Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 AC137767.1-201ENST00000602918 1920 ntBASIC23.21■■□□□ 1.31
RNF169Q8NCN4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 AP006587.3-201ENST00000525742 1516 ntBASIC23.21■■□□□ 1.31
RNF169Q8NCN4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF169Q8NCN4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 AC083906.2-201ENST00000511578 360 ntBASIC23.2■■□□□ 1.3
RNF169Q8NCN4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 AC138907.5-202ENST00000569484 235 ntBASIC23.2■■□□□ 1.3
RNF169Q8NCN4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.2■■□□□ 1.3
RNF169Q8NCN4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 AL121832.2-201ENST00000610979 668 ntBASIC23.19■■□□□ 1.3
RNF169Q8NCN4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF169Q8NCN4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 C9orf163-202ENST00000624034 2573 ntBASIC23.18■■□□□ 1.3
RNF169Q8NCN4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RNF169Q8NCN4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF169Q8NCN4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF169Q8NCN4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF169Q8NCN4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.16■■□□□ 1.3
RNF169Q8NCN4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.16■■□□□ 1.3
RNF169Q8NCN4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF169Q8NCN4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.16■■□□□ 1.3
RNF169Q8NCN4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF169Q8NCN4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.16■■□□□ 1.3
RNF169Q8NCN4 AC010536.3-201ENST00000620306 533 ntBASIC23.16■■□□□ 1.3
RNF169Q8NCN4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF169Q8NCN4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF169Q8NCN4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF169Q8NCN4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RNF169Q8NCN4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF169Q8NCN4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms