RNA–Protein interactions for RNA: ENST00000568431.5

SIN3A-211, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 5

Gene SIN3A, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-211ENST00000568431 NISCHQ9Y2I1 1504 aa19.29■□□□□ 0.68
SIN3A-211ENST00000568431 ABCC9O60706 1549 aa17.71■□□□□ 0.43
SIN3A-211ENST00000568431 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
SIN3A-211ENST00000568431 RB1CC1Q8TDY2 1594 aa16.79■□□□□ 0.28
SIN3A-211ENST00000568431 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
SIN3A-211ENST00000568431 UNC13AQ9UPW8 1703 aa16.64■□□□□ 0.25
SIN3A-211ENST00000568431 NACADO15069 1562 aa16.58■□□□□ 0.24
SIN3A-211ENST00000568431 BICRAQ9NZM4 1560 aa16.33■□□□□ 0.2
SIN3A-211ENST00000568431 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
SIN3A-211ENST00000568431 DCAF8L2P0C7V8 631 aa16.22■□□□□ 0.19
SIN3A-211ENST00000568431 MYO15BQ96JP2 1530 aa16.22■□□□□ 0.19
SIN3A-211ENST00000568431 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
SIN3A-211ENST00000568431 SHROOM4Q9ULL8 1493 aa16.04■□□□□ 0.16
SIN3A-211ENST00000568431 SCRIBQ14160 1630 aa15.98■□□□□ 0.15
SIN3A-211ENST00000568431 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
SIN3A-211ENST00000568431 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.14
SIN3A-211ENST00000568431 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
SIN3A-211ENST00000568431 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
SIN3A-211ENST00000568431 DNAJC5Q9H3Z4 198 aa15.53■□□□□ 0.08
SIN3A-211ENST00000568431 CUX2O14529 1486 aa15.39■□□□□ 0.05
SIN3A-211ENST00000568431 ERCC6Q03468 1493 aa15.31■□□□□ 0.04
SIN3A-211ENST00000568431 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
SIN3A-211ENST00000568431 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
SIN3A-211ENST00000568431 SMARCA4P51532 1647 aa15.21■□□□□ 0.02
SIN3A-211ENST00000568431 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
SIN3A-211ENST00000568431 SMARCA2P51531 1590 aa15.17■□□□□ 0.02
SIN3A-211ENST00000568431 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
SIN3A-211ENST00000568431 NESP48681 1621 aa15.14■□□□□ 0.01
SIN3A-211ENST00000568431 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
SIN3A-211ENST00000568431 LAMC3Q9Y6N6 1575 aa15.05■□□□□ -0
SIN3A-211ENST00000568431 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
SIN3A-211ENST00000568431 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
SIN3A-211ENST00000568431 PEG3Q9GZU2 1588 aa15.02■□□□□ -0
SIN3A-211ENST00000568431 MROH2BQ7Z745 1585 aa14.87□□□□□ -0.03
SIN3A-211ENST00000568431 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.03
SIN3A-211ENST00000568431 WDR62O43379 1518 aa14.83□□□□□ -0.04
SIN3A-211ENST00000568431 MRC2Q9UBG0 1479 aa14.81□□□□□ -0.04
SIN3A-211ENST00000568431 TRIM41Q8WV44 630 aa14.78□□□□□ -0.04
SIN3A-211ENST00000568431 WIZO95785 1651 aa14.77□□□□□ -0.04
SIN3A-211ENST00000568431 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.06
SIN3A-211ENST00000568431 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
SIN3A-211ENST00000568431 CEP164Q9UPV0 1460 aa14.69□□□□□ -0.06
SIN3A-211ENST00000568431 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
SIN3A-211ENST00000568431 RIMBP3CA6NJZ7 1639 aa14.57□□□□□ -0.08
SIN3A-211ENST00000568431 RIMBP3BA6NNM3 1639 aa14.57□□□□□ -0.08
SIN3A-211ENST00000568431 RIMBP3Q9UFD9 1639 aa14.57□□□□□ -0.08
SIN3A-211ENST00000568431 URB2Q14146 1524 aaKnown RBP14.55□□□□□ -0.08
SIN3A-211ENST00000568431 CFTRP13569 1480 aa14.54□□□□□ -0.08
SIN3A-211ENST00000568431 TOP2AP11388 1531 aaKnown RBP14.52□□□□□ -0.08
SIN3A-211ENST00000568431 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
SIN3A-211ENST00000568431 CHD1O14646 1710 aa14.46□□□□□ -0.1
SIN3A-211ENST00000568431 EIF4G3O43432 1585 aaKnown RBP14.44□□□□□ -0.1
SIN3A-211ENST00000568431 ARHGEF11O15085 1522 aa14.43□□□□□ -0.1
SIN3A-211ENST00000568431 ZNF608Q9ULD9 1512 aaPredicted RBP14.4□□□□□ -0.1
SIN3A-211ENST00000568431 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
SIN3A-211ENST00000568431 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
SIN3A-211ENST00000568431 TOPBP1Q92547 1522 aa14.34□□□□□ -0.11
SIN3A-211ENST00000568431 DNMBPQ6XZF7 1577 aa14.31□□□□□ -0.12
SIN3A-211ENST00000568431 TARBP1Q13395 1621 aaKnown RBP14.3□□□□□ -0.12
SIN3A-211ENST00000568431 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
SIN3A-211ENST00000568431 ARAP1Q96P48 1450 aa14.26□□□□□ -0.13
SIN3A-211ENST00000568431 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
SIN3A-211ENST00000568431 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.14
SIN3A-211ENST00000568431 POLA1P09884 1462 aaPredicted RBP14.17□□□□□ -0.14
SIN3A-211ENST00000568431 CYB5RLQ6IPT4 315 aa14.16□□□□□ -0.14
SIN3A-211ENST00000568431 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
SIN3A-211ENST00000568431 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
SIN3A-211ENST00000568431 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
SIN3A-211ENST00000568431 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
SIN3A-211ENST00000568431 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
SIN3A-211ENST00000568431 SNAPC4Q5SXM2 1469 aa14.1□□□□□ -0.15
SIN3A-211ENST00000568431 RAD54L2Q9Y4B4 1467 aa14.1□□□□□ -0.15
SIN3A-211ENST00000568431 FBLN2P98095 1184 aa14.07□□□□□ -0.16
SIN3A-211ENST00000568431 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
SIN3A-211ENST00000568431 MAGI1Q96QZ7 1491 aaPredicted RBP14.04□□□□□ -0.16
SIN3A-211ENST00000568431 CUX1P39880 1505 aa14.01□□□□□ -0.17
SIN3A-211ENST00000568431 SOGA1O94964 1423 aa14.01□□□□□ -0.17
SIN3A-211ENST00000568431 TDRD9Q8NDG6 1382 aaKnown RBP14.01□□□□□ -0.17
SIN3A-211ENST00000568431 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
SIN3A-211ENST00000568431 ABCA5Q8WWZ7 1642 aa13.98□□□□□ -0.17
SIN3A-211ENST00000568431 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
SIN3A-211ENST00000568431 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
SIN3A-211ENST00000568431 KIF13AQ9H1H9 1805 aa13.93□□□□□ -0.18
SIN3A-211ENST00000568431 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
SIN3A-211ENST00000568431 ERCC6L2Q5T890 1561 aa13.91□□□□□ -0.18
SIN3A-211ENST00000568431 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.18
SIN3A-211ENST00000568431 ADAMTS12P58397 1594 aa13.9□□□□□ -0.18
SIN3A-211ENST00000568431 CEP170Q5SW79 1584 aa13.87□□□□□ -0.19
SIN3A-211ENST00000568431 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
SIN3A-211ENST00000568431 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
SIN3A-211ENST00000568431 GRIN2AQ12879 1464 aa13.83□□□□□ -0.2
SIN3A-211ENST00000568431 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
SIN3A-211ENST00000568431 NUP160Q12769 1436 aa13.77□□□□□ -0.21
SIN3A-211ENST00000568431 TOP2BQ02880 1626 aa13.75□□□□□ -0.21
SIN3A-211ENST00000568431 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
SIN3A-211ENST00000568431 ERICH3Q5RHP9 1530 aa13.7□□□□□ -0.22
SIN3A-211ENST00000568431 TSPOAP1O95153 1857 aa13.7□□□□□ -0.22
SIN3A-211ENST00000568431 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
SIN3A-211ENST00000568431 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
SIN3A-211ENST00000568431 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms