Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.57□□□□□ -1.842e-6■■■■□ 23.1
CSTF2TQ9H0L4 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.772e-6■■■■□ 23
CSTF2TQ9H0L4 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.012e-6■■■■□ 23
CSTF2TQ9H0L4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.42e-6■■■■□ 23
CSTF2TQ9H0L4 KRTAP5-AS1-204ENST00000534077 409 ntTSL 317.44■□□□□ 0.381e-7■■■■□ 23
CSTF2TQ9H0L4 IMPDH1-213ENST00000491376 748 ntTSL 418.28■□□□□ 0.528e-7■■■■□ 23
CSTF2TQ9H0L4 IMPDH1-209ENST00000473463 590 ntTSL 218.28■□□□□ 0.528e-7■■■■□ 23
CSTF2TQ9H0L4 IMPDH1-216ENST00000497868 952 ntTSL 515.75■□□□□ 0.118e-7■■■■□ 23
CSTF2TQ9H0L4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.3□□□□□ -0.128e-7■■■■□ 23
CSTF2TQ9H0L4 IMPDH1-212ENST00000489263 598 ntTSL 314.27□□□□□ -0.138e-7■■■■□ 23
CSTF2TQ9H0L4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.2□□□□□ -0.148e-7■■■■□ 23
CSTF2TQ9H0L4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.6□□□□□ -0.238e-7■■■■□ 23
CSTF2TQ9H0L4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.248e-7■■■■□ 23
CSTF2TQ9H0L4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.52□□□□□ -0.248e-7■■■■□ 23
CSTF2TQ9H0L4 IMPDH1-211ENST00000484496 2422 ntTSL 512.67□□□□□ -0.388e-7■■■■□ 23
CSTF2TQ9H0L4 RASA2-207ENST00000515549 494 ntTSL 416.91■□□□□ 0.32e-8■■■■□ 23
CSTF2TQ9H0L4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.062e-8■■■■□ 23
CSTF2TQ9H0L4 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.142e-8■■■■□ 23
CSTF2TQ9H0L4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.212e-6■■■■□ 23
CSTF2TQ9H0L4 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.573e-7■■■■□ 23
CSTF2TQ9H0L4 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.261e-6■■■■□ 23
CSTF2TQ9H0L4 BAHCC1-204ENST00000583828 591 ntTSL 317.9■□□□□ 0.463e-7■■■■□ 23
CSTF2TQ9H0L4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.611e-7■■■■□ 23
CSTF2TQ9H0L4 SH3BP2-223ENST00000512131 615 ntTSL 216.01■□□□□ 0.151e-7■■■■□ 23
CSTF2TQ9H0L4 SH3BP2-206ENST00000503219 551 ntTSL 415.16■□□□□ 0.021e-7■■■■□ 23
CSTF2TQ9H0L4 RIPOR1-218ENST00000566920 584 ntTSL 416.61■□□□□ 0.252e-6■■■■□ 23
CSTF2TQ9H0L4 RIPOR1-203ENST00000422602 3990 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.772e-6■■■■□ 23
CSTF2TQ9H0L4 PTBP2-209ENST00000482253 2029 ntTSL 216.9■□□□□ 0.31e-6■■■■□ 23
CSTF2TQ9H0L4 PTBP2-205ENST00000460706 1129 ntTSL 211.01□□□□□ -0.651e-6■■■■□ 23
CSTF2TQ9H0L4 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.071e-6■■■■□ 23
CSTF2TQ9H0L4 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.141e-6■■■■□ 23
CSTF2TQ9H0L4 PTBP2-207ENST00000476419 1691 ntTSL 1 (best)7.91□□□□□ -1.141e-6■■■■□ 23
CSTF2TQ9H0L4 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.161e-6■■■■□ 23
CSTF2TQ9H0L4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.91e-6■■■■□ 23
CSTF2TQ9H0L4 ZNF627-203ENST00000587939 591 ntTSL 412.95□□□□□ -0.341e-6■■■■□ 23
CSTF2TQ9H0L4 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.581e-6■■■■□ 23
CSTF2TQ9H0L4 ZNF627-204ENST00000588174 2755 ntTSL 2 BASIC10.47□□□□□ -0.731e-6■■■■□ 23
CSTF2TQ9H0L4 ZNF627-202ENST00000585493 541 ntTSL 48.16□□□□□ -1.11e-6■■■■□ 23
CSTF2TQ9H0L4 PRMT1-216ENST00000530361 866 ntTSL 316.35■□□□□ 0.214e-8■■■■□ 23
CSTF2TQ9H0L4 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC12.11□□□□□ -0.474e-7■■■■□ 23
CSTF2TQ9H0L4 PRDM2-214ENST00000505823 568 ntTSL 1 (best) BASIC11.33□□□□□ -0.64e-7■■■■□ 23
CSTF2TQ9H0L4 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC11.18□□□□□ -0.624e-7■■■■□ 23
CSTF2TQ9H0L4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.214e-7■■■■□ 23
CSTF2TQ9H0L4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.37■□□□□ 0.536e-7■■■■□ 22.9
CSTF2TQ9H0L4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.26e-7■■■■□ 22.9
CSTF2TQ9H0L4 RPH3AL-221ENST00000577079 814 ntAPPRIS ALT2 TSL 315.78■□□□□ 0.126e-7■■■■□ 22.9
CSTF2TQ9H0L4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.18□□□□□ -0.146e-7■■■■□ 22.9
CSTF2TQ9H0L4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.196e-7■■■■□ 22.9
CSTF2TQ9H0L4 SIN3A-214ENST00000570115 554 ntTSL 410.49□□□□□ -0.732e-7■■■■□ 22.9
CSTF2TQ9H0L4 SIN3A-204ENST00000562776 590 ntTSL 410.23□□□□□ -0.772e-7■■■■□ 22.9
CSTF2TQ9H0L4 SIN3A-201ENST00000360439 5050 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.892e-7■■■■□ 22.9
CSTF2TQ9H0L4 SIN3A-205ENST00000564778 617 ntTSL 28.94□□□□□ -0.982e-7■■■■□ 22.9
CSTF2TQ9H0L4 SIN3A-210ENST00000568309 549 ntTSL 47.64□□□□□ -1.192e-7■■■■□ 22.9
CSTF2TQ9H0L4 SIN3A-209ENST00000568190 567 ntTSL 47.63□□□□□ -1.192e-7■■■■□ 22.9
CSTF2TQ9H0L4 SIN3A-211ENST00000568431 565 ntTSL 57.12□□□□□ -1.272e-7■■■■□ 22.9
CSTF2TQ9H0L4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.35■■□□□ 1.492e-13■■■■□ 22.9
CSTF2TQ9H0L4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.482e-13■■■■□ 22.9
CSTF2TQ9H0L4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.28■■□□□ 1.482e-13■■■■□ 22.9
CSTF2TQ9H0L4 FTCD-212ENST00000498355 1936 ntTSL 223.79■■□□□ 1.42e-13■■■■□ 22.9
CSTF2TQ9H0L4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.212e-13■■■■□ 22.9
CSTF2TQ9H0L4 CTSD-205ENST00000438213 946 ntTSL 215.28■□□□□ 0.041e-6■■■■□ 22.9
CSTF2TQ9H0L4 C7orf50-206ENST00000465681 2621 ntTSL 1 (best)14.96□□□□□ -0.011e-7■■■■□ 22.9
CSTF2TQ9H0L4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.578e-7■■■■□ 22.9
CSTF2TQ9H0L4 C2CD2-208ENST00000490479 761 ntTSL 311.26□□□□□ -0.618e-7■■■■□ 22.9
CSTF2TQ9H0L4 PCGF3-209ENST00000475288 604 ntTSL 316.93■□□□□ 0.36e-7■■■■□ 22.9
CSTF2TQ9H0L4 MAEA-203ENST00000502558 570 ntTSL 215.71■□□□□ 0.118e-7■■■■□ 22.9
CSTF2TQ9H0L4 MAEA-205ENST00000503653 845 ntTSL 312.14□□□□□ -0.478e-7■■■■□ 22.9
CSTF2TQ9H0L4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.091e-6■■■■□ 22.9
CSTF2TQ9H0L4 DCAF15-206ENST00000591802 506 ntTSL 315.9■□□□□ 0.141e-6■■■■□ 22.9
CSTF2TQ9H0L4 AKT1-204ENST00000544168 1564 ntTSL 215.64■□□□□ 0.096e-7■■■■□ 22.9
CSTF2TQ9H0L4 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.631e-6■■■■□ 22.9
CSTF2TQ9H0L4 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -11e-6■■■■□ 22.9
CSTF2TQ9H0L4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.22□□□□□ -1.571e-6■■■■□ 22.9
CSTF2TQ9H0L4 HMGB1-207ENST00000468384 503 ntTSL 1 (best)5.07□□□□□ -1.61e-6■■■■□ 22.9
CSTF2TQ9H0L4 MIB2-209ENST00000477990 2821 ntTSL 212.88□□□□□ -0.352e-7■■■■□ 22.9
CSTF2TQ9H0L4 BCORL1-203ENST00000456822 5648 ntTSL 513.12□□□□□ -0.311e-13■■■■□ 22.9
CSTF2TQ9H0L4 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.521e-13■■■■□ 22.9
CSTF2TQ9H0L4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.04■□□□□ 0.963e-8■■■■□ 22.9
CSTF2TQ9H0L4 SH3BP2-219ENST00000511237 517 ntTSL 515.21■□□□□ 0.031e-7■■■■□ 22.9
CSTF2TQ9H0L4 SH3BP2-215ENST00000510074 649 ntTSL 515.21■□□□□ 0.031e-7■■■■□ 22.9
CSTF2TQ9H0L4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.347e-7■■■■□ 22.9
CSTF2TQ9H0L4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.572e-7■■■■□ 22.9
CSTF2TQ9H0L4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.39□□□□□ -0.112e-7■■■■□ 22.9
CSTF2TQ9H0L4 RAB11B-203ENST00000598706 574 ntTSL 213.51□□□□□ -0.252e-7■■■■□ 22.9
CSTF2TQ9H0L4 RAB11B-204ENST00000600719 532 ntTSL 413.43□□□□□ -0.262e-7■■■■□ 22.9
CSTF2TQ9H0L4 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC12.31□□□□□ -0.442e-7■■■■□ 22.9
CSTF2TQ9H0L4 FAR1-205ENST00000532701 1109 ntTSL 215.23■□□□□ 0.031e-8■■■■□ 22.9
CSTF2TQ9H0L4 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC12.09□□□□□ -0.471e-8■■■■□ 22.9
CSTF2TQ9H0L4 SH3BP2-212ENST00000508338 491 ntTSL 324.88■■□□□ 1.571e-6■■■■□ 22.9
CSTF2TQ9H0L4 INPPL1-214ENST00000543234 275 ntTSL 220.38■□□□□ 0.856e-10■■■■□ 22.9
CSTF2TQ9H0L4 TRAF4-211ENST00000478021 718 ntTSL 321.29■■□□□ 11e-8■■■■□ 22.9
CSTF2TQ9H0L4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.43□□□□□ -0.264e-7■■■■□ 22.8
CSTF2TQ9H0L4 ADORA2A-207ENST00000467385 549 ntTSL 49.67□□□□□ -0.861e-6■■■■□ 22.8
CSTF2TQ9H0L4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.136e-7■■■■□ 22.8
CSTF2TQ9H0L4 EXD3-211ENST00000490886 1123 ntTSL 517.79■□□□□ 0.448e-7■■■■□ 22.8
CSTF2TQ9H0L4 TMEM120A-202ENST00000431867 872 ntTSL 517.21■□□□□ 0.352e-6■■■■□ 22.8
CSTF2TQ9H0L4 TMEM120A-204ENST00000440632 1352 ntTSL 516.93■□□□□ 0.32e-6■■■■□ 22.8
CSTF2TQ9H0L4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.04■□□□□ -02e-6■■■■□ 22.8
CSTF2TQ9H0L4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.95□□□□□ -0.022e-6■■■■□ 22.8
CSTF2TQ9H0L4 TMEM120A-211ENST00000485200 590 ntTSL 39.18□□□□□ -0.942e-6■■■■□ 22.8
Retrieved 100 of 19,151 protein–RNA pairs in 161.1 ms