RNA–Protein interactions for RNA: ENST00000490479.1

C2CD2-208, Transcript of C2 calcium dependent domain containing 2, humanhuman

TSL 3

Gene C2CD2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD2-208ENST00000490479 NISCHQ9Y2I1 1504 aa30.23■■■□□ 2.43
C2CD2-208ENST00000490479 ABCC9O60706 1549 aa27.72■■■□□ 2.03
C2CD2-208ENST00000490479 CCDC180Q9P1Z9 1646 aa27.24■■□□□ 1.95
C2CD2-208ENST00000490479 DNAJC5BQ9UF47 199 aa26.44■■□□□ 1.82
C2CD2-208ENST00000490479 RB1CC1Q8TDY2 1594 aa26.11■■□□□ 1.77
C2CD2-208ENST00000490479 NACADO15069 1562 aa25.82■■□□□ 1.72
C2CD2-208ENST00000490479 PABPN1Q86U42 306 aaKnown RBP eCLIP25.78■■□□□ 1.72
C2CD2-208ENST00000490479 DCAF8L2P0C7V8 631 aa25.71■■□□□ 1.71
C2CD2-208ENST00000490479 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
C2CD2-208ENST00000490479 BICRAQ9NZM4 1560 aa25.49■■□□□ 1.67
C2CD2-208ENST00000490479 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
C2CD2-208ENST00000490479 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
C2CD2-208ENST00000490479 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
C2CD2-208ENST00000490479 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
C2CD2-208ENST00000490479 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
C2CD2-208ENST00000490479 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
C2CD2-208ENST00000490479 SHROOM4Q9ULL8 1493 aa24.88■■□□□ 1.57
C2CD2-208ENST00000490479 DCAF1Q9Y4B6 1507 aa24.86■■□□□ 1.57
C2CD2-208ENST00000490479 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
C2CD2-208ENST00000490479 DNAJC5Q9H3Z4 198 aa24.41■■□□□ 1.5
C2CD2-208ENST00000490479 CUX2O14529 1486 aa23.92■■□□□ 1.42
C2CD2-208ENST00000490479 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
C2CD2-208ENST00000490479 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
C2CD2-208ENST00000490479 ATAD2BQ9ULI0 1458 aa23.79■■□□□ 1.4
C2CD2-208ENST00000490479 NESP48681 1621 aa23.75■■□□□ 1.39
C2CD2-208ENST00000490479 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
C2CD2-208ENST00000490479 HMGXB3Q12766 1538 aa23.64■■□□□ 1.38
C2CD2-208ENST00000490479 SMARCA2P51531 1590 aa23.63■■□□□ 1.37
C2CD2-208ENST00000490479 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
C2CD2-208ENST00000490479 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
C2CD2-208ENST00000490479 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
C2CD2-208ENST00000490479 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
C2CD2-208ENST00000490479 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
C2CD2-208ENST00000490479 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
C2CD2-208ENST00000490479 LAMC3Q9Y6N6 1575 aa23.38■■□□□ 1.33
C2CD2-208ENST00000490479 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
C2CD2-208ENST00000490479 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
C2CD2-208ENST00000490479 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
C2CD2-208ENST00000490479 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.29
C2CD2-208ENST00000490479 MRC2Q9UBG0 1479 aa23.11■■□□□ 1.29
C2CD2-208ENST00000490479 WIZO95785 1651 aa23.08■■□□□ 1.29
C2CD2-208ENST00000490479 WDR62O43379 1518 aa23.08■■□□□ 1.28
C2CD2-208ENST00000490479 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
C2CD2-208ENST00000490479 FANCD2Q9BXW9 1451 aa22.9■■□□□ 1.26
C2CD2-208ENST00000490479 CFTRP13569 1480 aa22.8■■□□□ 1.24
C2CD2-208ENST00000490479 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
C2CD2-208ENST00000490479 OSCARQ8IYS5 282 aa22.79■■□□□ 1.24
C2CD2-208ENST00000490479 RSF1Q96T23 1441 aaPredicted RBP22.69■■□□□ 1.22
C2CD2-208ENST00000490479 TOP2AP11388 1531 aaKnown RBP22.67■■□□□ 1.22
C2CD2-208ENST00000490479 RIMBP3CA6NJZ7 1639 aa22.63■■□□□ 1.21
C2CD2-208ENST00000490479 RIMBP3BA6NNM3 1639 aa22.63■■□□□ 1.21
C2CD2-208ENST00000490479 RIMBP3Q9UFD9 1639 aa22.63■■□□□ 1.21
C2CD2-208ENST00000490479 ZNF608Q9ULD9 1512 aaPredicted RBP22.59■■□□□ 1.21
C2CD2-208ENST00000490479 PRDM2Q13029 1718 aa22.57■■□□□ 1.2
C2CD2-208ENST00000490479 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
C2CD2-208ENST00000490479 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
C2CD2-208ENST00000490479 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
C2CD2-208ENST00000490479 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
C2CD2-208ENST00000490479 EIF4G3O43432 1585 aaKnown RBP22.4■■□□□ 1.18
C2CD2-208ENST00000490479 CYB5RLQ6IPT4 315 aa22.35■■□□□ 1.17
C2CD2-208ENST00000490479 CHD1O14646 1710 aa22.34■■□□□ 1.17
C2CD2-208ENST00000490479 AQRO60306 1485 aaKnown RBP eCLIP22.32■■□□□ 1.16
C2CD2-208ENST00000490479 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
C2CD2-208ENST00000490479 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
C2CD2-208ENST00000490479 ARAP1Q96P48 1450 aa22.26■■□□□ 1.15
C2CD2-208ENST00000490479 ABCC8Q09428 1581 aa22.24■■□□□ 1.15
C2CD2-208ENST00000490479 FBLN2P98095 1184 aa22.2■■□□□ 1.14
C2CD2-208ENST00000490479 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
C2CD2-208ENST00000490479 POLA1P09884 1462 aaPredicted RBP22.18■■□□□ 1.14
C2CD2-208ENST00000490479 RAD54L2Q9Y4B4 1467 aa22.17■■□□□ 1.14
C2CD2-208ENST00000490479 TDRD9Q8NDG6 1382 aaKnown RBP22.11■■□□□ 1.13
C2CD2-208ENST00000490479 SOGA1O94964 1423 aa22.06■■□□□ 1.12
C2CD2-208ENST00000490479 SNAPC4Q5SXM2 1469 aa22.04■■□□□ 1.12
C2CD2-208ENST00000490479 CLASP1Q7Z460 1538 aa22.04■■□□□ 1.12
C2CD2-208ENST00000490479 FGD5Q6ZNL6 1462 aa22■■□□□ 1.11
C2CD2-208ENST00000490479 CUX1P39880 1505 aa21.96■■□□□ 1.11
C2CD2-208ENST00000490479 CHMP7Q8WUX9 453 aaPredicted RBP21.93■■□□□ 1.1
C2CD2-208ENST00000490479 SYNJ1O43426 1573 aa21.91■■□□□ 1.1
C2CD2-208ENST00000490479 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
C2CD2-208ENST00000490479 WDR97A6NE52 1622 aa21.89■■□□□ 1.09
C2CD2-208ENST00000490479 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
C2CD2-208ENST00000490479 SYNJ2O15056 1496 aa21.85■■□□□ 1.09
C2CD2-208ENST00000490479 PBRM1Q86U86 1689 aa21.85■■□□□ 1.09
C2CD2-208ENST00000490479 GAPVD1Q14C86 1478 aa21.8■■□□□ 1.08
C2CD2-208ENST00000490479 ERCC6L2Q5T890 1561 aa21.77■■□□□ 1.08
C2CD2-208ENST00000490479 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
C2CD2-208ENST00000490479 ABCA10Q8WWZ4 1543 aa21.69■■□□□ 1.06
C2CD2-208ENST00000490479 CEP170Q5SW79 1584 aa21.63■■□□□ 1.05
C2CD2-208ENST00000490479 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
C2CD2-208ENST00000490479 ADAMTS12P58397 1594 aa21.59■■□□□ 1.05
C2CD2-208ENST00000490479 NUP160Q12769 1436 aa21.56■■□□□ 1.04
C2CD2-208ENST00000490479 SENP3Q9H4L4 574 aaPredicted RBP21.55■■□□□ 1.04
C2CD2-208ENST00000490479 SHROOM2Q13796 1616 aa21.54■■□□□ 1.04
C2CD2-208ENST00000490479 KIF13AQ9H1H9 1805 aa21.52■■□□□ 1.04
C2CD2-208ENST00000490479 WRNQ14191 1432 aaPredicted RBP eCLIP21.49■■□□□ 1.03
C2CD2-208ENST00000490479 BIVM-ERCC5R4GMW8 1640 aa21.46■■□□□ 1.03
C2CD2-208ENST00000490479 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
C2CD2-208ENST00000490479 TOP2BQ02880 1626 aa21.44■■□□□ 1.02
C2CD2-208ENST00000490479 SUPT5HO00267 1087 aaKnown RBP21.43■■□□□ 1.02
C2CD2-208ENST00000490479 PRG4Q92954 1404 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms