RNA–Protein interactions for RNA: ENST00000329198.4

NKX2-5-201, Transcript of NK2 homeobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-5, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5-201ENST00000329198 NISCHQ9Y2I1 1504 aa50.87■■■■■ 5.73
NKX2-5-201ENST00000329198 CCDC180Q9P1Z9 1646 aa45.18■■■■■ 4.82
NKX2-5-201ENST00000329198 ABCC9O60706 1549 aa44.27■■■■■ 4.68
NKX2-5-201ENST00000329198 DCAF8L2P0C7V8 631 aa42.8■■■■■ 4.44
NKX2-5-201ENST00000329198 RB1CC1Q8TDY2 1594 aa42.52■■■■■ 4.4
NKX2-5-201ENST00000329198 NACADO15069 1562 aa42.43■■■■■ 4.38
NKX2-5-201ENST00000329198 ZCCHC6Q5VYS8 1495 aaKnown RBP42.38■■■■■ 4.37
NKX2-5-201ENST00000329198 MYO15BQ96JP2 1530 aa42.06■■■■■ 4.32
NKX2-5-201ENST00000329198 DCAF1Q9Y4B6 1507 aa41.97■■■■■ 4.31
NKX2-5-201ENST00000329198 UNC13AQ9UPW8 1703 aa41.63■■■■■ 4.25
NKX2-5-201ENST00000329198 PABPN1Q86U42 306 aaKnown RBP eCLIP41.41■■■■■ 4.22
NKX2-5-201ENST00000329198 SCRIBQ14160 1630 aa41.41■■■■■ 4.22
NKX2-5-201ENST00000329198 BICRAQ9NZM4 1560 aa41.18■■■■■ 4.18
NKX2-5-201ENST00000329198 SHROOM4Q9ULL8 1493 aa40.63■■■■■ 4.09
NKX2-5-201ENST00000329198 DNAJC5BQ9UF47 199 aa40.45■■■■■ 4.07
NKX2-5-201ENST00000329198 EIF4G1Q04637 1599 aaKnown RBP40.14■■■■■ 4.02
NKX2-5-201ENST00000329198 CC2D2AQ9P2K1 1620 aa39.99■■■■□ 3.99
NKX2-5-201ENST00000329198 CECR2Q9BXF3 1484 aa39.7■■■■□ 3.95
NKX2-5-201ENST00000329198 SMARCA4P51532 1647 aa39.51■■■■□ 3.91
NKX2-5-201ENST00000329198 BAZ1AQ9NRL2 1556 aaPredicted RBP39.45■■■■□ 3.91
NKX2-5-201ENST00000329198 MROH2BQ7Z745 1585 aa39.26■■■■□ 3.87
NKX2-5-201ENST00000329198 ATAD2BQ9ULI0 1458 aa39.21■■■■□ 3.87
NKX2-5-201ENST00000329198 SMARCA2P51531 1590 aa39.19■■■■□ 3.86
NKX2-5-201ENST00000329198 NCAPD3P42695 1498 aa39.11■■■■□ 3.85
NKX2-5-201ENST00000329198 BAZ1BQ9UIG0 1483 aaKnown RBP38.99■■■■□ 3.83
NKX2-5-201ENST00000329198 PEG3Q9GZU2 1588 aa38.98■■■■□ 3.83
NKX2-5-201ENST00000329198 HMGXB3Q12766 1538 aa38.97■■■■□ 3.83
NKX2-5-201ENST00000329198 WIZO95785 1651 aa38.92■■■■□ 3.82
NKX2-5-201ENST00000329198 RSF1Q96T23 1441 aaPredicted RBP38.81■■■■□ 3.8
NKX2-5-201ENST00000329198 TOP2AP11388 1531 aaKnown RBP38.42■■■■□ 3.74
NKX2-5-201ENST00000329198 SUPT5HO00267 1087 aaKnown RBP38.37■■■■□ 3.73
NKX2-5-201ENST00000329198 NESP48681 1621 aa38.32■■■■□ 3.72
NKX2-5-201ENST00000329198 ERCC6Q03468 1493 aa38.19■■■■□ 3.7
NKX2-5-201ENST00000329198 LAMC3Q9Y6N6 1575 aa38.13■■■■□ 3.69
NKX2-5-201ENST00000329198 CADPSQ9ULU8 1353 aa38.04■■■■□ 3.68
NKX2-5-201ENST00000329198 CCDC88BA6NC98 1476 aa37.98■■■■□ 3.67
NKX2-5-201ENST00000329198 PDS5BQ9NTI5 1447 aa37.9■■■■□ 3.66
NKX2-5-201ENST00000329198 KIF21AQ7Z4S6 1674 aa37.9■■■■□ 3.66
NKX2-5-201ENST00000329198 CFTRP13569 1480 aa37.8■■■■□ 3.64
NKX2-5-201ENST00000329198 FANCD2Q9BXW9 1451 aa37.67■■■■□ 3.62
NKX2-5-201ENST00000329198 PRDM2Q13029 1718 aa37.65■■■■□ 3.62
NKX2-5-201ENST00000329198 THOC2Q8NI27 1593 aaKnown RBP37.64■■■■□ 3.62
NKX2-5-201ENST00000329198 CEP164Q9UPV0 1460 aa37.63■■■■□ 3.61
NKX2-5-201ENST00000329198 CUX2O14529 1486 aa37.56■■■■□ 3.6
NKX2-5-201ENST00000329198 MRC2Q9UBG0 1479 aa37.52■■■■□ 3.6
NKX2-5-201ENST00000329198 WDR62O43379 1518 aa37.34■■■■□ 3.57
NKX2-5-201ENST00000329198 URB2Q14146 1524 aaKnown RBP37.27■■■■□ 3.56
NKX2-5-201ENST00000329198 TOPBP1Q92547 1522 aa37.07■■■■□ 3.52
NKX2-5-201ENST00000329198 DNMBPQ6XZF7 1577 aa37.03■■■■□ 3.52
NKX2-5-201ENST00000329198 ABCC8Q09428 1581 aa37■■■■□ 3.51
NKX2-5-201ENST00000329198 CUX1P39880 1505 aa36.82■■■■□ 3.49
NKX2-5-201ENST00000329198 IFT140Q96RY7 1462 aa36.78■■■■□ 3.48
NKX2-5-201ENST00000329198 POLA1P09884 1462 aaPredicted RBP36.75■■■■□ 3.47
NKX2-5-201ENST00000329198 FGD5Q6ZNL6 1462 aa36.72■■■■□ 3.47
NKX2-5-201ENST00000329198 CHIC1Q5VXU3 224 aa36.7■■■■□ 3.47
NKX2-5-201ENST00000329198 ZNF608Q9ULD9 1512 aaPredicted RBP36.66■■■■□ 3.46
NKX2-5-201ENST00000329198 RAD54L2Q9Y4B4 1467 aa36.65■■■■□ 3.46
NKX2-5-201ENST00000329198 WRNQ14191 1432 aaPredicted RBP eCLIP36.64■■■■□ 3.46
NKX2-5-201ENST00000329198 SOGA1O94964 1423 aa36.63■■■■□ 3.45
NKX2-5-201ENST00000329198 TARBP1Q13395 1621 aaKnown RBP36.62■■■■□ 3.45
NKX2-5-201ENST00000329198 SYNJ1O43426 1573 aa36.57■■■■□ 3.44
NKX2-5-201ENST00000329198 EIF4G3O43432 1585 aaKnown RBP36.54■■■■□ 3.44
NKX2-5-201ENST00000329198 TOP2BQ02880 1626 aa36.52■■■■□ 3.44
NKX2-5-201ENST00000329198 BIVM-ERCC5R4GMW8 1640 aa36.51■■■■□ 3.44
NKX2-5-201ENST00000329198 AQRO60306 1485 aaKnown RBP eCLIP36.49■■■■□ 3.43
NKX2-5-201ENST00000329198 TDRD9Q8NDG6 1382 aaKnown RBP36.46■■■■□ 3.43
NKX2-5-201ENST00000329198 WDR97A6NE52 1622 aa36.36■■■■□ 3.41
NKX2-5-201ENST00000329198 DNAJC5Q9H3Z4 198 aa36.31■■■■□ 3.4
NKX2-5-201ENST00000329198 ABCA10Q8WWZ4 1543 aa36.29■■■■□ 3.4
NKX2-5-201ENST00000329198 GAPVD1Q14C86 1478 aa36.21■■■■□ 3.39
NKX2-5-201ENST00000329198 FBLN2P98095 1184 aa36.2■■■■□ 3.38
NKX2-5-201ENST00000329198 PBRM1Q86U86 1689 aa36.19■■■■□ 3.38
NKX2-5-201ENST00000329198 GRIN2BQ13224 1484 aa36.16■■■■□ 3.38
NKX2-5-201ENST00000329198 ABCA5Q8WWZ7 1642 aa36.16■■■■□ 3.38
NKX2-5-201ENST00000329198 SNAPC4Q5SXM2 1469 aa36.15■■■■□ 3.38
NKX2-5-201ENST00000329198 TRIM41Q8WV44 630 aa36.14■■■■□ 3.38
NKX2-5-201ENST00000329198 CHD1O14646 1710 aa36.12■■■■□ 3.37
NKX2-5-201ENST00000329198 OSCARQ8IYS5 282 aa36.11■■■■□ 3.37
NKX2-5-201ENST00000329198 MAGI1Q96QZ7 1491 aaPredicted RBP36.03■■■■□ 3.36
NKX2-5-201ENST00000329198 CHMP7Q8WUX9 453 aaPredicted RBP36■■■■□ 3.35
NKX2-5-201ENST00000329198 SYNJ2O15056 1496 aa35.91■■■■□ 3.34
NKX2-5-201ENST00000329198 KIF27Q86VH2 1401 aa35.87■■■■□ 3.33
NKX2-5-201ENST00000329198 ERICH3Q5RHP9 1530 aa35.86■■■■□ 3.33
NKX2-5-201ENST00000329198 ADAMTS12P58397 1594 aa35.83■■■■□ 3.33
NKX2-5-201ENST00000329198 FHAD1B1AJZ9 1412 aa35.75■■■■□ 3.31
NKX2-5-201ENST00000329198 GRIN2AQ12879 1464 aa35.71■■■■□ 3.31
NKX2-5-201ENST00000329198 IGF1RP08069 1367 aa35.65■■■■□ 3.3
NKX2-5-201ENST00000329198 RUSC2Q8N2Y8 1516 aa35.62■■■■□ 3.29
NKX2-5-201ENST00000329198 CUL7Q14999 1698 aa35.61■■■■□ 3.29
NKX2-5-201ENST00000329198 CLASP1Q7Z460 1538 aa35.58■■■■□ 3.29
NKX2-5-201ENST00000329198 RIMBP3CA6NJZ7 1639 aa35.55■■■■□ 3.28
NKX2-5-201ENST00000329198 RIMBP3BA6NNM3 1639 aa35.55■■■■□ 3.28
NKX2-5-201ENST00000329198 RIMBP3Q9UFD9 1639 aa35.55■■■■□ 3.28
NKX2-5-201ENST00000329198 CEP170Q5SW79 1584 aa35.54■■■■□ 3.28
NKX2-5-201ENST00000329198 ARHGEF11O15085 1522 aa35.52■■■■□ 3.28
NKX2-5-201ENST00000329198 CARMIL1Q5VZK9 1371 aa35.5■■■■□ 3.27
NKX2-5-201ENST00000329198 NUP160Q12769 1436 aa35.46■■■■□ 3.27
NKX2-5-201ENST00000329198 FAM9AQ8IZU1 332 aaPredicted RBP35.4■■■■□ 3.26
NKX2-5-201ENST00000329198 EEA1Q15075 1411 aa35.39■■■■□ 3.26
NKX2-5-201ENST00000329198 RAPGEF2Q9Y4G8 1499 aa35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms