 aa14.17□□□□□ -0.14
AL049839.2-201ENST00000553947 RUSC2Q8N2Y8 1516 aa14.13□□□□□ -0.15
AL049839.2-201ENST00000553947 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
AL049839.2-201ENST00000553947 SYNJ1O43426 1573 aa14.08□□□□□ -0.16
AL049839.2-201ENST00000553947 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
AL049839.2-201ENST00000553947 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
AL049839.2-201ENST00000553947 EEA1Q15075 1411 aa14.02□□□□□ -0.16
AL049839.2-201ENST00000553947 HMGXB3Q12766 1538 aa14.01□□□□□ -0.17
AL049839.2-201ENST00000553947 CEP162Q5TB80 1403 aa13.99□□□□□ -0.17
AL049839.2-201ENST00000553947 TNIKQ9UKE5 1360 aa13.98□□□□□ -0.17
AL049839.2-201ENST00000553947 UBTFP17480 764 aaKnown RBP13.95□□□□□ -0.18
AL049839.2-201ENST00000553947 GOLGA3Q08378 1498 aa13.93□□□□□ -0.18
AL049839.2-201ENST00000553947 TOP2BQ02880 1626 aa13.91□□□□□ -0.18
AL049839.2-201ENST00000553947 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
AL049839.2-201ENST00000553947 KIF21BO75037 1637 aa13.87□□□□□ -0.19
AL049839.2-201ENST00000553947 BIVM-ERCC5R4GMW8 1640 aa13.87□□□□□ -0.19
AL049839.2-201ENST00000553947 CFTRP13569 1480 aa13.86□□□□□ -0.19
AL049839.2-201ENST00000553947 TTBK1Q5TCY1 1321 aaPredicted RBP13.86□□□□□ -0.19
AL049839.2-201ENST00000553947 ZEB1P37275 1124 aaPredicted RBP13.84□□□□□ -0.19
AL049839.2-201ENST00000553947 CUX1P39880 1505 aa13.84□□□□□ -0.19
AL049839.2-201ENST00000553947 ACIN1Q9UKV3 1341 aaKnown RBP13.83□□□□□ -0.2
AL049839.2-201ENST00000553947 RAPGEF2Q9Y4G8 1499 aa13.83□□□□□ -0.2
AL049839.2-201ENST00000553947 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
AL049839.2-201ENST00000553947 CC2D2AQ9P2K1 1620 aa13.8□□□□□ -0.2
AL049839.2-201ENST00000553947 NEUROD1Q13562 356 aa13.79□□□□□ -0.2
AL049839.2-201ENST00000553947 CLIP1P30622 1438 aa13.77□□□□□ -0.21
AL049839.2-201ENST00000553947 CADPSQ9ULU8 1353 aa13.74□□□□□ -0.21
AL049839.2-201ENST00000553947 RANGAP1P46060 587 aaPredicted RBP13.74□□□□□ -0.21
AL049839.2-201ENST00000553947 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
AL049839.2-201ENST00000553947 PRXQ9BXM0 1461 aa13.73□□□□□ -0.21
AL049839.2-201ENST00000553947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
AL049839.2-201ENST00000553947 CENPBP07199 599 aaPredicted RBP13.71□□□□□ -0.22
AL049839.2-201ENST00000553947 KIF27Q86VH2 1401 aa13.69□□□□□ -0.22
AL049839.2-201ENST00000553947 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
AL049839.2-201ENST00000553947 VPS8Q8N3P4 1428 aa13.68□□□□□ -0.22
AL049839.2-201ENST00000553947 CCER1Q8TC90 406 aaPredicted RBP13.64□□□□□ -0.23
AL049839.2-201ENST00000553947 CUX2O14529 1486 aa13.62□□□□□ -0.23
AL049839.2-201ENST00000553947 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
AL049839.2-201ENST00000553947 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
AL049839.2-201ENST00000553947 NESP48681 1621 aa13.6□□□□□ -0.23
AL049839.2-201ENST00000553947 ARAP1Q96P48 1450 aa13.59□□□□□ -0.23
AL049839.2-201ENST00000553947 IGF1RP08069 1367 aa13.59□□□□□ -0.23
AL049839.2-201ENST00000553947 APLP2Q06481 763 aa13.56□□□□□ -0.24
AL049839.2-201ENST00000553947 BCL11AQ9H165 835 aa13.55□□□□□ -0.24
AL049839.2-201ENST00000553947 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
AL049839.2-201ENST00000553947 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
AL049839.2-201ENST00000553947 ARHGAP35Q9NRY4 1499 aa13.52□□□□□ -0.25
AL049839.2-201ENST00000553947 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.25
AL049839.2-201ENST00000553947 CARMIL1Q5VZK9 1371 aa13.51□□□□□ -0.25
AL049839.2-201ENST00000553947 DNMBPQ6XZF7 1577 aa13.51□□□□□ -0.25
AL049839.2-201ENST00000553947 TOPBP1Q92547 1522 aa13.51□□□□□ -0.25
AL049839.2-201ENST00000553947 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
AL049839.2-201ENST00000553947 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
AL049839.2-201ENST00000553947 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
AL049839.2-201ENST00000553947 ABCA10Q8WWZ4 1543 aa13.45□□□□□ -0.26
AL049839.2-201ENST00000553947 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
AL049839.2-201ENST00000553947 DIEXFQ68CQ4 756 aaKnown RBP13.44□□□□□ -0.26
AL049839.2-201ENST00000553947 YTHDC1Q96MU7 727 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms