Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PDE6DO43924 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6DO43924 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.59■□□□□ 0.25
PDE6DO43924 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6DO43924 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDE6DO43924 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDE6DO43924 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PDE6DO43924 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDE6DO43924 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6DO43924 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.58■□□□□ 0.24
PDE6DO43924 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.58■□□□□ 0.24
PDE6DO43924 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PDE6DO43924 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6DO43924 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PDE6DO43924 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PDE6DO43924 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6DO43924 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.58■□□□□ 0.24
PDE6DO43924 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PDE6DO43924 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6DO43924 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6DO43924 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.57■□□□□ 0.24
PDE6DO43924 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6DO43924 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6DO43924 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PDE6DO43924 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDE6DO43924 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6DO43924 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDE6DO43924 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.57■□□□□ 0.24
PDE6DO43924 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PDE6DO43924 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.57■□□□□ 0.24
PDE6DO43924 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.57■□□□□ 0.24
PDE6DO43924 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6DO43924 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6DO43924 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDE6DO43924 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.57■□□□□ 0.24
PDE6DO43924 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.57■□□□□ 0.24
PDE6DO43924 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDE6DO43924 AC022616.5-201ENST00000518796 181 ntBASIC16.57■□□□□ 0.24
PDE6DO43924 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PDE6DO43924 MIR6765-201ENST00000614092 87 ntBASIC16.57■□□□□ 0.24
PDE6DO43924 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.57■□□□□ 0.24
PDE6DO43924 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6DO43924 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6DO43924 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDE6DO43924 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6DO43924 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6DO43924 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6DO43924 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6DO43924 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.56■□□□□ 0.24
PDE6DO43924 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6DO43924 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6DO43924 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6DO43924 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PDE6DO43924 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.56■□□□□ 0.24
PDE6DO43924 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6DO43924 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PDE6DO43924 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.56■□□□□ 0.24
PDE6DO43924 RPS2P35-201ENST00000443417 897 ntBASIC16.56■□□□□ 0.24
PDE6DO43924 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.56■□□□□ 0.24
PDE6DO43924 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6DO43924 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6DO43924 GABARAPL3-202ENST00000624044 1851 ntBASIC16.56■□□□□ 0.24
PDE6DO43924 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6DO43924 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.56■□□□□ 0.24
PDE6DO43924 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6DO43924 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6DO43924 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6DO43924 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PDE6DO43924 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PDE6DO43924 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PDE6DO43924 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.55■□□□□ 0.24
PDE6DO43924 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
PDE6DO43924 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PDE6DO43924 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.55■□□□□ 0.24
PDE6DO43924 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PDE6DO43924 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6DO43924 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.55■□□□□ 0.24
PDE6DO43924 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.55■□□□□ 0.24
PDE6DO43924 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.55■□□□□ 0.24
PDE6DO43924 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PDE6DO43924 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.54■□□□□ 0.24
PDE6DO43924 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6DO43924 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6DO43924 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6DO43924 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6DO43924 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms