Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COLCA2A8K830 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
COLCA2A8K830 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA2A8K830 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA2A8K830 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA2A8K830 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA2A8K830 OXCT2P1-201ENST00000447263 1535 ntBASIC16.5■□□□□ 0.23
COLCA2A8K830 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA2A8K830 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA2A8K830 AC112907.3-201ENST00000577781 2400 ntBASIC16.49■□□□□ 0.23
COLCA2A8K830 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
COLCA2A8K830 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA2A8K830 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA2A8K830 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.49■□□□□ 0.23
COLCA2A8K830 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
COLCA2A8K830 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA2A8K830 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.49■□□□□ 0.23
COLCA2A8K830 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA2A8K830 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.49■□□□□ 0.23
COLCA2A8K830 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.48■□□□□ 0.23
COLCA2A8K830 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
COLCA2A8K830 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
COLCA2A8K830 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
COLCA2A8K830 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
COLCA2A8K830 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA2A8K830 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.47■□□□□ 0.23
COLCA2A8K830 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.47■□□□□ 0.23
COLCA2A8K830 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
COLCA2A8K830 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.47■□□□□ 0.23
COLCA2A8K830 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.47■□□□□ 0.23
COLCA2A8K830 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.47■□□□□ 0.23
COLCA2A8K830 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.47■□□□□ 0.23
COLCA2A8K830 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA2A8K830 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.46■□□□□ 0.23
COLCA2A8K830 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA2A8K830 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.46■□□□□ 0.23
COLCA2A8K830 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA2A8K830 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
COLCA2A8K830 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA2A8K830 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA2A8K830 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
COLCA2A8K830 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
COLCA2A8K830 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA2A8K830 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COLCA2A8K830 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC16.46■□□□□ 0.23
COLCA2A8K830 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA2A8K830 AC007613.1-201ENST00000572811 2597 ntBASIC16.46■□□□□ 0.23
COLCA2A8K830 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COLCA2A8K830 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA2A8K830 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA2A8K830 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.46■□□□□ 0.23
COLCA2A8K830 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
COLCA2A8K830 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
COLCA2A8K830 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.45■□□□□ 0.22
COLCA2A8K830 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.45■□□□□ 0.22
COLCA2A8K830 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.45■□□□□ 0.22
COLCA2A8K830 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
COLCA2A8K830 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.45■□□□□ 0.22
COLCA2A8K830 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA2A8K830 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
COLCA2A8K830 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA2A8K830 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
COLCA2A8K830 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA2A8K830 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
COLCA2A8K830 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA2A8K830 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms