RNA–Protein interactions for RNA: ENST00000568309.5

SIN3A-210, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-210ENST00000568309 NISCHQ9Y2I1 1504 aa20.91■□□□□ 0.94
SIN3A-210ENST00000568309 ABCC9O60706 1549 aa19.82■□□□□ 0.76
SIN3A-210ENST00000568309 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
SIN3A-210ENST00000568309 CCDC180Q9P1Z9 1646 aa19.12■□□□□ 0.65
SIN3A-210ENST00000568309 RB1CC1Q8TDY2 1594 aa18.56■□□□□ 0.56
SIN3A-210ENST00000568309 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
SIN3A-210ENST00000568309 DNAJC5Q9H3Z4 198 aa18.31■□□□□ 0.52
SIN3A-210ENST00000568309 NACADO15069 1562 aa18.25■□□□□ 0.51
SIN3A-210ENST00000568309 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
SIN3A-210ENST00000568309 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
SIN3A-210ENST00000568309 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
SIN3A-210ENST00000568309 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
SIN3A-210ENST00000568309 CC2D2AQ9P2K1 1620 aa17.89■□□□□ 0.45
SIN3A-210ENST00000568309 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
SIN3A-210ENST00000568309 SHROOM4Q9ULL8 1493 aa17.77■□□□□ 0.44
SIN3A-210ENST00000568309 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
SIN3A-210ENST00000568309 CUX2O14529 1486 aa17.45■□□□□ 0.38
SIN3A-210ENST00000568309 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
SIN3A-210ENST00000568309 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
SIN3A-210ENST00000568309 ERCC6Q03468 1493 aa17.17■□□□□ 0.34
SIN3A-210ENST00000568309 ZCCHC6Q5VYS8 1495 aaKnown RBP17.17■□□□□ 0.34
SIN3A-210ENST00000568309 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
SIN3A-210ENST00000568309 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
SIN3A-210ENST00000568309 THOC2Q8NI27 1593 aaKnown RBP16.83■□□□□ 0.28
SIN3A-210ENST00000568309 NESP48681 1621 aa16.81■□□□□ 0.28
SIN3A-210ENST00000568309 ATAD2BQ9ULI0 1458 aa16.69■□□□□ 0.26
SIN3A-210ENST00000568309 HMGXB3Q12766 1538 aa16.67■□□□□ 0.26
SIN3A-210ENST00000568309 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
SIN3A-210ENST00000568309 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
SIN3A-210ENST00000568309 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
SIN3A-210ENST00000568309 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
SIN3A-210ENST00000568309 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
SIN3A-210ENST00000568309 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
SIN3A-210ENST00000568309 SMARCA4P51532 1647 aa16.48■□□□□ 0.23
SIN3A-210ENST00000568309 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
SIN3A-210ENST00000568309 WDR62O43379 1518 aa16.43■□□□□ 0.22
SIN3A-210ENST00000568309 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
SIN3A-210ENST00000568309 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
SIN3A-210ENST00000568309 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
SIN3A-210ENST00000568309 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
SIN3A-210ENST00000568309 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
SIN3A-210ENST00000568309 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
SIN3A-210ENST00000568309 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
SIN3A-210ENST00000568309 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
SIN3A-210ENST00000568309 CEP164Q9UPV0 1460 aa16.2■□□□□ 0.18
SIN3A-210ENST00000568309 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
SIN3A-210ENST00000568309 CYB5RLQ6IPT4 315 aa16.14■□□□□ 0.17
SIN3A-210ENST00000568309 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
SIN3A-210ENST00000568309 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
SIN3A-210ENST00000568309 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
SIN3A-210ENST00000568309 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
SIN3A-210ENST00000568309 CFTRP13569 1480 aa15.96■□□□□ 0.14
SIN3A-210ENST00000568309 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
SIN3A-210ENST00000568309 IFT140Q96RY7 1462 aa15.92■□□□□ 0.14
SIN3A-210ENST00000568309 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
SIN3A-210ENST00000568309 WIZO95785 1651 aa15.85■□□□□ 0.13
SIN3A-210ENST00000568309 CHD1O14646 1710 aa15.85■□□□□ 0.13
SIN3A-210ENST00000568309 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.12
SIN3A-210ENST00000568309 ILDR1Q86SU0 546 aaPredicted RBP15.75■□□□□ 0.11
SIN3A-210ENST00000568309 PRDM2Q13029 1718 aa15.73■□□□□ 0.11
SIN3A-210ENST00000568309 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
SIN3A-210ENST00000568309 FBLN2P98095 1184 aa15.72■□□□□ 0.11
SIN3A-210ENST00000568309 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.1
SIN3A-210ENST00000568309 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
SIN3A-210ENST00000568309 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
SIN3A-210ENST00000568309 ABCC8Q09428 1581 aa15.65■□□□□ 0.1
SIN3A-210ENST00000568309 TOP2AP11388 1531 aaKnown RBP15.62■□□□□ 0.09
SIN3A-210ENST00000568309 DNMBPQ6XZF7 1577 aa15.6■□□□□ 0.09
SIN3A-210ENST00000568309 SYNJ1O43426 1573 aa15.59■□□□□ 0.09
SIN3A-210ENST00000568309 GAPVD1Q14C86 1478 aa15.56■□□□□ 0.08
SIN3A-210ENST00000568309 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.08
SIN3A-210ENST00000568309 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.07
SIN3A-210ENST00000568309 CHMP7Q8WUX9 453 aaPredicted RBP15.5■□□□□ 0.07
SIN3A-210ENST00000568309 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
SIN3A-210ENST00000568309 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
SIN3A-210ENST00000568309 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
SIN3A-210ENST00000568309 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.06
SIN3A-210ENST00000568309 CCDC88BA6NC98 1476 aa15.44■□□□□ 0.06
SIN3A-210ENST00000568309 KDM4FA0A1W2PPD8 638 aa15.43■□□□□ 0.06
SIN3A-210ENST00000568309 SYNJ2O15056 1496 aa15.43■□□□□ 0.06
SIN3A-210ENST00000568309 KIF13AQ9H1H9 1805 aa15.43■□□□□ 0.06
SIN3A-210ENST00000568309 SOGA1O94964 1423 aa15.42■□□□□ 0.06
SIN3A-210ENST00000568309 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
SIN3A-210ENST00000568309 ERCC6L2Q5T890 1561 aa15.36■□□□□ 0.05
SIN3A-210ENST00000568309 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
SIN3A-210ENST00000568309 CEP170Q5SW79 1584 aa15.26■□□□□ 0.03
SIN3A-210ENST00000568309 PBRM1Q86U86 1689 aa15.25■□□□□ 0.03
SIN3A-210ENST00000568309 ABCC10Q5T3U5 1492 aa15.25■□□□□ 0.03
SIN3A-210ENST00000568309 KDM6BO15054 1643 aa15.25■□□□□ 0.03
SIN3A-210ENST00000568309 FAM69CQ0P6D2 419 aa15.23■□□□□ 0.03
SIN3A-210ENST00000568309 SHROOM2Q13796 1616 aa15.21■□□□□ 0.02
SIN3A-210ENST00000568309 GRIN2AQ12879 1464 aa15.19■□□□□ 0.02
SIN3A-210ENST00000568309 NUP160Q12769 1436 aa15.18■□□□□ 0.02
SIN3A-210ENST00000568309 DIP2BQ9P265 1576 aa15.18■□□□□ 0.02
SIN3A-210ENST00000568309 HECW2Q9P2P5 1572 aa15.18■□□□□ 0.02
SIN3A-210ENST00000568309 MAPKBP1O60336 1514 aa15.17■□□□□ 0.02
SIN3A-210ENST00000568309 CUX1P39880 1505 aa15.16■□□□□ 0.02
SIN3A-210ENST00000568309 ABCA5Q8WWZ7 1642 aa15.15■□□□□ 0.02
SIN3A-210ENST00000568309 FBXO41Q8TF61 875 aa15.13■□□□□ 0.01
SIN3A-210ENST00000568309 ADGRL1O94910 1474 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms